RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 MYOM1P52179 1685 aa13.32□□□□□ -0.28
ITGA6-210ENST00000475302 MAMSTRQ6ZN01 415 aa13.32□□□□□ -0.28
ITGA6-210ENST00000475302 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
ITGA6-210ENST00000475302 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
ITGA6-210ENST00000475302 SLIT1O75093 1534 aa13.32□□□□□ -0.28
ITGA6-210ENST00000475302 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
ITGA6-210ENST00000475302 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
ITGA6-210ENST00000475302 MED14O60244 1454 aa13.31□□□□□ -0.28
ITGA6-210ENST00000475302 PUS7Q96PZ0 661 aaKnown RBP13.31□□□□□ -0.28
ITGA6-210ENST00000475302 SCUBE2Q9NQ36 999 aa13.31□□□□□ -0.28
ITGA6-210ENST00000475302 TRAK1Q9UPV9 953 aa13.31□□□□□ -0.28
ITGA6-210ENST00000475302 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
ITGA6-210ENST00000475302 DLC1Q96QB1 1528 aa13.3□□□□□ -0.28
ITGA6-210ENST00000475302 CCDC184Q52MB2 194 aa13.3□□□□□ -0.28
ITGA6-210ENST00000475302 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
ITGA6-210ENST00000475302 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
ITGA6-210ENST00000475302 SOX12O15370 315 aa13.29□□□□□ -0.28
ITGA6-210ENST00000475302 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
ITGA6-210ENST00000475302 PANK3Q9H999 370 aa13.29□□□□□ -0.28
ITGA6-210ENST00000475302 LRPPRCP42704 1394 aaKnown RBP13.29□□□□□ -0.28
ITGA6-210ENST00000475302 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
ITGA6-210ENST00000475302 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
ITGA6-210ENST00000475302 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
ITGA6-210ENST00000475302 LTKP29376 864 aa13.28□□□□□ -0.28
ITGA6-210ENST00000475302 MS4A4AQ96JQ5 239 aa13.28□□□□□ -0.28
ITGA6-210ENST00000475302 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
ITGA6-210ENST00000475302 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
ITGA6-210ENST00000475302 METP08581 1390 aa13.27□□□□□ -0.29
ITGA6-210ENST00000475302 PARD3Q8TEW0 1356 aa13.27□□□□□ -0.29
ITGA6-210ENST00000475302 PLEKHG1Q9ULL1 1385 aa13.27□□□□□ -0.29
ITGA6-210ENST00000475302 TECPR2O15040 1411 aa13.27□□□□□ -0.29
ITGA6-210ENST00000475302 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
ITGA6-210ENST00000475302 SIRT1Q96EB6 747 aa13.26□□□□□ -0.29
ITGA6-210ENST00000475302 NPC1L1Q9UHC9 1359 aa13.25□□□□□ -0.29
ITGA6-210ENST00000475302 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
ITGA6-210ENST00000475302 MFRPQ9BY79 579 aa13.25□□□□□ -0.29
ITGA6-210ENST00000475302 RALBP1Q15311 655 aa13.24□□□□□ -0.29
ITGA6-210ENST00000475302 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
ITGA6-210ENST00000475302 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
ITGA6-210ENST00000475302 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
ITGA6-210ENST00000475302 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
ITGA6-210ENST00000475302 CARD14Q9BXL6 1004 aa13.23□□□□□ -0.29
ITGA6-210ENST00000475302 ZNF142P52746 1687 aaPredicted RBP13.22□□□□□ -0.29
ITGA6-210ENST00000475302 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
ITGA6-210ENST00000475302 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
ITGA6-210ENST00000475302 STK26Q9P289 416 aa13.22□□□□□ -0.29
ITGA6-210ENST00000475302 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
ITGA6-210ENST00000475302 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
ITGA6-210ENST00000475302 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
ITGA6-210ENST00000475302 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
ITGA6-210ENST00000475302 CPS1P31327 1500 aa13.21□□□□□ -0.29
ITGA6-210ENST00000475302 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
ITGA6-210ENST00000475302 NLRP6P59044 892 aa13.2□□□□□ -0.3
ITGA6-210ENST00000475302 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
ITGA6-210ENST00000475302 TBX22Q9Y458 520 aa13.2□□□□□ -0.3
ITGA6-210ENST00000475302 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
ITGA6-210ENST00000475302 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
ITGA6-210ENST00000475302 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
ITGA6-210ENST00000475302 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
ITGA6-210ENST00000475302 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
ITGA6-210ENST00000475302 BRD4O60885 1362 aaPredicted RBP13.18□□□□□ -0.3
ITGA6-210ENST00000475302 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
ITGA6-210ENST00000475302 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
ITGA6-210ENST00000475302 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
ITGA6-210ENST00000475302 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
ITGA6-210ENST00000475302 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
ITGA6-210ENST00000475302 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
ITGA6-210ENST00000475302 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
ITGA6-210ENST00000475302 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
ITGA6-210ENST00000475302 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
ITGA6-210ENST00000475302 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
ITGA6-210ENST00000475302 NINLQ9Y2I6 1382 aa13.16□□□□□ -0.3
ITGA6-210ENST00000475302 POGKQ9P215 609 aa13.15□□□□□ -0.3
ITGA6-210ENST00000475302 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
ITGA6-210ENST00000475302 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
ITGA6-210ENST00000475302 G3V3G9 751 aa13.14□□□□□ -0.31
ITGA6-210ENST00000475302 SAFB2Q14151 953 aaKnown RBP eCLIP13.14□□□□□ -0.31
ITGA6-210ENST00000475302 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
ITGA6-210ENST00000475302 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
ITGA6-210ENST00000475302 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
ITGA6-210ENST00000475302 CDK19Q9BWU1 502 aa13.14□□□□□ -0.31
ITGA6-210ENST00000475302 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
ITGA6-210ENST00000475302 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
ITGA6-210ENST00000475302 ADGRB2O60241 1585 aa13.13□□□□□ -0.31
ITGA6-210ENST00000475302 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
ITGA6-210ENST00000475302 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
ITGA6-210ENST00000475302 TMEM121BQ9BXQ6 578 aaPredicted RBP13.13□□□□□ -0.31
ITGA6-210ENST00000475302 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
ITGA6-210ENST00000475302 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
ITGA6-210ENST00000475302 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
ITGA6-210ENST00000475302 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
ITGA6-210ENST00000475302 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
ITGA6-210ENST00000475302 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
ITGA6-210ENST00000475302 INSRP06213 1382 aa13.1□□□□□ -0.31
ITGA6-210ENST00000475302 NSD3Q9BZ95 1437 aa13.1□□□□□ -0.31
ITGA6-210ENST00000475302 A0A1W2PP64 1363 aa13.09□□□□□ -0.31
ITGA6-210ENST00000475302 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
ITGA6-210ENST00000475302 TMC1Q8TDI8 760 aa13.09□□□□□ -0.31
ITGA6-210ENST00000475302 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
ITGA6-210ENST00000475302 CPSF1Q10570 1443 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms