RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 TLL2Q9Y6L7 1015 aa13.22□□□□□ -0.29
SENP6-206ENST00000474906 QPCTQ16769 361 aa13.21□□□□□ -0.29
SENP6-206ENST00000474906 LCE2AQ5TA79 106 aaPredicted RBP13.21□□□□□ -0.29
SENP6-206ENST00000474906 TREML4Q6UXN2 200 aa13.21□□□□□ -0.29
SENP6-206ENST00000474906 TRIM47Q96LD4 638 aa13.21□□□□□ -0.29
SENP6-206ENST00000474906 MAP10Q9P2G4 905 aa13.21□□□□□ -0.29
SENP6-206ENST00000474906 SNRPBP14678 240 aaKnown RBP13.2□□□□□ -0.3
SENP6-206ENST00000474906 VARSP26640 1264 aaKnown RBP13.2□□□□□ -0.3
SENP6-206ENST00000474906 TUSC1Q2TAM9 212 aa13.2□□□□□ -0.3
SENP6-206ENST00000474906 SENP2Q9HC62 589 aa13.2□□□□□ -0.3
SENP6-206ENST00000474906 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
SENP6-206ENST00000474906 LILRB3O75022 631 aa13.17□□□□□ -0.3
SENP6-206ENST00000474906 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
SENP6-206ENST00000474906 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
SENP6-206ENST00000474906 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
SENP6-206ENST00000474906 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
SENP6-206ENST00000474906 MPNDQ8N594 471 aa13.16□□□□□ -0.3
SENP6-206ENST00000474906 TSC1Q92574 1164 aa13.16□□□□□ -0.3
SENP6-206ENST00000474906 CLK2P49760 499 aaKnown RBP13.15□□□□□ -0.3
SENP6-206ENST00000474906 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
SENP6-206ENST00000474906 PLEKHG3A1L390 1219 aa13.14□□□□□ -0.31
SENP6-206ENST00000474906 CAPN5O15484 640 aaPredicted RBP13.14□□□□□ -0.31
SENP6-206ENST00000474906 BMP1P13497 986 aa13.13□□□□□ -0.31
SENP6-206ENST00000474906 FOXJ1Q92949 421 aa13.13□□□□□ -0.31
SENP6-206ENST00000474906 WFS1O76024 890 aa13.12□□□□□ -0.31
SENP6-206ENST00000474906 NFX1Q12986 1120 aaKnown RBP13.12□□□□□ -0.31
SENP6-206ENST00000474906 TRIM46Q7Z4K8 759 aa13.12□□□□□ -0.31
SENP6-206ENST00000474906 FAM174AQ8TBP5 190 aa13.12□□□□□ -0.31
SENP6-206ENST00000474906 NNTQ13423 1086 aa13.11□□□□□ -0.31
SENP6-206ENST00000474906 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
SENP6-206ENST00000474906 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
SENP6-206ENST00000474906 HELBQ8NG08 1087 aaPredicted RBP13.09□□□□□ -0.31
SENP6-206ENST00000474906 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
SENP6-206ENST00000474906 ADH1CP00326 375 aa13.07□□□□□ -0.32
SENP6-206ENST00000474906 C4orf48Q5BLP8 95 aa13.07□□□□□ -0.32
SENP6-206ENST00000474906 CDK15Q96Q40 435 aa13.07□□□□□ -0.32
SENP6-206ENST00000474906 AGERQ15109 404 aa13.05□□□□□ -0.32
SENP6-206ENST00000474906 BPHLQ86WA6 291 aaPredicted RBP13.05□□□□□ -0.32
SENP6-206ENST00000474906 TERTO14746 1132 aaKnown RBP13.04□□□□□ -0.32
SENP6-206ENST00000474906 TIMP2P16035 220 aa13.04□□□□□ -0.32
SENP6-206ENST00000474906 ARMC2Q8NEN0 867 aa13.04□□□□□ -0.32
SENP6-206ENST00000474906 WDR4P57081 412 aaKnown RBP13.03□□□□□ -0.32
SENP6-206ENST00000474906 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
SENP6-206ENST00000474906 BCANQ96GW7 911 aa13.03□□□□□ -0.32
SENP6-206ENST00000474906 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
SENP6-206ENST00000474906 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
SENP6-206ENST00000474906 KDM4CQ9H3R0 1056 aa13.02□□□□□ -0.33
SENP6-206ENST00000474906 LCE2CQ5TA81 110 aa13.01□□□□□ -0.33
SENP6-206ENST00000474906 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
SENP6-206ENST00000474906 SH3RF1Q7Z6J0 888 aa13□□□□□ -0.33
SENP6-206ENST00000474906 ZFP42Q96MM3 310 aa13□□□□□ -0.33
SENP6-206ENST00000474906 C1QTNF2Q9BXJ5 285 aa13□□□□□ -0.33
SENP6-206ENST00000474906 SH3D19Q5HYK7 790 aa12.99□□□□□ -0.33
SENP6-206ENST00000474906 MRPL14Q6P1L8 145 aaKnown RBP12.99□□□□□ -0.33
SENP6-206ENST00000474906 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
SENP6-206ENST00000474906 NR3C2P08235 984 aa12.98□□□□□ -0.33
SENP6-206ENST00000474906 GRM5P41594 1212 aa12.98□□□□□ -0.33
SENP6-206ENST00000474906 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
SENP6-206ENST00000474906 NR5A1Q13285 461 aa12.98□□□□□ -0.33
SENP6-206ENST00000474906 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
SENP6-206ENST00000474906 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
SENP6-206ENST00000474906 WIPF1O43516 503 aa12.97□□□□□ -0.33
SENP6-206ENST00000474906 FBXO31Q5XUX0 539 aaPredicted RBP12.97□□□□□ -0.33
SENP6-206ENST00000474906 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
SENP6-206ENST00000474906 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.33
SENP6-206ENST00000474906 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
SENP6-206ENST00000474906 ITPKCQ96DU7 683 aa12.95□□□□□ -0.34
SENP6-206ENST00000474906 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.95□□□□□ -0.34
SENP6-206ENST00000474906 ZFAND3Q9H8U3 227 aa12.95□□□□□ -0.34
SENP6-206ENST00000474906 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
SENP6-206ENST00000474906 MAGEB6P1A0A0J9YX57 407 aa12.94□□□□□ -0.34
SENP6-206ENST00000474906 SCARF1Q14162 830 aa12.94□□□□□ -0.34
SENP6-206ENST00000474906 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
SENP6-206ENST00000474906 PROCA1Q8NCQ7 364 aaPredicted RBP12.94□□□□□ -0.34
SENP6-206ENST00000474906 PURBQ96QR8 312 aaKnown RBP12.94□□□□□ -0.34
SENP6-206ENST00000474906 MAP4K5Q9Y4K4 846 aa12.94□□□□□ -0.34
SENP6-206ENST00000474906 LRRN4Q8WUT4 740 aa12.93□□□□□ -0.34
SENP6-206ENST00000474906 FSHRP23945 695 aa12.92□□□□□ -0.34
SENP6-206ENST00000474906 PPP2R2DQ66LE6 453 aa12.92□□□□□ -0.34
SENP6-206ENST00000474906 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
SENP6-206ENST00000474906 VASH1Q7L8A9 365 aaPredicted RBP12.9□□□□□ -0.34
SENP6-206ENST00000474906 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
SENP6-206ENST00000474906 SLC16A10Q8TF71 515 aa12.9□□□□□ -0.34
SENP6-206ENST00000474906 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
SENP6-206ENST00000474906 FKBPLQ9UIM3 349 aa12.88□□□□□ -0.35
SENP6-206ENST00000474906 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
SENP6-206ENST00000474906 INSM1Q01101 510 aaPredicted RBP12.87□□□□□ -0.35
SENP6-206ENST00000474906 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
SENP6-206ENST00000474906 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
SENP6-206ENST00000474906 VEGFBP49765 207 aa12.86□□□□□ -0.35
SENP6-206ENST00000474906 NR6A1Q15406 480 aa12.86□□□□□ -0.35
SENP6-206ENST00000474906 MEIOBQ8N635 442 aa12.86□□□□□ -0.35
SENP6-206ENST00000474906 SOBPA7XYQ1 873 aa12.85□□□□□ -0.35
SENP6-206ENST00000474906 H3BM21 787 aa12.85□□□□□ -0.35
SENP6-206ENST00000474906 C6orf118Q5T5N4 469 aa12.85□□□□□ -0.35
SENP6-206ENST00000474906 ARHGAP9Q9BRR9 750 aa12.85□□□□□ -0.35
SENP6-206ENST00000474906 AP1G2O75843 785 aa12.84□□□□□ -0.35
SENP6-206ENST00000474906 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
SENP6-206ENST00000474906 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
SENP6-206ENST00000474906 LINC00528Q8N1L1 170 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms