RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 TRPM1Q7Z4N2 1603 aa18.64■□□□□ 0.57
SHROOM3-204ENST00000473602 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
SHROOM3-204ENST00000473602 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
SHROOM3-204ENST00000473602 HIRIP3Q9BW71 556 aaPredicted RBP18.63■□□□□ 0.57
SHROOM3-204ENST00000473602 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
SHROOM3-204ENST00000473602 R3HDM1Q15032 1099 aaKnown RBP18.62■□□□□ 0.57
SHROOM3-204ENST00000473602 LRP5O75197 1615 aa18.61■□□□□ 0.57
SHROOM3-204ENST00000473602 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
SHROOM3-204ENST00000473602 GPRASP1Q5JY77 1395 aa18.61■□□□□ 0.57
SHROOM3-204ENST00000473602 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
SHROOM3-204ENST00000473602 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
SHROOM3-204ENST00000473602 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
SHROOM3-204ENST00000473602 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
SHROOM3-204ENST00000473602 NBPF1Q3BBV0 1214 aa18.59■□□□□ 0.57
SHROOM3-204ENST00000473602 PRR36Q9H6K5 1346 aa18.58■□□□□ 0.57
SHROOM3-204ENST00000473602 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
SHROOM3-204ENST00000473602 EZH2Q15910 746 aaKnown RBP18.58■□□□□ 0.56
SHROOM3-204ENST00000473602 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.56
SHROOM3-204ENST00000473602 PRDM11Q9NQV5 511 aa18.58■□□□□ 0.56
SHROOM3-204ENST00000473602 WASLO00401 505 aaPredicted RBP18.57■□□□□ 0.56
SHROOM3-204ENST00000473602 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
SHROOM3-204ENST00000473602 ABCA3Q99758 1704 aa18.56■□□□□ 0.56
SHROOM3-204ENST00000473602 QRICH2Q9H0J4 1663 aa18.56■□□□□ 0.56
SHROOM3-204ENST00000473602 TRIM37O94972 964 aa18.54■□□□□ 0.56
SHROOM3-204ENST00000473602 CAMKK2Q96RR4 588 aa18.54■□□□□ 0.56
SHROOM3-204ENST00000473602 NRAPQ86VF7 1730 aa18.54■□□□□ 0.56
SHROOM3-204ENST00000473602 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
SHROOM3-204ENST00000473602 DISP2A7MBM2 1401 aa18.53■□□□□ 0.56
SHROOM3-204ENST00000473602 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
SHROOM3-204ENST00000473602 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
SHROOM3-204ENST00000473602 STRN4Q9NRL3 753 aa18.53■□□□□ 0.56
SHROOM3-204ENST00000473602 ATP7BP35670 1465 aa18.52■□□□□ 0.56
SHROOM3-204ENST00000473602 SPATA31A1Q5TZJ5 1347 aa18.52■□□□□ 0.56
SHROOM3-204ENST00000473602 CENPJQ9HC77 1338 aaPredicted RBP18.52■□□□□ 0.56
SHROOM3-204ENST00000473602 TOPAZ1Q8N9V7 1692 aa18.52■□□□□ 0.56
SHROOM3-204ENST00000473602 COL14A1Q05707 1796 aaKnown RBP18.52■□□□□ 0.55
SHROOM3-204ENST00000473602 APBA3O96018 575 aa18.51■□□□□ 0.55
SHROOM3-204ENST00000473602 KIAA0232Q92628 1395 aa18.51■□□□□ 0.55
SHROOM3-204ENST00000473602 TRPM3Q9HCF6 1732 aaPredicted RBP18.51■□□□□ 0.55
SHROOM3-204ENST00000473602 ZC3H6P61129 1189 aaKnown RBP18.5■□□□□ 0.55
SHROOM3-204ENST00000473602 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
SHROOM3-204ENST00000473602 ALS2Q96Q42 1657 aa18.49■□□□□ 0.55
SHROOM3-204ENST00000473602 EVA1CP58658 441 aa18.48■□□□□ 0.55
SHROOM3-204ENST00000473602 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
SHROOM3-204ENST00000473602 NUTM2GQ5VZR2 741 aa18.48■□□□□ 0.55
SHROOM3-204ENST00000473602 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
SHROOM3-204ENST00000473602 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
SHROOM3-204ENST00000473602 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
SHROOM3-204ENST00000473602 RGPD1P0DJD0 1748 aa18.47■□□□□ 0.55
SHROOM3-204ENST00000473602 PDE3BQ13370 1112 aa18.46■□□□□ 0.55
SHROOM3-204ENST00000473602 THSD7AQ9UPZ6 1657 aa18.46■□□□□ 0.55
SHROOM3-204ENST00000473602 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
SHROOM3-204ENST00000473602 BARGINQ6ZT62 677 aa18.44■□□□□ 0.54
SHROOM3-204ENST00000473602 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
SHROOM3-204ENST00000473602 PARD3Q8TEW0 1356 aa18.43■□□□□ 0.54
SHROOM3-204ENST00000473602 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
SHROOM3-204ENST00000473602 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
SHROOM3-204ENST00000473602 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
SHROOM3-204ENST00000473602 NBPF14Q5TI25 921 aa18.42■□□□□ 0.54
SHROOM3-204ENST00000473602 TNS1Q9HBL0 1735 aaKnown RBP18.41■□□□□ 0.54
SHROOM3-204ENST00000473602 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
SHROOM3-204ENST00000473602 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
SHROOM3-204ENST00000473602 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
SHROOM3-204ENST00000473602 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
SHROOM3-204ENST00000473602 YY1P25490 414 aa18.4■□□□□ 0.54
SHROOM3-204ENST00000473602 TCP11L2Q8N4U5 519 aa18.4■□□□□ 0.54
SHROOM3-204ENST00000473602 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
SHROOM3-204ENST00000473602 ACEP12821 1306 aa18.4■□□□□ 0.54
SHROOM3-204ENST00000473602 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
SHROOM3-204ENST00000473602 ABTB2Q8N961 1025 aa18.39■□□□□ 0.53
SHROOM3-204ENST00000473602 CRYBG1Q9Y4K1 1723 aa18.39■□□□□ 0.53
SHROOM3-204ENST00000473602 PPIP5K1Q6PFW1 1433 aa18.39■□□□□ 0.53
SHROOM3-204ENST00000473602 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
SHROOM3-204ENST00000473602 BRD4O60885 1362 aaPredicted RBP18.36■□□□□ 0.53
SHROOM3-204ENST00000473602 SPON1Q9HCB6 807 aa18.36■□□□□ 0.53
SHROOM3-204ENST00000473602 CAMTA1Q9Y6Y1 1673 aa18.35■□□□□ 0.53
SHROOM3-204ENST00000473602 PPP1R1BQ9UD71 204 aaPredicted RBP18.35■□□□□ 0.53
SHROOM3-204ENST00000473602 THRAP3Q9Y2W1 955 aaKnown RBP18.35■□□□□ 0.53
SHROOM3-204ENST00000473602 CPDO75976 1380 aa18.34■□□□□ 0.53
SHROOM3-204ENST00000473602 KCNQ2O43526 872 aa18.34■□□□□ 0.53
SHROOM3-204ENST00000473602 GCP02774 474 aa18.34■□□□□ 0.53
SHROOM3-204ENST00000473602 NLRP13Q86W25 1043 aa18.33■□□□□ 0.52
SHROOM3-204ENST00000473602 PHRF1Q9P1Y6 1649 aaKnown RBP18.33■□□□□ 0.52
SHROOM3-204ENST00000473602 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
SHROOM3-204ENST00000473602 USP19O94966 1318 aa18.32■□□□□ 0.52
SHROOM3-204ENST00000473602 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
SHROOM3-204ENST00000473602 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
SHROOM3-204ENST00000473602 CABP1Q9NZU7 370 aa18.3■□□□□ 0.52
SHROOM3-204ENST00000473602 USP6P35125 1406 aa18.3■□□□□ 0.52
SHROOM3-204ENST00000473602 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
SHROOM3-204ENST00000473602 C11orf95C9JLR9 678 aaPredicted RBP18.29■□□□□ 0.52
SHROOM3-204ENST00000473602 PLSCR1O15162 318 aa18.28■□□□□ 0.52
SHROOM3-204ENST00000473602 CCER1Q8TC90 406 aaPredicted RBP18.28■□□□□ 0.52
SHROOM3-204ENST00000473602 MON2Q7Z3U7 1717 aa18.27■□□□□ 0.52
SHROOM3-204ENST00000473602 NRKQ7Z2Y5 1582 aa18.27■□□□□ 0.52
SHROOM3-204ENST00000473602 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
SHROOM3-204ENST00000473602 RREB1Q92766 1687 aa18.27■□□□□ 0.52
SHROOM3-204ENST00000473602 NINLQ9Y2I6 1382 aa18.27■□□□□ 0.51
SHROOM3-204ENST00000473602 COL5A2P05997 1499 aaPredicted RBP18.26■□□□□ 0.51
SHROOM3-204ENST00000473602 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms