RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
PCCB-213ENST00000475214 WDR43Q15061 677 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCCB-213ENST00000475214 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
PCCB-213ENST00000475214 LRP6O75581 1613 aa13.64□□□□□ -0.23
PCCB-213ENST00000475214 AHDC1Q5TGY3 1603 aaPredicted RBP13.64□□□□□ -0.23
PCCB-213ENST00000475214 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
PCCB-213ENST00000475214 CPSF1Q10570 1443 aaKnown RBP13.63□□□□□ -0.23
PCCB-213ENST00000475214 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
PCCB-213ENST00000475214 ANKRD26Q9UPS8 1709 aa13.62□□□□□ -0.23
PCCB-213ENST00000475214 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
PCCB-213ENST00000475214 FYB1O15117 783 aa13.62□□□□□ -0.23
PCCB-213ENST00000475214 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
PCCB-213ENST00000475214 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
PCCB-213ENST00000475214 KIF20BQ96Q89 1820 aa13.62□□□□□ -0.23
PCCB-213ENST00000475214 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
PCCB-213ENST00000475214 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
PCCB-213ENST00000475214 GGNBP2Q9H3C7 697 aa13.61□□□□□ -0.23
PCCB-213ENST00000475214 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
PCCB-213ENST00000475214 EDC4Q6P2E9 1401 aaKnown RBP13.61□□□□□ -0.23
PCCB-213ENST00000475214 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
PCCB-213ENST00000475214 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
PCCB-213ENST00000475214 PRR36Q9H6K5 1346 aa13.61□□□□□ -0.23
PCCB-213ENST00000475214 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
PCCB-213ENST00000475214 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
PCCB-213ENST00000475214 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
PCCB-213ENST00000475214 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
PCCB-213ENST00000475214 PLEKHG3A1L390 1219 aa13.59□□□□□ -0.23
PCCB-213ENST00000475214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCCB-213ENST00000475214 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
PCCB-213ENST00000475214 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
PCCB-213ENST00000475214 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
PCCB-213ENST00000475214 MST1RQ04912 1400 aa13.58□□□□□ -0.24
PCCB-213ENST00000475214 MTHFSP49914 203 aa13.58□□□□□ -0.24
PCCB-213ENST00000475214 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
PCCB-213ENST00000475214 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
PCCB-213ENST00000475214 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
PCCB-213ENST00000475214 UPF1Q92900 1129 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCCB-213ENST00000475214 ACEP12821 1306 aa13.56□□□□□ -0.24
PCCB-213ENST00000475214 NEFLP07196 543 aa13.55□□□□□ -0.24
PCCB-213ENST00000475214 FMN2Q9NZ56 1722 aa13.54□□□□□ -0.24
PCCB-213ENST00000475214 COG3Q96JB2 828 aa13.54□□□□□ -0.24
PCCB-213ENST00000475214 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
PCCB-213ENST00000475214 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
PCCB-213ENST00000475214 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
PCCB-213ENST00000475214 RXRBP28702 533 aa13.53□□□□□ -0.24
PCCB-213ENST00000475214 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
PCCB-213ENST00000475214 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
PCCB-213ENST00000475214 SALL2Q9Y467 1007 aaPredicted RBP13.53□□□□□ -0.24
PCCB-213ENST00000475214 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
PCCB-213ENST00000475214 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
PCCB-213ENST00000475214 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
PCCB-213ENST00000475214 NME9Q86XW9 330 aa13.52□□□□□ -0.25
PCCB-213ENST00000475214 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
PCCB-213ENST00000475214 TTC21BQ7Z4L5 1316 aa13.52□□□□□ -0.25
PCCB-213ENST00000475214 USP6P35125 1406 aa13.52□□□□□ -0.25
PCCB-213ENST00000475214 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
PCCB-213ENST00000475214 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
PCCB-213ENST00000475214 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
PCCB-213ENST00000475214 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
PCCB-213ENST00000475214 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
PCCB-213ENST00000475214 PMFBP1Q8TBY8 1022 aa13.51□□□□□ -0.25
PCCB-213ENST00000475214 NRKQ7Z2Y5 1582 aa13.5□□□□□ -0.25
PCCB-213ENST00000475214 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
PCCB-213ENST00000475214 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
PCCB-213ENST00000475214 AFF2P51816 1311 aa13.49□□□□□ -0.25
PCCB-213ENST00000475214 CCDC146Q8IYE0 955 aa13.49□□□□□ -0.25
PCCB-213ENST00000475214 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
PCCB-213ENST00000475214 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
PCCB-213ENST00000475214 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
PCCB-213ENST00000475214 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
PCCB-213ENST00000475214 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 SOS2Q07890 1332 aaPredicted RBP13.47□□□□□ -0.25
PCCB-213ENST00000475214 APAF1O14727 1248 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
PCCB-213ENST00000475214 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCCB-213ENST00000475214 FKBP8Q14318 412 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 ORAI2Q96SN7 254 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
PCCB-213ENST00000475214 POLKQ9UBT6 870 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 PHF8Q9UPP1 1060 aa13.47□□□□□ -0.25
PCCB-213ENST00000475214 COL3A1P02461 1466 aaPredicted RBP13.47□□□□□ -0.25
PCCB-213ENST00000475214 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.25
PCCB-213ENST00000475214 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
PCCB-213ENST00000475214 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
PCCB-213ENST00000475214 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
PCCB-213ENST00000475214 RGS12O14924 1447 aa13.45□□□□□ -0.26
PCCB-213ENST00000475214 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
PCCB-213ENST00000475214 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
PCCB-213ENST00000475214 C8orf37Q96NL8 207 aa13.44□□□□□ -0.26
PCCB-213ENST00000475214 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
PCCB-213ENST00000475214 FBLN1P23142 703 aa13.43□□□□□ -0.26
PCCB-213ENST00000475214 RBM6P78332 1123 aaKnown RBP13.43□□□□□ -0.26
PCCB-213ENST00000475214 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
PCCB-213ENST00000475214 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
PCCB-213ENST00000475214 QTRT2Q9H974 415 aaKnown RBP13.43□□□□□ -0.26
PCCB-213ENST00000475214 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
PCCB-213ENST00000475214 ZNF521Q96K83 1311 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms