RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 USP46P62068 366 aa4.87□□□□□ -1.63
CALD1-216ENST00000473714 TSHZ2Q9NRE2 1034 aa4.87□□□□□ -1.63
CALD1-216ENST00000473714 TIMP2P16035 220 aa4.86□□□□□ -1.63
CALD1-216ENST00000473714 C6orf118Q5T5N4 469 aa4.86□□□□□ -1.63
CALD1-216ENST00000473714 SVOPQ8N4V2 548 aa4.86□□□□□ -1.63
CALD1-216ENST00000473714 THOC2Q8NI27 1593 aaKnown RBP4.86□□□□□ -1.63
CALD1-216ENST00000473714 UPP2O95045 317 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 VARSP26640 1264 aaKnown RBP4.85□□□□□ -1.63
CALD1-216ENST00000473714 KRT76Q01546 638 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 CYB5RLQ6IPT4 315 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 ILDR2Q71H61 639 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 MPNDQ8N594 471 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 BCANQ96GW7 911 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 PHOX2BQ99453 314 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 TLL2Q9Y6L7 1015 aa4.85□□□□□ -1.63
CALD1-216ENST00000473714 BAZ1AQ9NRL2 1556 aaPredicted RBP4.85□□□□□ -1.63
CALD1-216ENST00000473714 SEMA3EO15041 775 aa4.84□□□□□ -1.63
CALD1-216ENST00000473714 ADAM23O75077 832 aa4.84□□□□□ -1.63
CALD1-216ENST00000473714 CD46P15529 392 aa4.84□□□□□ -1.63
CALD1-216ENST00000473714 ZNF385CQ66K41 422 aaPredicted RBP4.84□□□□□ -1.63
CALD1-216ENST00000473714 GPR161Q8N6U8 529 aaKnown RBP4.84□□□□□ -1.63
CALD1-216ENST00000473714 SCARF2Q96GP6 870 aaPredicted RBP4.84□□□□□ -1.63
CALD1-216ENST00000473714 COL25A1Q9BXS0 654 aaPredicted RBP4.84□□□□□ -1.63
CALD1-216ENST00000473714 ARHGEF11O15085 1522 aa4.83□□□□□ -1.64
CALD1-216ENST00000473714 BMP2P12643 396 aa4.83□□□□□ -1.64
CALD1-216ENST00000473714 LINC01559Q495D7 138 aa4.83□□□□□ -1.64
CALD1-216ENST00000473714 BAP1Q92560 729 aa4.83□□□□□ -1.64
CALD1-216ENST00000473714 SYMPKQ92797 1274 aaKnown RBP4.83□□□□□ -1.64
CALD1-216ENST00000473714 HLA-CQ95604 372 aa4.83□□□□□ -1.64
CALD1-216ENST00000473714 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
CALD1-216ENST00000473714 MYO15BQ96JP2 1530 aa4.82□□□□□ -1.64
CALD1-216ENST00000473714 MSTNO14793 375 aa4.82□□□□□ -1.64
CALD1-216ENST00000473714 ZIC2O95409 532 aaPredicted RBP4.82□□□□□ -1.64
CALD1-216ENST00000473714 CCNYL3P0C7X3 344 aa4.82□□□□□ -1.64
CALD1-216ENST00000473714 MS4A1P11836 297 aa4.82□□□□□ -1.64
CALD1-216ENST00000473714 RBM26Q5T8P6 1007 aaKnown RBP4.82□□□□□ -1.64
CALD1-216ENST00000473714 SMYD5Q6GMV2 418 aa4.82□□□□□ -1.64
CALD1-216ENST00000473714 RETREG3Q86VR2 466 aa4.82□□□□□ -1.64
CALD1-216ENST00000473714 KLF16Q9BXK1 252 aaPredicted RBP4.82□□□□□ -1.64
CALD1-216ENST00000473714 GPR37O15354 613 aa4.81□□□□□ -1.64
CALD1-216ENST00000473714 HOXA2O43364 376 aa4.81□□□□□ -1.64
CALD1-216ENST00000473714 ARHGEF15O94989 841 aa4.81□□□□□ -1.64
CALD1-216ENST00000473714 VSIG10Q8N0Z9 540 aa4.81□□□□□ -1.64
CALD1-216ENST00000473714 FAM174AQ8TBP5 190 aa4.81□□□□□ -1.64
CALD1-216ENST00000473714 UNC93B1Q9H1C4 597 aa4.81□□□□□ -1.64
CALD1-216ENST00000473714 ZFAND3Q9H8U3 227 aa4.81□□□□□ -1.64
CALD1-216ENST00000473714 GUCA2AQ02747 115 aa4.8□□□□□ -1.64
CALD1-216ENST00000473714 ARID5BQ14865 1188 aa4.8□□□□□ -1.64
CALD1-216ENST00000473714 ZNF511Q8NB15 262 aa4.8□□□□□ -1.64
CALD1-216ENST00000473714 WHAMMQ8TF30 809 aa4.8□□□□□ -1.64
CALD1-216ENST00000473714 PSMG3-AS1Q96PY0 264 aa4.8□□□□□ -1.64
CALD1-216ENST00000473714 EVA1BQ9NVM1 165 aa4.8□□□□□ -1.64
CALD1-216ENST00000473714 SOS2Q07890 1332 aaPredicted RBP4.79□□□□□ -1.64
CALD1-216ENST00000473714 SLURP2P0DP57 97 aa4.79□□□□□ -1.64
CALD1-216ENST00000473714 PTPRNQ16849 979 aa4.79□□□□□ -1.64
CALD1-216ENST00000473714 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.79□□□□□ -1.64
CALD1-216ENST00000473714 P3H3Q8IVL6 736 aa4.79□□□□□ -1.64
CALD1-216ENST00000473714 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
CALD1-216ENST00000473714 NANOS1Q8WY41 292 aaKnown RBP4.79□□□□□ -1.64
CALD1-216ENST00000473714 ITPKCQ96DU7 683 aa4.79□□□□□ -1.64
CALD1-216ENST00000473714 DNMT3LQ9UJW3 386 aa4.79□□□□□ -1.64
CALD1-216ENST00000473714 NESP48681 1621 aa4.79□□□□□ -1.64
CALD1-216ENST00000473714 C6orf229H3BNL8 230 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 SPTLC1O15269 473 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 PTSQ03393 145 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 KCNH2Q12809 1159 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 NR5A1Q13285 461 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 RNFT1Q5M7Z0 435 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 CDK15Q96Q40 435 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 ERCC6L2Q5T890 1561 aa4.78□□□□□ -1.64
CALD1-216ENST00000473714 MAP3K10Q02779 954 aa4.77□□□□□ -1.65
CALD1-216ENST00000473714 NUTM1Q86Y26 1132 aa4.77□□□□□ -1.65
CALD1-216ENST00000473714 GALNT6Q8NCL4 622 aa4.77□□□□□ -1.65
CALD1-216ENST00000473714 SPOCK3Q9BQ16 436 aa4.77□□□□□ -1.65
CALD1-216ENST00000473714 TTLL8A6PVC2 850 aa4.76□□□□□ -1.65
CALD1-216ENST00000473714 PLA2G4EQ3MJ16 856 aa4.76□□□□□ -1.65
CALD1-216ENST00000473714 SV2AQ7L0J3 742 aa4.76□□□□□ -1.65
CALD1-216ENST00000473714 VWA5B2Q8N398 1253 aa4.76□□□□□ -1.65
CALD1-216ENST00000473714 MEIOBQ8N635 442 aa4.76□□□□□ -1.65
CALD1-216ENST00000473714 TSEN34Q9BSV6 310 aaKnown RBP4.76□□□□□ -1.65
CALD1-216ENST00000473714 ENAMQ9NRM1 1142 aa4.76□□□□□ -1.65
CALD1-216ENST00000473714 TESPA1A2RU30 521 aaPredicted RBP4.75□□□□□ -1.65
CALD1-216ENST00000473714 FIGNL2A6NMB9 653 aa4.75□□□□□ -1.65
CALD1-216ENST00000473714 PHF20L1A8MW92 1017 aa4.75□□□□□ -1.65
CALD1-216ENST00000473714 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
CALD1-216ENST00000473714 K7ELQ4 463 aaPredicted RBP4.75□□□□□ -1.65
CALD1-216ENST00000473714 FDX1P10109 184 aa4.75□□□□□ -1.65
CALD1-216ENST00000473714 CCDC155Q8N6L0 562 aa4.75□□□□□ -1.65
CALD1-216ENST00000473714 DCAF5Q96JK2 942 aa4.75□□□□□ -1.65
CALD1-216ENST00000473714 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
CALD1-216ENST00000473714 SMARCA2P51531 1590 aa4.74□□□□□ -1.65
CALD1-216ENST00000473714 CDC14CA4D256 554 aa4.74□□□□□ -1.65
CALD1-216ENST00000473714 NR3C2P08235 984 aa4.74□□□□□ -1.65
CALD1-216ENST00000473714 PRKCSHP14314 528 aaPredicted RBP4.74□□□□□ -1.65
CALD1-216ENST00000473714 MDM2Q00987 491 aaPredicted RBP4.74□□□□□ -1.65
CALD1-216ENST00000473714 Q8N3U1 123 aa4.74□□□□□ -1.65
CALD1-216ENST00000473714 DISP3Q9P2K9 1392 aa4.74□□□□□ -1.65
CALD1-216ENST00000473714 ARAP1Q96P48 1450 aa4.74□□□□□ -1.65
CALD1-216ENST00000473714 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
CALD1-216ENST00000473714 ADAMTS2O95450 1211 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms