RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
ITGB5-205ENST00000474838 CCDC61Q9Y6R9 512 aa23.25■■□□□ 1.31
ITGB5-205ENST00000474838 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
ITGB5-205ENST00000474838 COL14A1Q05707 1796 aaKnown RBP23.23■■□□□ 1.31
ITGB5-205ENST00000474838 VPS72Q15906 364 aa23.23■■□□□ 1.31
ITGB5-205ENST00000474838 NRAPQ86VF7 1730 aa23.22■■□□□ 1.31
ITGB5-205ENST00000474838 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
ITGB5-205ENST00000474838 FAM83GA6ND36 823 aa23.22■■□□□ 1.31
ITGB5-205ENST00000474838 ACEP12821 1306 aa23.22■■□□□ 1.31
ITGB5-205ENST00000474838 ROCK2O75116 1388 aaKnown RBP23.22■■□□□ 1.31
ITGB5-205ENST00000474838 SRPK2P78362 688 aaKnown RBP23.21■■□□□ 1.31
ITGB5-205ENST00000474838 PHRF1Q9P1Y6 1649 aaKnown RBP23.2■■□□□ 1.3
ITGB5-205ENST00000474838 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
ITGB5-205ENST00000474838 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
ITGB5-205ENST00000474838 CABP2Q9NPB3 220 aa23.16■■□□□ 1.3
ITGB5-205ENST00000474838 BTG4Q9NY30 223 aa23.16■■□□□ 1.3
ITGB5-205ENST00000474838 CCDC9Q9Y3X0 531 aaKnown RBP23.15■■□□□ 1.3
ITGB5-205ENST00000474838 PRDM11Q9NQV5 511 aa23.14■■□□□ 1.29
ITGB5-205ENST00000474838 NRKQ7Z2Y5 1582 aa23.14■■□□□ 1.29
ITGB5-205ENST00000474838 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.29
ITGB5-205ENST00000474838 EVC2Q86UK5 1308 aa23.13■■□□□ 1.29
ITGB5-205ENST00000474838 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
ITGB5-205ENST00000474838 ONECUT3O60422 494 aaPredicted RBP23.12■■□□□ 1.29
ITGB5-205ENST00000474838 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
ITGB5-205ENST00000474838 KIAA0232Q92628 1395 aa23.12■■□□□ 1.29
ITGB5-205ENST00000474838 TONSLQ96HA7 1378 aa23.12■■□□□ 1.29
ITGB5-205ENST00000474838 BRWD3Q6RI45 1802 aa23.11■■□□□ 1.29
ITGB5-205ENST00000474838 NUTM2GQ5VZR2 741 aa23.11■■□□□ 1.29
ITGB5-205ENST00000474838 USP19O94966 1318 aa23.1■■□□□ 1.29
ITGB5-205ENST00000474838 EP400Q96L91 3159 aa23.1■■□□□ 1.29
ITGB5-205ENST00000474838 USP6P35125 1406 aa23.1■■□□□ 1.29
ITGB5-205ENST00000474838 CCDC125Q86Z20 511 aa23.09■■□□□ 1.29
ITGB5-205ENST00000474838 ABTB2Q8N961 1025 aa23.09■■□□□ 1.29
ITGB5-205ENST00000474838 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
ITGB5-205ENST00000474838 SBNO2Q9Y2G9 1366 aa23.07■■□□□ 1.28
ITGB5-205ENST00000474838 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
ITGB5-205ENST00000474838 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
ITGB5-205ENST00000474838 CPDO75976 1380 aa23.06■■□□□ 1.28
ITGB5-205ENST00000474838 BLMP54132 1417 aaPredicted RBP23.06■■□□□ 1.28
ITGB5-205ENST00000474838 ZC3H6P61129 1189 aaKnown RBP23.05■■□□□ 1.28
ITGB5-205ENST00000474838 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
ITGB5-205ENST00000474838 FAM98CQ17RN3 349 aaKnown RBP23.05■■□□□ 1.28
ITGB5-205ENST00000474838 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
ITGB5-205ENST00000474838 THSD7AQ9UPZ6 1657 aa23.04■■□□□ 1.28
ITGB5-205ENST00000474838 A0A0G2JS52 829 aa23.04■■□□□ 1.28
ITGB5-205ENST00000474838 MYT1Q01538 1121 aa23.04■■□□□ 1.28
ITGB5-205ENST00000474838 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
ITGB5-205ENST00000474838 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
ITGB5-205ENST00000474838 SSH2Q76I76 1423 aa23.03■■□□□ 1.28
ITGB5-205ENST00000474838 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
ITGB5-205ENST00000474838 SLIT3O75094 1523 aa23.02■■□□□ 1.28
ITGB5-205ENST00000474838 PIK3C2AO00443 1686 aa23.01■■□□□ 1.27
ITGB5-205ENST00000474838 AKAP12Q02952 1782 aa23■■□□□ 1.27
ITGB5-205ENST00000474838 SPATA31A1Q5TZJ5 1347 aa23■■□□□ 1.27
ITGB5-205ENST00000474838 GCP02774 474 aa22.99■■□□□ 1.27
ITGB5-205ENST00000474838 STRN4Q9NRL3 753 aa22.99■■□□□ 1.27
ITGB5-205ENST00000474838 CAMTA1Q9Y6Y1 1673 aa22.99■■□□□ 1.27
ITGB5-205ENST00000474838 CPSF1Q10570 1443 aaKnown RBP22.98■■□□□ 1.27
ITGB5-205ENST00000474838 NLRP6P59044 892 aa22.97■■□□□ 1.27
ITGB5-205ENST00000474838 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
ITGB5-205ENST00000474838 SF3B2Q13435 895 aaKnown RBP22.95■■□□□ 1.26
ITGB5-205ENST00000474838 COL5A2P05997 1499 aaPredicted RBP22.94■■□□□ 1.26
ITGB5-205ENST00000474838 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
ITGB5-205ENST00000474838 TTC21AQ8NDW8 1320 aa22.94■■□□□ 1.26
ITGB5-205ENST00000474838 EVA1CP58658 441 aa22.94■■□□□ 1.26
ITGB5-205ENST00000474838 MON2Q7Z3U7 1717 aa22.94■■□□□ 1.26
ITGB5-205ENST00000474838 KTN1Q86UP2 1357 aaKnown RBP22.93■■□□□ 1.26
ITGB5-205ENST00000474838 AATKQ6ZMQ8 1374 aa22.91■■□□□ 1.26
ITGB5-205ENST00000474838 LARP1Q6PKG0 1096 aaKnown RBP22.91■■□□□ 1.26
ITGB5-205ENST00000474838 BARGINQ6ZT62 677 aa22.91■■□□□ 1.26
ITGB5-205ENST00000474838 ZRANB1Q9UGI0 708 aa22.91■■□□□ 1.26
ITGB5-205ENST00000474838 USP35Q9P2H5 1018 aa22.9■■□□□ 1.26
ITGB5-205ENST00000474838 RGPD1P0DJD0 1748 aa22.89■■□□□ 1.26
ITGB5-205ENST00000474838 DEFB132Q7Z7B7 95 aa22.89■■□□□ 1.25
ITGB5-205ENST00000474838 CD163L1Q9NR16 1453 aa22.89■■□□□ 1.25
ITGB5-205ENST00000474838 TCP11L2Q8N4U5 519 aa22.88■■□□□ 1.25
ITGB5-205ENST00000474838 CRB1P82279 1406 aa22.88■■□□□ 1.25
ITGB5-205ENST00000474838 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
ITGB5-205ENST00000474838 KCNH5Q8NCM2 988 aa22.87■■□□□ 1.25
ITGB5-205ENST00000474838 NFAT5O94916 1531 aa22.87■■□□□ 1.25
ITGB5-205ENST00000474838 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
ITGB5-205ENST00000474838 COL18A1P39060 1754 aa22.86■■□□□ 1.25
ITGB5-205ENST00000474838 FAM182BQ5T319 152 aa22.86■■□□□ 1.25
ITGB5-205ENST00000474838 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
ITGB5-205ENST00000474838 THRAP3Q9Y2W1 955 aaKnown RBP22.86■■□□□ 1.25
ITGB5-205ENST00000474838 BAG6P46379 1132 aa22.84■■□□□ 1.25
ITGB5-205ENST00000474838 TNS1Q9HBL0 1735 aaKnown RBP22.84■■□□□ 1.25
ITGB5-205ENST00000474838 EDC4Q6P2E9 1401 aaKnown RBP22.83■■□□□ 1.25
ITGB5-205ENST00000474838 ABCC6O95255 1503 aa22.83■■□□□ 1.25
ITGB5-205ENST00000474838 PARP4Q9UKK3 1724 aaKnown RBP22.83■■□□□ 1.25
ITGB5-205ENST00000474838 HDGFL2Q7Z4V5 671 aaPredicted RBP22.83■■□□□ 1.25
ITGB5-205ENST00000474838 ARHGEF25Q86VW2 580 aa22.83■■□□□ 1.25
ITGB5-205ENST00000474838 TMC1Q8TDI8 760 aa22.83■■□□□ 1.25
ITGB5-205ENST00000474838 TESK2Q96S53 571 aa22.83■■□□□ 1.25
ITGB5-205ENST00000474838 USP31Q70CQ4 1352 aa22.83■■□□□ 1.25
ITGB5-205ENST00000474838 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
ITGB5-205ENST00000474838 NINLQ9Y2I6 1382 aa22.82■■□□□ 1.24
ITGB5-205ENST00000474838 ST20-MTHFSA0A0A6YYL1 179 aa22.82■■□□□ 1.24
ITGB5-205ENST00000474838 A0A1W2PP64 1363 aa22.81■■□□□ 1.24
ITGB5-205ENST00000474838 SLC24A1O60721 1099 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms