RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 PROCA1Q8NCQ7 364 aaPredicted RBP9.35□□□□□ -0.91
UFD1-207ENST00000474226 SNIP1Q8TAD8 396 aaKnown RBP9.34□□□□□ -0.91
UFD1-207ENST00000474226 BAP1Q92560 729 aa9.34□□□□□ -0.91
UFD1-207ENST00000474226 MAP10Q9P2G4 905 aa9.34□□□□□ -0.91
UFD1-207ENST00000474226 F12P00748 615 aaPredicted RBP9.33□□□□□ -0.92
UFD1-207ENST00000474226 SH3BP2P78314 561 aa9.33□□□□□ -0.92
UFD1-207ENST00000474226 LINC01559Q495D7 138 aa9.33□□□□□ -0.92
UFD1-207ENST00000474226 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
UFD1-207ENST00000474226 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
UFD1-207ENST00000474226 MYT1Q01538 1121 aa9.32□□□□□ -0.92
UFD1-207ENST00000474226 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
UFD1-207ENST00000474226 ZNF511Q8NB15 262 aa9.31□□□□□ -0.92
UFD1-207ENST00000474226 ABCC9O60706 1549 aa9.3□□□□□ -0.92
UFD1-207ENST00000474226 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
UFD1-207ENST00000474226 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
UFD1-207ENST00000474226 PPP2R2DQ66LE6 453 aa9.29□□□□□ -0.92
UFD1-207ENST00000474226 GOPCQ9HD26 462 aa9.29□□□□□ -0.92
UFD1-207ENST00000474226 J3QL48 77 aa9.28□□□□□ -0.92
UFD1-207ENST00000474226 SMPD1P17405 629 aa9.28□□□□□ -0.92
UFD1-207ENST00000474226 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
UFD1-207ENST00000474226 AVPP01185 164 aa9.27□□□□□ -0.93
UFD1-207ENST00000474226 ST8SIA5O15466 376 aa9.26□□□□□ -0.93
UFD1-207ENST00000474226 SIAH2O43255 324 aa9.26□□□□□ -0.93
UFD1-207ENST00000474226 ALDH1A1P00352 501 aa9.26□□□□□ -0.93
UFD1-207ENST00000474226 AP1G2O75843 785 aa9.25□□□□□ -0.93
UFD1-207ENST00000474226 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
UFD1-207ENST00000474226 VARSP26640 1264 aaKnown RBP9.25□□□□□ -0.93
UFD1-207ENST00000474226 ARMC2Q8NEN0 867 aa9.25□□□□□ -0.93
UFD1-207ENST00000474226 LRRN4Q8WUT4 740 aa9.25□□□□□ -0.93
UFD1-207ENST00000474226 AAASQ9NRG9 546 aa9.25□□□□□ -0.93
UFD1-207ENST00000474226 FOXJ1Q92949 421 aa9.24□□□□□ -0.93
UFD1-207ENST00000474226 AXIN1O15169 862 aa9.23□□□□□ -0.93
UFD1-207ENST00000474226 RFC5P40937 340 aa9.23□□□□□ -0.93
UFD1-207ENST00000474226 AGERQ15109 404 aa9.23□□□□□ -0.93
UFD1-207ENST00000474226 CTC1Q2NKJ3 1217 aa9.23□□□□□ -0.93
UFD1-207ENST00000474226 CRIPAKQ8N1N5 446 aa9.23□□□□□ -0.93
UFD1-207ENST00000474226 NBPF14Q5TI25 921 aa9.22□□□□□ -0.93
UFD1-207ENST00000474226 HPS1Q92902 700 aa9.22□□□□□ -0.93
UFD1-207ENST00000474226 TLL2Q9Y6L7 1015 aa9.22□□□□□ -0.93
UFD1-207ENST00000474226 WASF2Q9Y6W5 498 aa9.22□□□□□ -0.93
UFD1-207ENST00000474226 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
UFD1-207ENST00000474226 ZNF787Q6DD87 383 aa9.21□□□□□ -0.94
UFD1-207ENST00000474226 BPHLQ86WA6 291 aaPredicted RBP9.21□□□□□ -0.94
UFD1-207ENST00000474226 FAM174AQ8TBP5 190 aa9.21□□□□□ -0.94
UFD1-207ENST00000474226 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
UFD1-207ENST00000474226 NR6A1Q15406 480 aa9.19□□□□□ -0.94
UFD1-207ENST00000474226 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
UFD1-207ENST00000474226 MPNDQ8N594 471 aa9.18□□□□□ -0.94
UFD1-207ENST00000474226 GPKOWQ92917 476 aaPredicted RBP eCLIP9.18□□□□□ -0.943e-7■■□□□ 12.2
UFD1-207ENST00000474226 DACH1Q9UI36 760 aa9.18□□□□□ -0.94
UFD1-207ENST00000474226 FKBPLQ9UIM3 349 aa9.18□□□□□ -0.94
UFD1-207ENST00000474226 ARID5BQ14865 1188 aa9.17□□□□□ -0.94
UFD1-207ENST00000474226 TMEM259Q4ZIN3 620 aa9.17□□□□□ -0.94
UFD1-207ENST00000474226 SH3BP5LQ7L8J4 393 aa9.17□□□□□ -0.94
UFD1-207ENST00000474226 MAGEB6P1A0A0J9YX57 407 aa9.16□□□□□ -0.94
UFD1-207ENST00000474226 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
UFD1-207ENST00000474226 HMX1Q9NP08 348 aaPredicted RBP9.16□□□□□ -0.94
UFD1-207ENST00000474226 POTECB2RU33 542 aa9.15□□□□□ -0.94
UFD1-207ENST00000474226 CDK15Q96Q40 435 aa9.15□□□□□ -0.94
UFD1-207ENST00000474226 CARD14Q9BXL6 1004 aa9.15□□□□□ -0.94
UFD1-207ENST00000474226 ADH1CP00326 375 aa9.14□□□□□ -0.95
UFD1-207ENST00000474226 NNTQ13423 1086 aa9.14□□□□□ -0.95
UFD1-207ENST00000474226 PDXDC2PQ6P474 469 aa9.14□□□□□ -0.95
UFD1-207ENST00000474226 EPS8L1Q8TE68 723 aa9.14□□□□□ -0.95
UFD1-207ENST00000474226 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
UFD1-207ENST00000474226 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
UFD1-207ENST00000474226 C1QTNF2Q9BXJ5 285 aa9.13□□□□□ -0.95
UFD1-207ENST00000474226 ARHGAP9Q9BRR9 750 aa9.12□□□□□ -0.95
UFD1-207ENST00000474226 ATP13A2Q9NQ11 1180 aa9.12□□□□□ -0.95
UFD1-207ENST00000474226 GMPR2Q9P2T1 348 aaKnown RBP9.12□□□□□ -0.95
UFD1-207ENST00000474226 CAPN5O15484 640 aaPredicted RBP9.11□□□□□ -0.95
UFD1-207ENST00000474226 TRMT44Q8IYL2 757 aaKnown RBP9.11□□□□□ -0.95
UFD1-207ENST00000474226 PTK2Q05397 1052 aa9.1□□□□□ -0.95
UFD1-207ENST00000474226 NR5A1Q13285 461 aa9.1□□□□□ -0.95
UFD1-207ENST00000474226 ERFEQ4G0M1 354 aa9.1□□□□□ -0.95
UFD1-207ENST00000474226 VASH1Q7L8A9 365 aaPredicted RBP9.1□□□□□ -0.95
UFD1-207ENST00000474226 ZBTB33Q86T24 672 aa9.1□□□□□ -0.95
UFD1-207ENST00000474226 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
UFD1-207ENST00000474226 GRM5P41594 1212 aa9.09□□□□□ -0.95
UFD1-207ENST00000474226 TRIM34Q9BYJ4 488 aa9.09□□□□□ -0.95
UFD1-207ENST00000474226 MAP4K5Q9Y4K4 846 aa9.09□□□□□ -0.95
UFD1-207ENST00000474226 WDR4P57081 412 aaKnown RBP9.08□□□□□ -0.96
UFD1-207ENST00000474226 GPSM3Q9Y4H4 160 aa9.08□□□□□ -0.96
UFD1-207ENST00000474226 NR3C2P08235 984 aa9.07□□□□□ -0.96
UFD1-207ENST00000474226 TIMP2P16035 220 aa9.07□□□□□ -0.96
UFD1-207ENST00000474226 FSHRP23945 695 aa9.07□□□□□ -0.96
UFD1-207ENST00000474226 BANK1Q8NDB2 785 aa9.07□□□□□ -0.96
UFD1-207ENST00000474226 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
UFD1-207ENST00000474226 SENP2Q9HC62 589 aa9.07□□□□□ -0.96
UFD1-207ENST00000474226 BMP1P13497 986 aa9.06□□□□□ -0.96
UFD1-207ENST00000474226 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
UFD1-207ENST00000474226 OCSTAMPQ9BR26 566 aa9.06□□□□□ -0.96
UFD1-207ENST00000474226 ZIC2O95409 532 aaPredicted RBP9.05□□□□□ -0.96
UFD1-207ENST00000474226 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
UFD1-207ENST00000474226 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
UFD1-207ENST00000474226 CDV3Q9UKY7 258 aaKnown RBP9.05□□□□□ -0.96
UFD1-207ENST00000474226 TRIM46Q7Z4K8 759 aa9.04□□□□□ -0.96
UFD1-207ENST00000474226 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
UFD1-207ENST00000474226 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
UFD1-207ENST00000474226 TRIM47Q96LD4 638 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms