RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TRPM3Q9HCF6 1732 aaPredicted RBP22.87■■□□□ 1.25
SRRT-209ENST00000474896 TULP4Q9NRJ4 1543 aa22.85■■□□□ 1.25
SRRT-209ENST00000474896 ALS2Q96Q42 1657 aa22.84■■□□□ 1.25
SRRT-209ENST00000474896 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
SRRT-209ENST00000474896 HRCP23327 699 aa22.82■■□□□ 1.24
SRRT-209ENST00000474896 PRDM11Q9NQV5 511 aa22.81■■□□□ 1.24
SRRT-209ENST00000474896 COL14A1Q05707 1796 aaKnown RBP22.81■■□□□ 1.24
SRRT-209ENST00000474896 SPATA31A5Q5VU36 1347 aa22.81■■□□□ 1.24
SRRT-209ENST00000474896 SPATA31A7Q8IWB4 1347 aa22.81■■□□□ 1.24
SRRT-209ENST00000474896 NRAPQ86VF7 1730 aa22.8■■□□□ 1.24
SRRT-209ENST00000474896 BAG6P46379 1132 aa22.8■■□□□ 1.24
SRRT-209ENST00000474896 FAM182BQ5T319 152 aa22.79■■□□□ 1.24
SRRT-209ENST00000474896 CDK19Q9BWU1 502 aa22.79■■□□□ 1.24
SRRT-209ENST00000474896 CHRNA2Q15822 529 aa22.76■■□□□ 1.23
SRRT-209ENST00000474896 NUTM2GQ5VZR2 741 aa22.76■■□□□ 1.23
SRRT-209ENST00000474896 EN1Q05925 392 aaPredicted RBP22.75■■□□□ 1.23
SRRT-209ENST00000474896 PSDA5PKW4 1024 aaPredicted RBP22.74■■□□□ 1.23
SRRT-209ENST00000474896 ZC3H6P61129 1189 aaKnown RBP22.74■■□□□ 1.23
SRRT-209ENST00000474896 KIAA0232Q92628 1395 aa22.74■■□□□ 1.23
SRRT-209ENST00000474896 ARHGEF28Q8N1W1 1705 aaKnown RBP22.74■■□□□ 1.23
SRRT-209ENST00000474896 ATP7BP35670 1465 aa22.73■■□□□ 1.23
SRRT-209ENST00000474896 NBPF8Q3BBV2 869 aa22.73■■□□□ 1.23
SRRT-209ENST00000474896 STRN4Q9NRL3 753 aa22.73■■□□□ 1.23
SRRT-209ENST00000474896 CCDC61Q9Y6R9 512 aa22.73■■□□□ 1.23
SRRT-209ENST00000474896 CRYBG1Q9Y4K1 1723 aa22.73■■□□□ 1.23
SRRT-209ENST00000474896 ACEP12821 1306 aa22.72■■□□□ 1.23
SRRT-209ENST00000474896 SPATA31A1Q5TZJ5 1347 aa22.72■■□□□ 1.23
SRRT-209ENST00000474896 ITSN1Q15811 1721 aa22.71■■□□□ 1.23
SRRT-209ENST00000474896 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
SRRT-209ENST00000474896 EVA1CP58658 441 aa22.69■■□□□ 1.22
SRRT-209ENST00000474896 NBPF1Q3BBV0 1214 aa22.69■■□□□ 1.22
SRRT-209ENST00000474896 POLR3AO14802 1390 aaPredicted RBP22.68■■□□□ 1.22
SRRT-209ENST00000474896 ABTB2Q8N961 1025 aa22.68■■□□□ 1.22
SRRT-209ENST00000474896 USP35Q9P2H5 1018 aa22.68■■□□□ 1.22
SRRT-209ENST00000474896 THSD7AQ9UPZ6 1657 aa22.66■■□□□ 1.22
SRRT-209ENST00000474896 FAM196AQ6ZSG2 479 aa22.66■■□□□ 1.22
SRRT-209ENST00000474896 TRIM37O94972 964 aa22.65■■□□□ 1.22
SRRT-209ENST00000474896 RGPD1P0DJD0 1748 aa22.65■■□□□ 1.22
SRRT-209ENST00000474896 EZH2Q15910 746 aaKnown RBP22.64■■□□□ 1.21
SRRT-209ENST00000474896 PHRF1Q9P1Y6 1649 aaKnown RBP22.64■■□□□ 1.21
SRRT-209ENST00000474896 SRPK2P78362 688 aaKnown RBP22.63■■□□□ 1.21
SRRT-209ENST00000474896 R3HDM1Q15032 1099 aaKnown RBP22.63■■□□□ 1.21
SRRT-209ENST00000474896 LRP5O75197 1615 aa22.61■■□□□ 1.21
SRRT-209ENST00000474896 PDE3BQ13370 1112 aa22.61■■□□□ 1.21
SRRT-209ENST00000474896 LARP1Q6PKG0 1096 aaKnown RBP22.61■■□□□ 1.21
SRRT-209ENST00000474896 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
SRRT-209ENST00000474896 NLRP13Q86W25 1043 aa22.61■■□□□ 1.21
SRRT-209ENST00000474896 CAMKK2Q96RR4 588 aa22.61■■□□□ 1.21
SRRT-209ENST00000474896 CABP2Q9NPB3 220 aa22.61■■□□□ 1.21
SRRT-209ENST00000474896 KIAA1210Q9ULL0 1709 aa22.6■■□□□ 1.21
SRRT-209ENST00000474896 DISP2A7MBM2 1401 aa22.6■■□□□ 1.21
SRRT-209ENST00000474896 APBA3O96018 575 aa22.6■■□□□ 1.21
SRRT-209ENST00000474896 TOPAZ1Q8N9V7 1692 aa22.6■■□□□ 1.21
SRRT-209ENST00000474896 SSH2Q76I76 1423 aa22.59■■□□□ 1.21
SRRT-209ENST00000474896 GCP02774 474 aa22.59■■□□□ 1.21
SRRT-209ENST00000474896 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.21
SRRT-209ENST00000474896 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.21
SRRT-209ENST00000474896 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.2
SRRT-209ENST00000474896 USP19O94966 1318 aa22.57■■□□□ 1.2
SRRT-209ENST00000474896 PPIP5K1Q6PFW1 1433 aa22.57■■□□□ 1.2
SRRT-209ENST00000474896 CPDO75976 1380 aa22.57■■□□□ 1.2
SRRT-209ENST00000474896 TNS1Q9HBL0 1735 aaKnown RBP22.57■■□□□ 1.2
SRRT-209ENST00000474896 CABP1Q9NZU7 370 aa22.55■■□□□ 1.2
SRRT-209ENST00000474896 NRKQ7Z2Y5 1582 aa22.55■■□□□ 1.2
SRRT-209ENST00000474896 THRAP3Q9Y2W1 955 aaKnown RBP22.54■■□□□ 1.2
SRRT-209ENST00000474896 ZBTB7CA1YPR0 619 aa22.53■■□□□ 1.2
SRRT-209ENST00000474896 NLRP6P59044 892 aa22.52■■□□□ 1.2
SRRT-209ENST00000474896 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
SRRT-209ENST00000474896 LMO7Q8WWI1 1683 aa22.5■■□□□ 1.19
SRRT-209ENST00000474896 L3MBTL2Q969R5 705 aa22.5■■□□□ 1.19
SRRT-209ENST00000474896 PARD3Q8TEW0 1356 aa22.5■■□□□ 1.19
SRRT-209ENST00000474896 NBPF14Q5TI25 921 aa22.47■■□□□ 1.19
SRRT-209ENST00000474896 USP6P35125 1406 aa22.47■■□□□ 1.19
SRRT-209ENST00000474896 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
SRRT-209ENST00000474896 QRICH2Q9H0J4 1663 aa22.46■■□□□ 1.19
SRRT-209ENST00000474896 EVC2Q86UK5 1308 aa22.45■■□□□ 1.18
SRRT-209ENST00000474896 CRB1P82279 1406 aa22.45■■□□□ 1.18
SRRT-209ENST00000474896 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
SRRT-209ENST00000474896 TOM1L2Q6ZVM7 507 aa22.44■■□□□ 1.18
SRRT-209ENST00000474896 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
SRRT-209ENST00000474896 C11orf95C9JLR9 678 aaPredicted RBP22.43■■□□□ 1.18
SRRT-209ENST00000474896 AXIN2Q9Y2T1 843 aa22.42■■□□□ 1.18
SRRT-209ENST00000474896 DDB1Q16531 1140 aa22.41■■□□□ 1.18
SRRT-209ENST00000474896 ZNF692Q9BU19 519 aaPredicted RBP22.41■■□□□ 1.18
SRRT-209ENST00000474896 PARP4Q9UKK3 1724 aaKnown RBP22.4■■□□□ 1.18
SRRT-209ENST00000474896 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
SRRT-209ENST00000474896 RREB1Q92766 1687 aa22.39■■□□□ 1.18
SRRT-209ENST00000474896 SLIT3O75094 1523 aa22.39■■□□□ 1.17
SRRT-209ENST00000474896 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
SRRT-209ENST00000474896 NUP188Q5SRE5 1749 aa22.37■■□□□ 1.17
SRRT-209ENST00000474896 SOX12O15370 315 aa22.37■■□□□ 1.17
SRRT-209ENST00000474896 ARHGEF25Q86VW2 580 aa22.37■■□□□ 1.17
SRRT-209ENST00000474896 OVOS2A0A0G2JMS6 1433 aa22.37■■□□□ 1.17
SRRT-209ENST00000474896 OVOS2A0A0J9YW53 1432 aa22.37■■□□□ 1.17
SRRT-209ENST00000474896 OVOS2Q6IE36 1432 aa22.37■■□□□ 1.17
SRRT-209ENST00000474896 WDR17Q8IZU2 1322 aa22.36■■□□□ 1.17
SRRT-209ENST00000474896 PLSCR1O15162 318 aa22.36■■□□□ 1.17
SRRT-209ENST00000474896 KCNH5Q8NCM2 988 aa22.36■■□□□ 1.17
SRRT-209ENST00000474896 ROCK2O75116 1388 aaKnown RBP22.36■■□□□ 1.17
SRRT-209ENST00000474896 PIK3C2AO00443 1686 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms