RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 CCDC9Q9Y3X0 531 aaKnown RBP13.85□□□□□ -0.19
BRD3-205ENST00000473349 BRWD3Q6RI45 1802 aa13.85□□□□□ -0.19
BRD3-205ENST00000473349 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
BRD3-205ENST00000473349 ARHGEF28Q8N1W1 1705 aaKnown RBP13.84□□□□□ -0.19
BRD3-205ENST00000473349 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
BRD3-205ENST00000473349 SEPT12Q8IYM1 358 aa13.84□□□□□ -0.19
BRD3-205ENST00000473349 ARHGEF10O15013 1369 aa13.83□□□□□ -0.19
BRD3-205ENST00000473349 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
BRD3-205ENST00000473349 ALS2Q96Q42 1657 aa13.82□□□□□ -0.2
BRD3-205ENST00000473349 DSG3P32926 999 aa13.82□□□□□ -0.2
BRD3-205ENST00000473349 VPS72Q15906 364 aa13.82□□□□□ -0.2
BRD3-205ENST00000473349 NBPF1Q3BBV0 1214 aa13.82□□□□□ -0.2
BRD3-205ENST00000473349 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
BRD3-205ENST00000473349 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
BRD3-205ENST00000473349 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
BRD3-205ENST00000473349 GPRASP1Q5JY77 1395 aa13.82□□□□□ -0.2
BRD3-205ENST00000473349 ATP7BP35670 1465 aa13.81□□□□□ -0.2
BRD3-205ENST00000473349 HRCP23327 699 aa13.81□□□□□ -0.2
BRD3-205ENST00000473349 DEFB132Q7Z7B7 95 aa13.81□□□□□ -0.2
BRD3-205ENST00000473349 NUDT16Q96DE0 195 aaKnown RBP13.81□□□□□ -0.2
BRD3-205ENST00000473349 BTG4Q9NY30 223 aa13.81□□□□□ -0.2
BRD3-205ENST00000473349 NRAPQ86VF7 1730 aa13.8□□□□□ -0.2
BRD3-205ENST00000473349 NWD2Q9ULI1 1742 aa13.79□□□□□ -0.2
BRD3-205ENST00000473349 A0A0G2JS52 829 aa13.79□□□□□ -0.2
BRD3-205ENST00000473349 MYT1Q01538 1121 aa13.79□□□□□ -0.2
BRD3-205ENST00000473349 FAM98CQ17RN3 349 aaKnown RBP13.79□□□□□ -0.2
BRD3-205ENST00000473349 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
BRD3-205ENST00000473349 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
BRD3-205ENST00000473349 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
BRD3-205ENST00000473349 CRYBG1Q9Y4K1 1723 aa13.78□□□□□ -0.2
BRD3-205ENST00000473349 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
BRD3-205ENST00000473349 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
BRD3-205ENST00000473349 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
BRD3-205ENST00000473349 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
BRD3-205ENST00000473349 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
BRD3-205ENST00000473349 ZC3H6P61129 1189 aaKnown RBP13.76□□□□□ -0.21
BRD3-205ENST00000473349 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
BRD3-205ENST00000473349 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
BRD3-205ENST00000473349 COL14A1Q05707 1796 aaKnown RBP13.76□□□□□ -0.21
BRD3-205ENST00000473349 KIAA0232Q92628 1395 aa13.75□□□□□ -0.21
BRD3-205ENST00000473349 ACEP12821 1306 aa13.75□□□□□ -0.21
BRD3-205ENST00000473349 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
BRD3-205ENST00000473349 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
BRD3-205ENST00000473349 TOPAZ1Q8N9V7 1692 aa13.75□□□□□ -0.21
BRD3-205ENST00000473349 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
BRD3-205ENST00000473349 SIN3AQ96ST3 1273 aa13.74□□□□□ -0.21
BRD3-205ENST00000473349 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
BRD3-205ENST00000473349 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
BRD3-205ENST00000473349 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
BRD3-205ENST00000473349 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
BRD3-205ENST00000473349 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
BRD3-205ENST00000473349 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
BRD3-205ENST00000473349 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
BRD3-205ENST00000473349 KIAA1210Q9ULL0 1709 aa13.72□□□□□ -0.21
BRD3-205ENST00000473349 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.21
BRD3-205ENST00000473349 SRPK2P78362 688 aaKnown RBP13.71□□□□□ -0.21
BRD3-205ENST00000473349 USP35Q9P2H5 1018 aa13.71□□□□□ -0.21
BRD3-205ENST00000473349 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
BRD3-205ENST00000473349 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
BRD3-205ENST00000473349 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
BRD3-205ENST00000473349 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
BRD3-205ENST00000473349 NEUROD1Q13562 356 aa13.7□□□□□ -0.22
BRD3-205ENST00000473349 PPIP5K1Q6PFW1 1433 aa13.7□□□□□ -0.22
BRD3-205ENST00000473349 PSDA5PKW4 1024 aaPredicted RBP13.69□□□□□ -0.22
BRD3-205ENST00000473349 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
BRD3-205ENST00000473349 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
BRD3-205ENST00000473349 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
BRD3-205ENST00000473349 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
BRD3-205ENST00000473349 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
BRD3-205ENST00000473349 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
BRD3-205ENST00000473349 ZBTB7CA1YPR0 619 aa13.67□□□□□ -0.22
BRD3-205ENST00000473349 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
BRD3-205ENST00000473349 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
BRD3-205ENST00000473349 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
BRD3-205ENST00000473349 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
BRD3-205ENST00000473349 USP19O94966 1318 aa13.64□□□□□ -0.23
BRD3-205ENST00000473349 TRIM37O94972 964 aa13.64□□□□□ -0.23
BRD3-205ENST00000473349 BAG6P46379 1132 aa13.64□□□□□ -0.23
BRD3-205ENST00000473349 EVA1CP58658 441 aa13.64□□□□□ -0.23
BRD3-205ENST00000473349 TRPM1Q7Z4N2 1603 aa13.64□□□□□ -0.23
BRD3-205ENST00000473349 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
BRD3-205ENST00000473349 GCP02774 474 aa13.63□□□□□ -0.23
BRD3-205ENST00000473349 TNS1Q9HBL0 1735 aaKnown RBP13.62□□□□□ -0.23
BRD3-205ENST00000473349 ZBTB22O15209 634 aa13.62□□□□□ -0.23
BRD3-205ENST00000473349 ABCB7O75027 752 aa13.62□□□□□ -0.23
BRD3-205ENST00000473349 EZH2Q15910 746 aaKnown RBP13.62□□□□□ -0.23
BRD3-205ENST00000473349 USP6P35125 1406 aa13.62□□□□□ -0.23
BRD3-205ENST00000473349 RGPD1P0DJD0 1748 aa13.61□□□□□ -0.23
BRD3-205ENST00000473349 NLRP6P59044 892 aa13.61□□□□□ -0.23
BRD3-205ENST00000473349 NLRP13Q86W25 1043 aa13.61□□□□□ -0.23
BRD3-205ENST00000473349 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
BRD3-205ENST00000473349 CPDO75976 1380 aa13.6□□□□□ -0.23
BRD3-205ENST00000473349 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
BRD3-205ENST00000473349 SOX12O15370 315 aa13.6□□□□□ -0.23
BRD3-205ENST00000473349 R3HDM1Q15032 1099 aaKnown RBP13.6□□□□□ -0.23
BRD3-205ENST00000473349 COL5A2P05997 1499 aaPredicted RBP13.6□□□□□ -0.23
BRD3-205ENST00000473349 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
BRD3-205ENST00000473349 EVC2Q86UK5 1308 aa13.59□□□□□ -0.23
BRD3-205ENST00000473349 BARGINQ6ZT62 677 aa13.58□□□□□ -0.24
BRD3-205ENST00000473349 APBA3O96018 575 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms