RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ADGRB2O60241 1585 aa14.58□□□□□ -0.08
SP140-208ENST00000473711 A0A1W2PP64 1363 aa14.58□□□□□ -0.08
SP140-208ENST00000473711 PARD3Q8TEW0 1356 aa14.58□□□□□ -0.08
SP140-208ENST00000473711 STRCQ7RTU9 1775 aa14.57□□□□□ -0.08
SP140-208ENST00000473711 MRS2Q9HD23 443 aa14.57□□□□□ -0.08
SP140-208ENST00000473711 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
SP140-208ENST00000473711 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
SP140-208ENST00000473711 NPC1L1Q9UHC9 1359 aa14.56□□□□□ -0.08
SP140-208ENST00000473711 CD163L1Q9NR16 1453 aa14.56□□□□□ -0.08
SP140-208ENST00000473711 NWD1Q149M9 1564 aa14.56□□□□□ -0.08
SP140-208ENST00000473711 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
SP140-208ENST00000473711 ATP7BP35670 1465 aa14.55□□□□□ -0.08
SP140-208ENST00000473711 MORC1Q86VD1 984 aa14.54□□□□□ -0.08
SP140-208ENST00000473711 PMFBP1Q8TBY8 1022 aa14.54□□□□□ -0.08
SP140-208ENST00000473711 ADGRL3Q9HAR2 1447 aa14.53□□□□□ -0.08
SP140-208ENST00000473711 ACEP12821 1306 aa14.53□□□□□ -0.08
SP140-208ENST00000473711 PPP2R1AP30153 589 aa14.53□□□□□ -0.08
SP140-208ENST00000473711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.53□□□□□ -0.08
SP140-208ENST00000473711 NKTRP30414 1462 aaKnown RBP14.52□□□□□ -0.08
SP140-208ENST00000473711 CPSF1Q10570 1443 aaKnown RBP14.52□□□□□ -0.08
SP140-208ENST00000473711 TMEM94Q12767 1356 aa14.52□□□□□ -0.08
SP140-208ENST00000473711 ZNF335Q9H4Z2 1342 aaPredicted RBP14.52□□□□□ -0.08
SP140-208ENST00000473711 NLRP13Q86W25 1043 aa14.52□□□□□ -0.09
SP140-208ENST00000473711 GGNBP2Q9H3C7 697 aa14.52□□□□□ -0.09
SP140-208ENST00000473711 C19orf44Q9H6X5 657 aa14.52□□□□□ -0.09
SP140-208ENST00000473711 FYB1O15117 783 aa14.51□□□□□ -0.09
SP140-208ENST00000473711 FAM9BQ8IZU0 186 aa14.51□□□□□ -0.09
SP140-208ENST00000473711 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
SP140-208ENST00000473711 ANKARQ7Z5J8 1434 aa14.5□□□□□ -0.09
SP140-208ENST00000473711 STRCP1A6NGW2 1772 aa14.5□□□□□ -0.09
SP140-208ENST00000473711 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
SP140-208ENST00000473711 NALCNQ8IZF0 1738 aa14.5□□□□□ -0.09
SP140-208ENST00000473711 TNNT2P45379 298 aaPredicted RBP14.5□□□□□ -0.09
SP140-208ENST00000473711 USP32Q8NFA0 1604 aa14.49□□□□□ -0.09
SP140-208ENST00000473711 CDC42BPGQ6DT37 1551 aa14.49□□□□□ -0.09
SP140-208ENST00000473711 ESCO1Q5FWF5 840 aa14.49□□□□□ -0.09
SP140-208ENST00000473711 NSD2O96028 1365 aa14.48□□□□□ -0.09
SP140-208ENST00000473711 ATF3P18847 181 aa14.48□□□□□ -0.09
SP140-208ENST00000473711 PHF8Q9UPP1 1060 aa14.48□□□□□ -0.09
SP140-208ENST00000473711 FMN2Q9NZ56 1722 aa14.48□□□□□ -0.09
SP140-208ENST00000473711 EDC4Q6P2E9 1401 aaKnown RBP14.48□□□□□ -0.09
SP140-208ENST00000473711 NME9Q86XW9 330 aa14.47□□□□□ -0.09
SP140-208ENST00000473711 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
SP140-208ENST00000473711 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
SP140-208ENST00000473711 NCOA3Q9Y6Q9 1424 aa14.47□□□□□ -0.09
SP140-208ENST00000473711 TTC21BQ7Z4L5 1316 aa14.46□□□□□ -0.09
SP140-208ENST00000473711 TOPAZ1Q8N9V7 1692 aa14.46□□□□□ -0.09
SP140-208ENST00000473711 ORAI2Q96SN7 254 aa14.46□□□□□ -0.09
SP140-208ENST00000473711 RGPD8O14715 1765 aaPredicted RBP14.46□□□□□ -0.09
SP140-208ENST00000473711 SPDYE4A6NLX3 237 aa14.45□□□□□ -0.1
SP140-208ENST00000473711 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
SP140-208ENST00000473711 POLR3AO14802 1390 aaPredicted RBP14.45□□□□□ -0.1
SP140-208ENST00000473711 USP6P35125 1406 aa14.44□□□□□ -0.1
SP140-208ENST00000473711 LRRC7Q96NW7 1537 aa14.44□□□□□ -0.1
SP140-208ENST00000473711 AKAP12Q02952 1782 aa14.43□□□□□ -0.1
SP140-208ENST00000473711 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
SP140-208ENST00000473711 CADPS2Q86UW7 1296 aa14.43□□□□□ -0.1
SP140-208ENST00000473711 COG3Q96JB2 828 aa14.43□□□□□ -0.1
SP140-208ENST00000473711 MSH6P52701 1360 aa14.43□□□□□ -0.1
SP140-208ENST00000473711 ITSN1Q15811 1721 aa14.43□□□□□ -0.1
SP140-208ENST00000473711 MTHFSP49914 203 aa14.42□□□□□ -0.1
SP140-208ENST00000473711 PSME1Q06323 249 aa14.42□□□□□ -0.1
SP140-208ENST00000473711 MON2Q7Z3U7 1717 aa14.41□□□□□ -0.1
SP140-208ENST00000473711 HAX1O00165 279 aa14.41□□□□□ -0.1
SP140-208ENST00000473711 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
SP140-208ENST00000473711 FBLN1P23142 703 aa14.41□□□□□ -0.1
SP140-208ENST00000473711 C1orf167Q5SNV9 1468 aa14.41□□□□□ -0.1
SP140-208ENST00000473711 SSH2Q76I76 1423 aa14.41□□□□□ -0.1
SP140-208ENST00000473711 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
SP140-208ENST00000473711 FOXO3O43524 673 aa14.4□□□□□ -0.1
SP140-208ENST00000473711 HNRNPUQ00839 825 aaKnown RBP eCLIP14.39□□□□□ -0.11
SP140-208ENST00000473711 DCCP43146 1447 aa14.39□□□□□ -0.11
SP140-208ENST00000473711 MST1RQ04912 1400 aa14.39□□□□□ -0.11
SP140-208ENST00000473711 KIF20BQ96Q89 1820 aa14.38□□□□□ -0.11
SP140-208ENST00000473711 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
SP140-208ENST00000473711 XPCQ01831 940 aaPredicted RBP14.38□□□□□ -0.11
SP140-208ENST00000473711 CFAP53Q96M91 514 aa14.38□□□□□ -0.11
SP140-208ENST00000473711 NLRP6P59044 892 aa14.37□□□□□ -0.11
SP140-208ENST00000473711 WDR43Q15061 677 aaKnown RBP eCLIP14.37□□□□□ -0.11
SP140-208ENST00000473711 NUTM2GQ5VZR2 741 aa14.37□□□□□ -0.11
SP140-208ENST00000473711 KRT28Q7Z3Y7 464 aa14.37□□□□□ -0.11
SP140-208ENST00000473711 ABTB2Q8N961 1025 aa14.37□□□□□ -0.11
SP140-208ENST00000473711 XIRP1Q702N8 1843 aaKnown RBP14.36□□□□□ -0.11
SP140-208ENST00000473711 SLAIN2Q9P270 581 aa14.36□□□□□ -0.11
SP140-208ENST00000473711 POLKQ9UBT6 870 aa14.36□□□□□ -0.11
SP140-208ENST00000473711 ADAMTS8Q9UP79 889 aa14.36□□□□□ -0.11
SP140-208ENST00000473711 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
SP140-208ENST00000473711 NRKQ7Z2Y5 1582 aa14.35□□□□□ -0.11
SP140-208ENST00000473711 PPM1GO15355 546 aaPredicted RBP14.35□□□□□ -0.11
SP140-208ENST00000473711 SOX12O15370 315 aa14.35□□□□□ -0.11
SP140-208ENST00000473711 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
SP140-208ENST00000473711 USP31Q70CQ4 1352 aa14.34□□□□□ -0.11
SP140-208ENST00000473711 SENP3-EIF4A1A0A087X0R7 540 aa14.34□□□□□ -0.11
SP140-208ENST00000473711 RRS1Q15050 365 aaKnown RBP14.34□□□□□ -0.11
SP140-208ENST00000473711 SP7Q8TDD2 431 aaPredicted RBP14.34□□□□□ -0.11
SP140-208ENST00000473711 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.11
SP140-208ENST00000473711 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.11
SP140-208ENST00000473711 EMILIN1Q9Y6C2 1016 aa14.33□□□□□ -0.12
SP140-208ENST00000473711 AATKQ6ZMQ8 1374 aa14.33□□□□□ -0.12
SP140-208ENST00000473711 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms