RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 VPS72Q15906 364 aa7.73□□□□□ -1.17
SNRNP40-204ENST00000474025 TMEM132EQ6IEE7 984 aa7.73□□□□□ -1.17
SNRNP40-204ENST00000474025 KRT28Q7Z3Y7 464 aa7.73□□□□□ -1.17
SNRNP40-204ENST00000474025 NRXN1Q9ULB1 1477 aa7.73□□□□□ -1.17
SNRNP40-204ENST00000474025 RGL3Q3MIN7 710 aa7.72□□□□□ -1.17
SNRNP40-204ENST00000474025 CABLES1Q8TDN4 633 aa7.72□□□□□ -1.17
SNRNP40-204ENST00000474025 SBNO1A3KN83 1393 aa7.71□□□□□ -1.17
SNRNP40-204ENST00000474025 HAP1P54257 671 aaPredicted RBP7.71□□□□□ -1.18
SNRNP40-204ENST00000474025 KRT27Q7Z3Y8 459 aa7.71□□□□□ -1.18
SNRNP40-204ENST00000474025 SIRT1Q96EB6 747 aa7.71□□□□□ -1.18
SNRNP40-204ENST00000474025 PHF8Q9UPP1 1060 aa7.71□□□□□ -1.18
SNRNP40-204ENST00000474025 ARHGEF10O15013 1369 aa7.71□□□□□ -1.18
SNRNP40-204ENST00000474025 NRAPQ86VF7 1730 aa7.7□□□□□ -1.18
SNRNP40-204ENST00000474025 RGPD8O14715 1765 aaPredicted RBP7.7□□□□□ -1.18
SNRNP40-204ENST00000474025 PSME1Q06323 249 aa7.7□□□□□ -1.18
SNRNP40-204ENST00000474025 CCDC9Q9Y3X0 531 aaKnown RBP7.7□□□□□ -1.18
SNRNP40-204ENST00000474025 PSDA5PKW4 1024 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-204ENST00000474025 FAM83GA6ND36 823 aa7.69□□□□□ -1.18
SNRNP40-204ENST00000474025 PLEKHG5O94827 1062 aa7.69□□□□□ -1.18
SNRNP40-204ENST00000474025 HRCP23327 699 aa7.69□□□□□ -1.18
SNRNP40-204ENST00000474025 C14orf93Q9H972 538 aaKnown RBP7.69□□□□□ -1.18
SNRNP40-204ENST00000474025 ANKARQ7Z5J8 1434 aa7.69□□□□□ -1.18
SNRNP40-204ENST00000474025 ADGRB2O60241 1585 aa7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 GOLGB1Q14789 3259 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 BAG6P46379 1132 aa7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 FAM98CQ17RN3 349 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 SP7Q8TDD2 431 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 PRAM1Q96QH2 718 aa7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 CLEC11AQ9Y240 323 aa7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 TRPM3Q9HCF6 1732 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 DISP2A7MBM2 1401 aa7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 DLC1Q96QB1 1528 aa7.68□□□□□ -1.18
SNRNP40-204ENST00000474025 ALS2Q96Q42 1657 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 A0A0G2JS52 829 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 MYT1Q01538 1121 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 SAFB2Q14151 953 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 CFAP70Q5T0N1 1121 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 PMFBP1Q8TBY8 1022 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 MPHOSPH9Q99550 1183 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 BTG4Q9NY30 223 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 DHX57Q6P158 1386 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 THSD7AQ9UPZ6 1657 aa7.67□□□□□ -1.18
SNRNP40-204ENST00000474025 COL14A1Q05707 1796 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-204ENST00000474025 EN1Q05925 392 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-204ENST00000474025 RGPD1P0DJD0 1748 aa7.66□□□□□ -1.18
SNRNP40-204ENST00000474025 TNS1Q9HBL0 1735 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-204ENST00000474025 ADGRB1O14514 1584 aa7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 R3HDM1Q15032 1099 aaKnown RBP7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 FAM182BQ5T319 152 aa7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 SPATA31A5Q5VU36 1347 aa7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 SPATA31A7Q8IWB4 1347 aa7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 PRR36Q9H6K5 1346 aa7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 ACIN1Q9UKV3 1341 aaKnown RBP7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 CRYBG1Q9Y4K1 1723 aa7.65□□□□□ -1.18
SNRNP40-204ENST00000474025 TULP4Q9NRJ4 1543 aa7.64□□□□□ -1.19
SNRNP40-204ENST00000474025 GPRASP1Q5JY77 1395 aa7.64□□□□□ -1.19
SNRNP40-204ENST00000474025 HAX1O00165 279 aa7.64□□□□□ -1.19
SNRNP40-204ENST00000474025 PRKAR2AP13861 404 aaKnown RBP7.64□□□□□ -1.19
SNRNP40-204ENST00000474025 YY1P25490 414 aa7.64□□□□□ -1.19
SNRNP40-204ENST00000474025 POGKQ9P215 609 aa7.64□□□□□ -1.19
SNRNP40-204ENST00000474025 EIF3AQ14152 1382 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-204ENST00000474025 HIRIP3Q9BW71 556 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-204ENST00000474025 CEP350Q5VT06 3117 aa7.62□□□□□ -1.19
SNRNP40-204ENST00000474025 SPATA31A1Q5TZJ5 1347 aa7.62□□□□□ -1.19
SNRNP40-204ENST00000474025 EZH2Q15910 746 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-204ENST00000474025 CAMKK2Q96RR4 588 aa7.62□□□□□ -1.19
SNRNP40-204ENST00000474025 PRDM11Q9NQV5 511 aa7.62□□□□□ -1.19
SNRNP40-204ENST00000474025 ATP7BP35670 1465 aa7.62□□□□□ -1.19
SNRNP40-204ENST00000474025 PARD3Q8TEW0 1356 aa7.61□□□□□ -1.19
SNRNP40-204ENST00000474025 KIAA0232Q92628 1395 aa7.61□□□□□ -1.19
SNRNP40-204ENST00000474025 MINK1Q8N4C8 1332 aaPredicted RBP7.61□□□□□ -1.19
SNRNP40-204ENST00000474025 WASLO00401 505 aaPredicted RBP7.61□□□□□ -1.19
SNRNP40-204ENST00000474025 TRIM37O94972 964 aa7.61□□□□□ -1.19
SNRNP40-204ENST00000474025 NGDNQ8NEJ9 315 aaKnown RBP7.61□□□□□ -1.19
SNRNP40-204ENST00000474025 TRAK1Q9UPV9 953 aa7.61□□□□□ -1.19
SNRNP40-204ENST00000474025 PHRF1Q9P1Y6 1649 aaKnown RBP7.6□□□□□ -1.19
SNRNP40-204ENST00000474025 PAK3O75914 559 aaPredicted RBP7.6□□□□□ -1.19
SNRNP40-204ENST00000474025 CHRNA2Q15822 529 aa7.6□□□□□ -1.19
SNRNP40-204ENST00000474025 FAM196AQ6ZSG2 479 aa7.6□□□□□ -1.19
SNRNP40-204ENST00000474025 RREB1Q92766 1687 aa7.6□□□□□ -1.19
SNRNP40-204ENST00000474025 ITSN1Q15811 1721 aa7.59□□□□□ -1.19
SNRNP40-204ENST00000474025 PRR29P0C7W0 189 aa7.59□□□□□ -1.19
SNRNP40-204ENST00000474025 IFFO2Q5TF58 517 aa7.59□□□□□ -1.19
SNRNP40-204ENST00000474025 SSH2Q76I76 1423 aa7.59□□□□□ -1.19
SNRNP40-204ENST00000474025 NUP188Q5SRE5 1749 aa7.58□□□□□ -1.2
SNRNP40-204ENST00000474025 APBA3O96018 575 aa7.58□□□□□ -1.2
SNRNP40-204ENST00000474025 BARGINQ6ZT62 677 aa7.58□□□□□ -1.2
SNRNP40-204ENST00000474025 STRN4Q9NRL3 753 aa7.58□□□□□ -1.2
SNRNP40-204ENST00000474025 NRKQ7Z2Y5 1582 aa7.58□□□□□ -1.2
SNRNP40-204ENST00000474025 ARHGEF28Q8N1W1 1705 aaKnown RBP7.58□□□□□ -1.2
SNRNP40-204ENST00000474025 POLR3AO14802 1390 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-204ENST00000474025 ZC3H6P61129 1189 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-204ENST00000474025 NUDT16Q96DE0 195 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-204ENST00000474025 USP35Q9P2H5 1018 aa7.57□□□□□ -1.2
SNRNP40-204ENST00000474025 CPDO75976 1380 aa7.57□□□□□ -1.2
SNRNP40-204ENST00000474025 TOPAZ1Q8N9V7 1692 aa7.57□□□□□ -1.2
SNRNP40-204ENST00000474025 LMO7Q8WWI1 1683 aa7.57□□□□□ -1.2
SNRNP40-204ENST00000474025 CAMTA1Q9Y6Y1 1673 aa7.57□□□□□ -1.2
SNRNP40-204ENST00000474025 PDE3BQ13370 1112 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms