RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 EXOSC9Q06265 439 aaKnown RBP17.87■□□□□ 0.45
RPGR-206ENST00000474584 GGNBP2Q9H3C7 697 aa17.87■□□□□ 0.45
RPGR-206ENST00000474584 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
RPGR-206ENST00000474584 IL16Q14005 1332 aa17.87■□□□□ 0.45
RPGR-206ENST00000474584 PTPRMP28827 1452 aa17.87■□□□□ 0.45
RPGR-206ENST00000474584 KIF20BQ96Q89 1820 aa17.87■□□□□ 0.45
RPGR-206ENST00000474584 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
RPGR-206ENST00000474584 TRIM27P14373 513 aa17.86■□□□□ 0.45
RPGR-206ENST00000474584 IDI1Q13907 227 aa17.86■□□□□ 0.45
RPGR-206ENST00000474584 STK26Q9P289 416 aa17.86■□□□□ 0.45
RPGR-206ENST00000474584 HDAC1Q13547 482 aaPredicted RBP17.85■□□□□ 0.45
RPGR-206ENST00000474584 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
RPGR-206ENST00000474584 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
RPGR-206ENST00000474584 TMEM131LA2VDJ0 1609 aa17.85■□□□□ 0.45
RPGR-206ENST00000474584 RICTORQ6R327 1708 aa17.85■□□□□ 0.45
RPGR-206ENST00000474584 ATF7IPQ6VMQ6 1270 aa17.84■□□□□ 0.45
RPGR-206ENST00000474584 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
RPGR-206ENST00000474584 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
RPGR-206ENST00000474584 RAPGEF3O95398 923 aa17.84■□□□□ 0.45
RPGR-206ENST00000474584 SSH1Q8WYL5 1049 aa17.84■□□□□ 0.45
RPGR-206ENST00000474584 ANTXR1Q9H6X2 564 aa17.84■□□□□ 0.45
RPGR-206ENST00000474584 TBC1D2Q9BYX2 928 aa17.83■□□□□ 0.45
RPGR-206ENST00000474584 KIF16BQ96L93 1317 aa17.83■□□□□ 0.44
RPGR-206ENST00000474584 CD163L1Q9NR16 1453 aa17.82■□□□□ 0.44
RPGR-206ENST00000474584 FYB1O15117 783 aa17.82■□□□□ 0.44
RPGR-206ENST00000474584 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
RPGR-206ENST00000474584 YTHDC2Q9H6S0 1430 aaKnown RBP17.81■□□□□ 0.44
RPGR-206ENST00000474584 DIAPH1O60610 1272 aaKnown RBP17.81■□□□□ 0.44
RPGR-206ENST00000474584 RIPK4P57078 832 aa17.81■□□□□ 0.44
RPGR-206ENST00000474584 POGKQ9P215 609 aa17.81■□□□□ 0.44
RPGR-206ENST00000474584 IPO8O15397 1037 aaKnown RBP17.81■□□□□ 0.44
RPGR-206ENST00000474584 HDGFL2Q7Z4V5 671 aaPredicted RBP17.81■□□□□ 0.44
RPGR-206ENST00000474584 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
RPGR-206ENST00000474584 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
RPGR-206ENST00000474584 CDC42BPGQ6DT37 1551 aa17.8■□□□□ 0.44
RPGR-206ENST00000474584 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
RPGR-206ENST00000474584 PNPLA6Q8IY17 1366 aa17.79■□□□□ 0.44
RPGR-206ENST00000474584 SMC5Q8IY18 1101 aa17.78■□□□□ 0.44
RPGR-206ENST00000474584 LRRC7Q96NW7 1537 aa17.78■□□□□ 0.44
RPGR-206ENST00000474584 MFAP1P55081 439 aaKnown RBP17.77■□□□□ 0.44
RPGR-206ENST00000474584 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
RPGR-206ENST00000474584 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
RPGR-206ENST00000474584 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.43
RPGR-206ENST00000474584 ALKQ9UM73 1620 aa17.76■□□□□ 0.43
RPGR-206ENST00000474584 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
RPGR-206ENST00000474584 ARHGEF40Q8TER5 1519 aa17.75■□□□□ 0.43
RPGR-206ENST00000474584 FCHSD2O94868 740 aa17.75■□□□□ 0.43
RPGR-206ENST00000474584 YEATS2Q9ULM3 1422 aa17.74■□□□□ 0.43
RPGR-206ENST00000474584 L1TD1Q5T7N2 865 aaKnown RBP17.74■□□□□ 0.43
RPGR-206ENST00000474584 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
RPGR-206ENST00000474584 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
RPGR-206ENST00000474584 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
RPGR-206ENST00000474584 MAP2P11137 1827 aaKnown RBP17.73■□□□□ 0.43
RPGR-206ENST00000474584 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
RPGR-206ENST00000474584 ATP7BP35670 1465 aa17.72■□□□□ 0.43
RPGR-206ENST00000474584 CABP1Q9NZU7 370 aa17.72■□□□□ 0.43
RPGR-206ENST00000474584 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
RPGR-206ENST00000474584 NUCB1Q02818 461 aa17.71■□□□□ 0.43
RPGR-206ENST00000474584 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
RPGR-206ENST00000474584 ANO8Q9HCE9 1232 aaPredicted RBP17.71■□□□□ 0.43
RPGR-206ENST00000474584 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
RPGR-206ENST00000474584 SPRYD3Q8NCJ5 442 aa17.7■□□□□ 0.42
RPGR-206ENST00000474584 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
RPGR-206ENST00000474584 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
RPGR-206ENST00000474584 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
RPGR-206ENST00000474584 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
RPGR-206ENST00000474584 FAM43AQ8N2R8 423 aa17.69■□□□□ 0.42
RPGR-206ENST00000474584 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
RPGR-206ENST00000474584 MCM4P33991 863 aa17.69■□□□□ 0.42
RPGR-206ENST00000474584 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
RPGR-206ENST00000474584 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
RPGR-206ENST00000474584 LNPKQ9C0E8 428 aa17.68■□□□□ 0.42
RPGR-206ENST00000474584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.67■□□□□ 0.42
RPGR-206ENST00000474584 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
RPGR-206ENST00000474584 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
RPGR-206ENST00000474584 PTCH1Q13635 1447 aa17.66■□□□□ 0.42
RPGR-206ENST00000474584 RBM25P49756 843 aaKnown RBP17.66■□□□□ 0.42
RPGR-206ENST00000474584 BMP2KLQ5H9B9 411 aa17.65■□□□□ 0.42
RPGR-206ENST00000474584 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
RPGR-206ENST00000474584 GCC1Q96CN9 775 aa17.65■□□□□ 0.42
RPGR-206ENST00000474584 SETD1AO15047 1707 aaKnown RBP17.65■□□□□ 0.42
RPGR-206ENST00000474584 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
RPGR-206ENST00000474584 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.41
RPGR-206ENST00000474584 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
RPGR-206ENST00000474584 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
RPGR-206ENST00000474584 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
RPGR-206ENST00000474584 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.41
RPGR-206ENST00000474584 DLG5Q8TDM6 1919 aa17.64■□□□□ 0.41
RPGR-206ENST00000474584 CDK12Q9NYV4 1490 aaPredicted RBP17.64■□□□□ 0.41
RPGR-206ENST00000474584 GNAI1P63096 354 aa17.64■□□□□ 0.41
RPGR-206ENST00000474584 IFT57Q9NWB7 429 aa17.63■□□□□ 0.41
RPGR-206ENST00000474584 GOLGA6L3A6NEY3 463 aa17.63■□□□□ 0.41
RPGR-206ENST00000474584 HMOX1P09601 288 aa17.63■□□□□ 0.41
RPGR-206ENST00000474584 SNX21Q969T3 373 aa17.63■□□□□ 0.41
RPGR-206ENST00000474584 REREQ9P2R6 1566 aa17.62■□□□□ 0.41
RPGR-206ENST00000474584 EDC4Q6P2E9 1401 aaKnown RBP17.62■□□□□ 0.41
RPGR-206ENST00000474584 DDX11L8A8MPP1 907 aa17.62■□□□□ 0.41
RPGR-206ENST00000474584 ZBTB7BO15156 539 aaPredicted RBP17.62■□□□□ 0.41
RPGR-206ENST00000474584 VAMP4O75379 141 aa17.62■□□□□ 0.41
RPGR-206ENST00000474584 MRPL50Q8N5N7 158 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms