RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 ATP7BP35670 1465 aa12.68□□□□□ -0.38
SMG5-203ENST00000473643 C11orf95C9JLR9 678 aaPredicted RBP12.68□□□□□ -0.38
SMG5-203ENST00000473643 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
SMG5-203ENST00000473643 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
SMG5-203ENST00000473643 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
SMG5-203ENST00000473643 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
SMG5-203ENST00000473643 ACEP12821 1306 aa12.66□□□□□ -0.38
SMG5-203ENST00000473643 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
SMG5-203ENST00000473643 UNC5CLQ8IV45 518 aa12.66□□□□□ -0.38
SMG5-203ENST00000473643 ATRNO75882 1429 aa12.65□□□□□ -0.38
SMG5-203ENST00000473643 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
SMG5-203ENST00000473643 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
SMG5-203ENST00000473643 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
SMG5-203ENST00000473643 SLIT2O94813 1529 aa12.65□□□□□ -0.38
SMG5-203ENST00000473643 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
SMG5-203ENST00000473643 WASHC2AQ641Q2 1341 aa12.64□□□□□ -0.39
SMG5-203ENST00000473643 GJD4Q96KN9 370 aaPredicted RBP12.64□□□□□ -0.39
SMG5-203ENST00000473643 CCDC7Q96M83 1385 aa12.64□□□□□ -0.39
SMG5-203ENST00000473643 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
SMG5-203ENST00000473643 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■□□ 14.8
SMG5-203ENST00000473643 CABP1Q9NZU7 370 aa12.63□□□□□ -0.39
SMG5-203ENST00000473643 QRICH2Q9H0J4 1663 aa12.63□□□□□ -0.39
SMG5-203ENST00000473643 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
SMG5-203ENST00000473643 RGS12O14924 1447 aa12.62□□□□□ -0.39
SMG5-203ENST00000473643 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
SMG5-203ENST00000473643 VPS72Q15906 364 aa12.61□□□□□ -0.39
SMG5-203ENST00000473643 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
SMG5-203ENST00000473643 ATAD2Q6PL18 1390 aa12.6□□□□□ -0.39
SMG5-203ENST00000473643 ONECUT3O60422 494 aaPredicted RBP12.6□□□□□ -0.39
SMG5-203ENST00000473643 ALS2Q96Q42 1657 aa12.59□□□□□ -0.39
SMG5-203ENST00000473643 ABTB2Q8N961 1025 aa12.59□□□□□ -0.39
SMG5-203ENST00000473643 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
SMG5-203ENST00000473643 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
SMG5-203ENST00000473643 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
SMG5-203ENST00000473643 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
SMG5-203ENST00000473643 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
SMG5-203ENST00000473643 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
SMG5-203ENST00000473643 MARF1Q9Y4F3 1742 aaKnown RBP12.57□□□□□ -0.4
SMG5-203ENST00000473643 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
SMG5-203ENST00000473643 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
SMG5-203ENST00000473643 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
SMG5-203ENST00000473643 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
SMG5-203ENST00000473643 USP19O94966 1318 aa12.56□□□□□ -0.4
SMG5-203ENST00000473643 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
SMG5-203ENST00000473643 EP400Q96L91 3159 aa12.55□□□□□ -0.4
SMG5-203ENST00000473643 USP6P35125 1406 aa12.55□□□□□ -0.4
SMG5-203ENST00000473643 GCP02774 474 aa12.55□□□□□ -0.4
SMG5-203ENST00000473643 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
SMG5-203ENST00000473643 SEPT12Q8IYM1 358 aa12.54□□□□□ -0.4
SMG5-203ENST00000473643 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
SMG5-203ENST00000473643 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
SMG5-203ENST00000473643 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
SMG5-203ENST00000473643 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
SMG5-203ENST00000473643 NLRP6P59044 892 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 DDX10Q13206 875 aaKnown RBP12.53□□□□□ -0.4
SMG5-203ENST00000473643 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 ABCA3Q99758 1704 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 CPDO75976 1380 aa12.53□□□□□ -0.4
SMG5-203ENST00000473643 GLI3P10071 1580 aa12.52□□□□□ -0.4
SMG5-203ENST00000473643 PER1O15534 1290 aaPredicted RBP12.52□□□□□ -0.41
SMG5-203ENST00000473643 PANK3Q9H999 370 aa12.52□□□□□ -0.41
SMG5-203ENST00000473643 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.41
SMG5-203ENST00000473643 ANKRD36BQ8N2N9 1353 aa12.52□□□□□ -0.41
SMG5-203ENST00000473643 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
SMG5-203ENST00000473643 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
SMG5-203ENST00000473643 CD163L1Q9NR16 1453 aa12.51□□□□□ -0.41
SMG5-203ENST00000473643 CRYBG1Q9Y4K1 1723 aa12.51□□□□□ -0.41
SMG5-203ENST00000473643 COL14A1Q05707 1796 aaKnown RBP12.51□□□□□ -0.41
SMG5-203ENST00000473643 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
SMG5-203ENST00000473643 HDGFL2Q7Z4V5 671 aaPredicted RBP12.5□□□□□ -0.41
SMG5-203ENST00000473643 TTC21AQ8NDW8 1320 aa12.5□□□□□ -0.41
SMG5-203ENST00000473643 KTN1Q86UP2 1357 aaKnown RBP12.49□□□□□ -0.41
SMG5-203ENST00000473643 SPATA31A1Q5TZJ5 1347 aa12.49□□□□□ -0.41
SMG5-203ENST00000473643 EVA1CP58658 441 aa12.49□□□□□ -0.41
SMG5-203ENST00000473643 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
SMG5-203ENST00000473643 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
SMG5-203ENST00000473643 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
SMG5-203ENST00000473643 KRT27Q7Z3Y8 459 aa12.48□□□□□ -0.41
SMG5-203ENST00000473643 KCNH5Q8NCM2 988 aa12.48□□□□□ -0.41
SMG5-203ENST00000473643 AATKQ6ZMQ8 1374 aa12.47□□□□□ -0.41
SMG5-203ENST00000473643 LARP1Q6PKG0 1096 aaKnown RBP12.47□□□□□ -0.41
SMG5-203ENST00000473643 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
SMG5-203ENST00000473643 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
SMG5-203ENST00000473643 MYOM1P52179 1685 aa12.47□□□□□ -0.41
SMG5-203ENST00000473643 CAMTA1Q9Y6Y1 1673 aa12.47□□□□□ -0.41
SMG5-203ENST00000473643 NRAPQ86VF7 1730 aa12.46□□□□□ -0.41
SMG5-203ENST00000473643 BARGINQ6ZT62 677 aa12.46□□□□□ -0.41
SMG5-203ENST00000473643 SLIT3O75094 1523 aa12.46□□□□□ -0.42
SMG5-203ENST00000473643 SRCAPQ6ZRS2 3230 aa12.45□□□□□ -0.42
SMG5-203ENST00000473643 USP31Q70CQ4 1352 aa12.45□□□□□ -0.42
SMG5-203ENST00000473643 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
SMG5-203ENST00000473643 PHRF1Q9P1Y6 1649 aaKnown RBP12.45□□□□□ -0.42
SMG5-203ENST00000473643 NRKQ7Z2Y5 1582 aa12.45□□□□□ -0.42
SMG5-203ENST00000473643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMG5-203ENST00000473643 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
SMG5-203ENST00000473643 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms