RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 ADH1BP00325 375 aa11.7□□□□□ -0.54
VPS50-211ENST00000474412 GGCXP38435 758 aa11.7□□□□□ -0.54
VPS50-211ENST00000474412 EPRSP07814 1512 aaKnown RBP11.69□□□□□ -0.54
VPS50-211ENST00000474412 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
VPS50-211ENST00000474412 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
VPS50-211ENST00000474412 FAM9AQ8IZU1 332 aaPredicted RBP11.68□□□□□ -0.54
VPS50-211ENST00000474412 SPSB2Q99619 263 aa11.68□□□□□ -0.54
VPS50-211ENST00000474412 FMNL1O95466 1100 aaPredicted RBP11.67□□□□□ -0.54
VPS50-211ENST00000474412 Q3C1V9 767 aa11.67□□□□□ -0.54
VPS50-211ENST00000474412 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
VPS50-211ENST00000474412 HLA-CQ95604 372 aa11.67□□□□□ -0.54
VPS50-211ENST00000474412 WDR7Q9Y4E6 1490 aa11.66□□□□□ -0.54
VPS50-211ENST00000474412 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.66□□□□□ -0.54
VPS50-211ENST00000474412 GUCA2AQ02747 115 aa11.65□□□□□ -0.54
VPS50-211ENST00000474412 SLC6A16Q9GZN6 736 aa11.65□□□□□ -0.54
VPS50-211ENST00000474412 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
VPS50-211ENST00000474412 FHOD3Q2V2M9 1422 aa11.65□□□□□ -0.54
VPS50-211ENST00000474412 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.55
VPS50-211ENST00000474412 S1PR4O95977 384 aa11.64□□□□□ -0.55
VPS50-211ENST00000474412 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
VPS50-211ENST00000474412 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
VPS50-211ENST00000474412 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
VPS50-211ENST00000474412 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
VPS50-211ENST00000474412 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
VPS50-211ENST00000474412 THAP11Q96EK4 314 aa11.63□□□□□ -0.55
VPS50-211ENST00000474412 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
VPS50-211ENST00000474412 ABCA9Q8IUA7 1624 aa11.62□□□□□ -0.55
VPS50-211ENST00000474412 RGS20O76081 388 aa11.62□□□□□ -0.55
VPS50-211ENST00000474412 FDX1P10109 184 aa11.62□□□□□ -0.55
VPS50-211ENST00000474412 NUP153P49790 1475 aaKnown RBP11.62□□□□□ -0.55
VPS50-211ENST00000474412 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
VPS50-211ENST00000474412 NDUFV2P19404 249 aa11.61□□□□□ -0.55
VPS50-211ENST00000474412 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
VPS50-211ENST00000474412 ATP10BO94823 1461 aa11.59□□□□□ -0.55
VPS50-211ENST00000474412 COL17A1Q9UMD9 1497 aaPredicted RBP11.59□□□□□ -0.55
VPS50-211ENST00000474412 ARID3CA6NKF2 412 aa11.59□□□□□ -0.55
VPS50-211ENST00000474412 RNF223E7ERA6 249 aa11.59□□□□□ -0.55
VPS50-211ENST00000474412 PPEF1O14829 653 aaPredicted RBP11.58□□□□□ -0.56
VPS50-211ENST00000474412 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.56
VPS50-211ENST00000474412 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
VPS50-211ENST00000474412 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.56
VPS50-211ENST00000474412 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
VPS50-211ENST00000474412 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
VPS50-211ENST00000474412 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
VPS50-211ENST00000474412 FAM160A2Q8N612 972 aaPredicted RBP11.57□□□□□ -0.56
VPS50-211ENST00000474412 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
VPS50-211ENST00000474412 PRDM9Q9NQV7 894 aa11.57□□□□□ -0.56
VPS50-211ENST00000474412 PCF11O94913 1555 aaKnown RBP11.57□□□□□ -0.56
VPS50-211ENST00000474412 HECW1Q76N89 1606 aa11.57□□□□□ -0.56
VPS50-211ENST00000474412 RSBN1LQ6PCB5 846 aaPredicted RBP11.56□□□□□ -0.56
VPS50-211ENST00000474412 ANKLE1Q8NAG6 615 aa11.56□□□□□ -0.56
VPS50-211ENST00000474412 SYMPKQ92797 1274 aaKnown RBP11.56□□□□□ -0.56
VPS50-211ENST00000474412 PCDHGC3Q9UN70 934 aa11.56□□□□□ -0.56
VPS50-211ENST00000474412 FRMPD1Q5SYB0 1578 aa11.55□□□□□ -0.56
VPS50-211ENST00000474412 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
VPS50-211ENST00000474412 DDRGK1Q96HY6 314 aa11.55□□□□□ -0.56
VPS50-211ENST00000474412 PRKD2Q9BZL6 878 aa11.55□□□□□ -0.56
VPS50-211ENST00000474412 TEX14Q8IWB6 1497 aa11.55□□□□□ -0.56
VPS50-211ENST00000474412 KIF14Q15058 1648 aa11.54□□□□□ -0.56
VPS50-211ENST00000474412 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
VPS50-211ENST00000474412 MYO5CQ9NQX4 1742 aa11.53□□□□□ -0.56
VPS50-211ENST00000474412 MYSM1Q5VVJ2 828 aa11.53□□□□□ -0.56
VPS50-211ENST00000474412 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
VPS50-211ENST00000474412 FAM117AQ9C073 453 aa11.53□□□□□ -0.56
VPS50-211ENST00000474412 RSPH6AQ9H0K4 717 aa11.53□□□□□ -0.56
VPS50-211ENST00000474412 MAGI3Q5TCQ9 1506 aa11.53□□□□□ -0.56
VPS50-211ENST00000474412 RICTORQ6R327 1708 aa11.52□□□□□ -0.56
VPS50-211ENST00000474412 SPTLC1O15269 473 aa11.52□□□□□ -0.57
VPS50-211ENST00000474412 GJA5P36382 358 aa11.52□□□□□ -0.57
VPS50-211ENST00000474412 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
VPS50-211ENST00000474412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS50-211ENST00000474412 MTMR2Q13614 643 aa11.51□□□□□ -0.57
VPS50-211ENST00000474412 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
VPS50-211ENST00000474412 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
VPS50-211ENST00000474412 CD109Q6YHK3 1445 aa11.5□□□□□ -0.57
VPS50-211ENST00000474412 SIGLEC1Q9BZZ2 1709 aa11.49□□□□□ -0.57
VPS50-211ENST00000474412 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
VPS50-211ENST00000474412 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
VPS50-211ENST00000474412 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
VPS50-211ENST00000474412 V9GY48 417 aaPredicted RBP11.49□□□□□ -0.57
VPS50-211ENST00000474412 CFAP74Q9C0B2 1584 aa11.49□□□□□ -0.57
VPS50-211ENST00000474412 SPDYE5A6NIY4 337 aa11.48□□□□□ -0.57
VPS50-211ENST00000474412 MMP16P51512 607 aa11.48□□□□□ -0.57
VPS50-211ENST00000474412 ZBTB3Q9H5J0 574 aa11.48□□□□□ -0.57
VPS50-211ENST00000474412 POLR3EQ9NVU0 708 aa11.48□□□□□ -0.57
VPS50-211ENST00000474412 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
VPS50-211ENST00000474412 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
VPS50-211ENST00000474412 JUNDP17535 347 aa11.47□□□□□ -0.57
VPS50-211ENST00000474412 SLC19A1P41440 591 aa11.47□□□□□ -0.57
VPS50-211ENST00000474412 CDC42BPAQ5VT25 1732 aa11.46□□□□□ -0.57
VPS50-211ENST00000474412 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.57
VPS50-211ENST00000474412 ADGRL1O94910 1474 aa11.46□□□□□ -0.57
VPS50-211ENST00000474412 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
VPS50-211ENST00000474412 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
VPS50-211ENST00000474412 PRR7Q8TB68 274 aa11.46□□□□□ -0.57
VPS50-211ENST00000474412 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
VPS50-211ENST00000474412 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
VPS50-211ENST00000474412 HRCP23327 699 aa11.45□□□□□ -0.58
VPS50-211ENST00000474412 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
VPS50-211ENST00000474412 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms