RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
SPCS1-204ENST00000474945 PLCH1Q4KWH8 1693 aa19.46■□□□□ 0.71
SPCS1-204ENST00000474945 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
SPCS1-204ENST00000474945 CCDC61Q9Y6R9 512 aa19.45■□□□□ 0.7
SPCS1-204ENST00000474945 SLIT2O94813 1529 aa19.45■□□□□ 0.7
SPCS1-204ENST00000474945 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
SPCS1-204ENST00000474945 ACEP12821 1306 aa19.43■□□□□ 0.7
SPCS1-204ENST00000474945 CRYBG1Q9Y4K1 1723 aa19.42■□□□□ 0.7
SPCS1-204ENST00000474945 CARD11Q9BXL7 1154 aa19.41■□□□□ 0.7
SPCS1-204ENST00000474945 EVC2Q86UK5 1308 aa19.41■□□□□ 0.7
SPCS1-204ENST00000474945 NWD2Q9ULI1 1742 aa19.4■□□□□ 0.7
SPCS1-204ENST00000474945 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
SPCS1-204ENST00000474945 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
SPCS1-204ENST00000474945 PLEKHG3A1L390 1219 aa19.39■□□□□ 0.69
SPCS1-204ENST00000474945 COL14A1Q05707 1796 aaKnown RBP19.37■□□□□ 0.69
SPCS1-204ENST00000474945 GLI3P10071 1580 aa19.37■□□□□ 0.69
SPCS1-204ENST00000474945 NUTM2GQ5VZR2 741 aa19.37■□□□□ 0.69
SPCS1-204ENST00000474945 GJD4Q96KN9 370 aaPredicted RBP19.36■□□□□ 0.69
SPCS1-204ENST00000474945 NRAPQ86VF7 1730 aa19.36■□□□□ 0.69
SPCS1-204ENST00000474945 NRKQ7Z2Y5 1582 aa19.36■□□□□ 0.69
SPCS1-204ENST00000474945 CCDC9Q9Y3X0 531 aaKnown RBP19.35■□□□□ 0.69
SPCS1-204ENST00000474945 USP6P35125 1406 aa19.34■□□□□ 0.69
SPCS1-204ENST00000474945 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
SPCS1-204ENST00000474945 SBNO2Q9Y2G9 1366 aa19.34■□□□□ 0.69
SPCS1-204ENST00000474945 FAM83GA6ND36 823 aa19.34■□□□□ 0.69
SPCS1-204ENST00000474945 UPF1Q92900 1129 aaKnown RBP eCLIP19.34■□□□□ 0.69
SPCS1-204ENST00000474945 PRDM11Q9NQV5 511 aa19.34■□□□□ 0.69
SPCS1-204ENST00000474945 CABP1Q9NZU7 370 aa19.34■□□□□ 0.69
SPCS1-204ENST00000474945 ABTB2Q8N961 1025 aa19.33■□□□□ 0.68
SPCS1-204ENST00000474945 KIAA0232Q92628 1395 aa19.32■□□□□ 0.68
SPCS1-204ENST00000474945 VPS72Q15906 364 aa19.32■□□□□ 0.68
SPCS1-204ENST00000474945 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
SPCS1-204ENST00000474945 BTG4Q9NY30 223 aa19.32■□□□□ 0.68
SPCS1-204ENST00000474945 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
SPCS1-204ENST00000474945 USP19O94966 1318 aa19.29■□□□□ 0.68
SPCS1-204ENST00000474945 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
SPCS1-204ENST00000474945 PIK3C2AO00443 1686 aa19.27■□□□□ 0.68
SPCS1-204ENST00000474945 AKAP12Q02952 1782 aa19.27■□□□□ 0.68
SPCS1-204ENST00000474945 A0A0G2JS52 829 aa19.27■□□□□ 0.68
SPCS1-204ENST00000474945 MYT1Q01538 1121 aa19.27■□□□□ 0.68
SPCS1-204ENST00000474945 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
SPCS1-204ENST00000474945 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
SPCS1-204ENST00000474945 SSH2Q76I76 1423 aa19.25■□□□□ 0.67
SPCS1-204ENST00000474945 SEPT12Q8IYM1 358 aa19.24■□□□□ 0.67
SPCS1-204ENST00000474945 SLIT3O75094 1523 aa19.24■□□□□ 0.67
SPCS1-204ENST00000474945 CLSPNQ9HAW4 1339 aa19.24■□□□□ 0.67
SPCS1-204ENST00000474945 MON2Q7Z3U7 1717 aa19.23■□□□□ 0.67
SPCS1-204ENST00000474945 CPDO75976 1380 aa19.23■□□□□ 0.67
SPCS1-204ENST00000474945 KTN1Q86UP2 1357 aaKnown RBP19.23■□□□□ 0.67
SPCS1-204ENST00000474945 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
SPCS1-204ENST00000474945 NLRP6P59044 892 aa19.23■□□□□ 0.67
SPCS1-204ENST00000474945 STRN4Q9NRL3 753 aa19.23■□□□□ 0.67
SPCS1-204ENST00000474945 CPSF1Q10570 1443 aaKnown RBP19.23■□□□□ 0.67
SPCS1-204ENST00000474945 EP400Q96L91 3159 aa19.23■□□□□ 0.67
SPCS1-204ENST00000474945 USP47Q96K76 1375 aa19.22■□□□□ 0.67
SPCS1-204ENST00000474945 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
SPCS1-204ENST00000474945 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
SPCS1-204ENST00000474945 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
SPCS1-204ENST00000474945 LMO7Q8WWI1 1683 aa19.21■□□□□ 0.67
SPCS1-204ENST00000474945 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
SPCS1-204ENST00000474945 ZNF692Q9BU19 519 aaPredicted RBP19.21■□□□□ 0.67
SPCS1-204ENST00000474945 SPATA31A5Q5VU36 1347 aa19.21■□□□□ 0.67
SPCS1-204ENST00000474945 SPATA31A7Q8IWB4 1347 aa19.21■□□□□ 0.67
SPCS1-204ENST00000474945 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
SPCS1-204ENST00000474945 GCP02774 474 aa19.2■□□□□ 0.66
SPCS1-204ENST00000474945 TTC21AQ8NDW8 1320 aa19.2■□□□□ 0.66
SPCS1-204ENST00000474945 CD163L1Q9NR16 1453 aa19.19■□□□□ 0.66
SPCS1-204ENST00000474945 THSD7AQ9UPZ6 1657 aa19.18■□□□□ 0.66
SPCS1-204ENST00000474945 CAMTA1Q9Y6Y1 1673 aa19.18■□□□□ 0.66
SPCS1-204ENST00000474945 TESK2Q96S53 571 aa19.18■□□□□ 0.66
SPCS1-204ENST00000474945 SOX12O15370 315 aa19.17■□□□□ 0.66
SPCS1-204ENST00000474945 EVA1CP58658 441 aa19.17■□□□□ 0.66
SPCS1-204ENST00000474945 KRT27Q7Z3Y8 459 aa19.17■□□□□ 0.66
SPCS1-204ENST00000474945 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
SPCS1-204ENST00000474945 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
SPCS1-204ENST00000474945 COL5A2P05997 1499 aaPredicted RBP19.16■□□□□ 0.66
SPCS1-204ENST00000474945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.16■□□□□ 0.66
SPCS1-204ENST00000474945 SPATA31A1Q5TZJ5 1347 aa19.16■□□□□ 0.66
SPCS1-204ENST00000474945 A0A1W2PP64 1363 aa19.16■□□□□ 0.66
SPCS1-204ENST00000474945 ONECUT3O60422 494 aaPredicted RBP19.15■□□□□ 0.66
SPCS1-204ENST00000474945 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
SPCS1-204ENST00000474945 TIMELESSQ9UNS1 1208 aa19.15■□□□□ 0.66
SPCS1-204ENST00000474945 NINLQ9Y2I6 1382 aa19.15■□□□□ 0.66
SPCS1-204ENST00000474945 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
SPCS1-204ENST00000474945 TERF2IPQ9NYB0 399 aa19.14■□□□□ 0.65
SPCS1-204ENST00000474945 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
SPCS1-204ENST00000474945 EDC4Q6P2E9 1401 aaKnown RBP19.14■□□□□ 0.65
SPCS1-204ENST00000474945 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
SPCS1-204ENST00000474945 LARP1Q6PKG0 1096 aaKnown RBP19.13■□□□□ 0.65
SPCS1-204ENST00000474945 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
SPCS1-204ENST00000474945 NFAT5O94916 1531 aa19.13■□□□□ 0.65
SPCS1-204ENST00000474945 KCNH5Q8NCM2 988 aa19.12■□□□□ 0.65
SPCS1-204ENST00000474945 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
SPCS1-204ENST00000474945 USP54Q70EL1 1684 aa19.11■□□□□ 0.65
SPCS1-204ENST00000474945 TMF1P82094 1093 aa19.11■□□□□ 0.65
SPCS1-204ENST00000474945 NME9Q86XW9 330 aa19.11■□□□□ 0.65
SPCS1-204ENST00000474945 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
SPCS1-204ENST00000474945 CRB1P82279 1406 aa19.09■□□□□ 0.65
SPCS1-204ENST00000474945 USP31Q70CQ4 1352 aa19.09■□□□□ 0.65
SPCS1-204ENST00000474945 SF3B2Q13435 895 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms