RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
ARPC1B-216ENST00000474880 UNC5CLQ8IV45 518 aa15.76■□□□□ 0.11
ARPC1B-216ENST00000474880 CCDC61Q9Y6R9 512 aa15.76■□□□□ 0.11
ARPC1B-216ENST00000474880 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
ARPC1B-216ENST00000474880 GLI3P10071 1580 aa15.75■□□□□ 0.11
ARPC1B-216ENST00000474880 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
ARPC1B-216ENST00000474880 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
ARPC1B-216ENST00000474880 RALGAPBQ86X10 1494 aa15.75■□□□□ 0.11
ARPC1B-216ENST00000474880 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
ARPC1B-216ENST00000474880 ACEP12821 1306 aa15.74■□□□□ 0.11
ARPC1B-216ENST00000474880 PLEKHG3A1L390 1219 aa15.74■□□□□ 0.11
ARPC1B-216ENST00000474880 FAM83GA6ND36 823 aa15.74■□□□□ 0.11
ARPC1B-216ENST00000474880 GJD4Q96KN9 370 aaPredicted RBP15.74■□□□□ 0.11
ARPC1B-216ENST00000474880 CARD11Q9BXL7 1154 aa15.74■□□□□ 0.11
ARPC1B-216ENST00000474880 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
ARPC1B-216ENST00000474880 SRPK2P78362 688 aaKnown RBP15.73■□□□□ 0.11
ARPC1B-216ENST00000474880 CABP2Q9NPB3 220 aa15.73■□□□□ 0.11
ARPC1B-216ENST00000474880 TIMELESSQ9UNS1 1208 aa15.73■□□□□ 0.11
ARPC1B-216ENST00000474880 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
ARPC1B-216ENST00000474880 PHRF1Q9P1Y6 1649 aaKnown RBP15.72■□□□□ 0.11
ARPC1B-216ENST00000474880 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
ARPC1B-216ENST00000474880 VPS72Q15906 364 aa15.69■□□□□ 0.1
ARPC1B-216ENST00000474880 NUTM2GQ5VZR2 741 aa15.69■□□□□ 0.1
ARPC1B-216ENST00000474880 EP400Q96L91 3159 aa15.69■□□□□ 0.1
ARPC1B-216ENST00000474880 EVC2Q86UK5 1308 aa15.68■□□□□ 0.1
ARPC1B-216ENST00000474880 ATAD2Q6PL18 1390 aa15.68■□□□□ 0.1
ARPC1B-216ENST00000474880 BTG4Q9NY30 223 aa15.67■□□□□ 0.1
ARPC1B-216ENST00000474880 CABP1Q9NZU7 370 aa15.67■□□□□ 0.1
ARPC1B-216ENST00000474880 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
ARPC1B-216ENST00000474880 CCDC9Q9Y3X0 531 aaKnown RBP15.66■□□□□ 0.1
ARPC1B-216ENST00000474880 KIAA0232Q92628 1395 aa15.65■□□□□ 0.1
ARPC1B-216ENST00000474880 SBNO2Q9Y2G9 1366 aa15.65■□□□□ 0.1
ARPC1B-216ENST00000474880 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
ARPC1B-216ENST00000474880 PRDM11Q9NQV5 511 aa15.65■□□□□ 0.1
ARPC1B-216ENST00000474880 ONECUT3O60422 494 aaPredicted RBP15.64■□□□□ 0.09
ARPC1B-216ENST00000474880 ZC3H6P61129 1189 aaKnown RBP15.64■□□□□ 0.09
ARPC1B-216ENST00000474880 NRKQ7Z2Y5 1582 aa15.64■□□□□ 0.09
ARPC1B-216ENST00000474880 USP6P35125 1406 aa15.63■□□□□ 0.09
ARPC1B-216ENST00000474880 CHRNA2Q15822 529 aa15.63■□□□□ 0.09
ARPC1B-216ENST00000474880 SEPT12Q8IYM1 358 aa15.63■□□□□ 0.09
ARPC1B-216ENST00000474880 USP19O94966 1318 aa15.63■□□□□ 0.09
ARPC1B-216ENST00000474880 PIK3C2AO00443 1686 aa15.62■□□□□ 0.09
ARPC1B-216ENST00000474880 BRD4O60885 1362 aaPredicted RBP15.62■□□□□ 0.09
ARPC1B-216ENST00000474880 SSH2Q76I76 1423 aa15.61■□□□□ 0.09
ARPC1B-216ENST00000474880 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
ARPC1B-216ENST00000474880 NLRP13Q86W25 1043 aa15.6■□□□□ 0.09
ARPC1B-216ENST00000474880 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
ARPC1B-216ENST00000474880 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
ARPC1B-216ENST00000474880 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
ARPC1B-216ENST00000474880 GCP02774 474 aa15.59■□□□□ 0.09
ARPC1B-216ENST00000474880 FAM98CQ17RN3 349 aaKnown RBP15.59■□□□□ 0.09
ARPC1B-216ENST00000474880 CAMTA1Q9Y6Y1 1673 aa15.59■□□□□ 0.09
ARPC1B-216ENST00000474880 MON2Q7Z3U7 1717 aa15.59■□□□□ 0.09
ARPC1B-216ENST00000474880 CPDO75976 1380 aa15.59■□□□□ 0.09
ARPC1B-216ENST00000474880 USP47Q96K76 1375 aa15.59■□□□□ 0.09
ARPC1B-216ENST00000474880 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
ARPC1B-216ENST00000474880 SLIT3O75094 1523 aa15.58■□□□□ 0.08
ARPC1B-216ENST00000474880 THSD7AQ9UPZ6 1657 aa15.57■□□□□ 0.08
ARPC1B-216ENST00000474880 NLRP6P59044 892 aa15.57■□□□□ 0.08
ARPC1B-216ENST00000474880 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
ARPC1B-216ENST00000474880 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
ARPC1B-216ENST00000474880 STRN4Q9NRL3 753 aa15.57■□□□□ 0.08
ARPC1B-216ENST00000474880 CPSF1Q10570 1443 aaKnown RBP15.57■□□□□ 0.08
ARPC1B-216ENST00000474880 A0A0G2JS52 829 aa15.56■□□□□ 0.08
ARPC1B-216ENST00000474880 MYT1Q01538 1121 aa15.56■□□□□ 0.08
ARPC1B-216ENST00000474880 CCDC125Q86Z20 511 aa15.56■□□□□ 0.08
ARPC1B-216ENST00000474880 TTC21BQ7Z4L5 1316 aa15.56■□□□□ 0.08
ARPC1B-216ENST00000474880 COL18A1P39060 1754 aa15.56■□□□□ 0.08
ARPC1B-216ENST00000474880 RGPD5Q99666 1765 aa15.56■□□□□ 0.08
ARPC1B-216ENST00000474880 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
ARPC1B-216ENST00000474880 CD163L1Q9NR16 1453 aa15.54■□□□□ 0.08
ARPC1B-216ENST00000474880 BLMP54132 1417 aaPredicted RBP15.54■□□□□ 0.08
ARPC1B-216ENST00000474880 KTN1Q86UP2 1357 aaKnown RBP15.54■□□□□ 0.08
ARPC1B-216ENST00000474880 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
ARPC1B-216ENST00000474880 TESK2Q96S53 571 aa15.54■□□□□ 0.08
ARPC1B-216ENST00000474880 EVA1CP58658 441 aa15.53■□□□□ 0.08
ARPC1B-216ENST00000474880 LARP1Q6PKG0 1096 aaKnown RBP15.53■□□□□ 0.08
ARPC1B-216ENST00000474880 TTC21AQ8NDW8 1320 aa15.52■□□□□ 0.08
ARPC1B-216ENST00000474880 TMF1P82094 1093 aa15.52■□□□□ 0.08
ARPC1B-216ENST00000474880 TMC1Q8TDI8 760 aa15.52■□□□□ 0.08
ARPC1B-216ENST00000474880 COL5A2P05997 1499 aaPredicted RBP15.52■□□□□ 0.07
ARPC1B-216ENST00000474880 ZBTB7CA1YPR0 619 aa15.51■□□□□ 0.07
ARPC1B-216ENST00000474880 FAM182BQ5T319 152 aa15.51■□□□□ 0.07
ARPC1B-216ENST00000474880 SLC12A5Q9H2X9 1139 aa15.51■□□□□ 0.07
ARPC1B-216ENST00000474880 USP35Q9P2H5 1018 aa15.51■□□□□ 0.07
ARPC1B-216ENST00000474880 USP54Q70EL1 1684 aa15.51■□□□□ 0.07
ARPC1B-216ENST00000474880 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
ARPC1B-216ENST00000474880 HDGFL2Q7Z4V5 671 aaPredicted RBP15.5■□□□□ 0.07
ARPC1B-216ENST00000474880 NINLQ9Y2I6 1382 aa15.49■□□□□ 0.07
ARPC1B-216ENST00000474880 NFAT5O94916 1531 aa15.49■□□□□ 0.07
ARPC1B-216ENST00000474880 CDCA8Q53HL2 280 aa15.49■□□□□ 0.07
ARPC1B-216ENST00000474880 DEFB132Q7Z7B7 95 aa15.49■□□□□ 0.07
ARPC1B-216ENST00000474880 ZRANB1Q9UGI0 708 aa15.49■□□□□ 0.07
ARPC1B-216ENST00000474880 RGPD1P0DJD0 1748 aa15.48■□□□□ 0.07
ARPC1B-216ENST00000474880 SOX12O15370 315 aa15.48■□□□□ 0.07
ARPC1B-216ENST00000474880 BARGINQ6ZT62 677 aa15.48■□□□□ 0.07
ARPC1B-216ENST00000474880 ARHGEF25Q86VW2 580 aa15.48■□□□□ 0.07
ARPC1B-216ENST00000474880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.48■□□□□ 0.07
ARPC1B-216ENST00000474880 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
ARPC1B-216ENST00000474880 LTN1O94822 1766 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms