RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 PRKRIP1Q9H875 184 aaPredicted RBP25.83■■□□□ 1.73
TNFRSF25-211ENST00000473343 CNGB1Q14028 1251 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF25-211ENST00000473343 NPHP3Q7Z494 1330 aa25.82■■□□□ 1.72
TNFRSF25-211ENST00000473343 TTC21AQ8NDW8 1320 aa25.82■■□□□ 1.72
TNFRSF25-211ENST00000473343 KRT28Q7Z3Y7 464 aa25.8■■□□□ 1.72
TNFRSF25-211ENST00000473343 DDX17Q92841 729 aaKnown RBP25.8■■□□□ 1.72
TNFRSF25-211ENST00000473343 PARD3Q8TEW0 1356 aa25.79■■□□□ 1.72
TNFRSF25-211ENST00000473343 XPCQ01831 940 aaPredicted RBP25.79■■□□□ 1.72
TNFRSF25-211ENST00000473343 NME9Q86XW9 330 aa25.79■■□□□ 1.72
TNFRSF25-211ENST00000473343 UBAP1LF5GYI3 381 aa25.78■■□□□ 1.72
TNFRSF25-211ENST00000473343 RALBP1Q15311 655 aa25.78■■□□□ 1.72
TNFRSF25-211ENST00000473343 MIER1Q8N108 512 aa25.78■■□□□ 1.72
TNFRSF25-211ENST00000473343 GGNBP2Q9H3C7 697 aa25.78■■□□□ 1.72
TNFRSF25-211ENST00000473343 PAK3O75914 559 aaPredicted RBP25.77■■□□□ 1.72
TNFRSF25-211ENST00000473343 PXDNQ92626 1479 aa25.77■■□□□ 1.72
TNFRSF25-211ENST00000473343 ROBO1Q9Y6N7 1651 aa25.75■■□□□ 1.71
TNFRSF25-211ENST00000473343 KIF20BQ96Q89 1820 aa25.74■■□□□ 1.71
TNFRSF25-211ENST00000473343 SBNO1A3KN83 1393 aa25.74■■□□□ 1.71
TNFRSF25-211ENST00000473343 SOS2Q07890 1332 aaPredicted RBP25.74■■□□□ 1.71
TNFRSF25-211ENST00000473343 MORC1Q86VD1 984 aa25.73■■□□□ 1.71
TNFRSF25-211ENST00000473343 TRPM3Q9HCF6 1732 aaPredicted RBP25.73■■□□□ 1.71
TNFRSF25-211ENST00000473343 ZRANB1Q9UGI0 708 aa25.73■■□□□ 1.71
TNFRSF25-211ENST00000473343 USP31Q70CQ4 1352 aa25.72■■□□□ 1.71
TNFRSF25-211ENST00000473343 PIP4K2BP78356 416 aa25.72■■□□□ 1.71
TNFRSF25-211ENST00000473343 ABTB2Q8N961 1025 aa25.72■■□□□ 1.71
TNFRSF25-211ENST00000473343 NHSL1Q5SYE7 1610 aa25.71■■□□□ 1.71
TNFRSF25-211ENST00000473343 COG3Q96JB2 828 aa25.71■■□□□ 1.71
TNFRSF25-211ENST00000473343 PIK3C2AO00443 1686 aa25.71■■□□□ 1.71
TNFRSF25-211ENST00000473343 OVOS2A0A0J9YW53 1432 aa25.71■■□□□ 1.71
TNFRSF25-211ENST00000473343 OVOS2Q6IE36 1432 aa25.71■■□□□ 1.71
TNFRSF25-211ENST00000473343 ANKRD26Q9UPS8 1709 aa25.69■■□□□ 1.7
TNFRSF25-211ENST00000473343 NLRP6P59044 892 aa25.69■■□□□ 1.7
TNFRSF25-211ENST00000473343 MYBBP1AQ9BQG0 1328 aaKnown RBP25.68■■□□□ 1.7
TNFRSF25-211ENST00000473343 AHDC1Q5TGY3 1603 aaPredicted RBP25.68■■□□□ 1.7
TNFRSF25-211ENST00000473343 TNS3Q68CZ2 1445 aa25.68■■□□□ 1.7
TNFRSF25-211ENST00000473343 SPATA31A3Q5VYP0 1347 aa25.68■■□□□ 1.7
TNFRSF25-211ENST00000473343 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
TNFRSF25-211ENST00000473343 NUTM2GQ5VZR2 741 aa25.65■■□□□ 1.7
TNFRSF25-211ENST00000473343 ALS2Q96Q42 1657 aa25.65■■□□□ 1.7
TNFRSF25-211ENST00000473343 PPP2R1AP30153 589 aa25.65■■□□□ 1.7
TNFRSF25-211ENST00000473343 TNNT2P45379 298 aaPredicted RBP25.65■■□□□ 1.7
TNFRSF25-211ENST00000473343 LMOD2Q6P5Q4 547 aa25.65■■□□□ 1.7
TNFRSF25-211ENST00000473343 NLRP13Q86W25 1043 aa25.65■■□□□ 1.7
TNFRSF25-211ENST00000473343 USP54Q70EL1 1684 aa25.64■■□□□ 1.7
TNFRSF25-211ENST00000473343 ARHGEF10O15013 1369 aa25.63■■□□□ 1.69
TNFRSF25-211ENST00000473343 CCER2I3L3R5 266 aa25.62■■□□□ 1.69
TNFRSF25-211ENST00000473343 AATKQ6ZMQ8 1374 aa25.6■■□□□ 1.69
TNFRSF25-211ENST00000473343 USP19O94966 1318 aa25.6■■□□□ 1.69
TNFRSF25-211ENST00000473343 MARF1Q9Y4F3 1742 aaKnown RBP25.6■■□□□ 1.69
TNFRSF25-211ENST00000473343 LRRC59Q96AG4 307 aaKnown RBP25.59■■□□□ 1.69
TNFRSF25-211ENST00000473343 FBLN1P23142 703 aa25.57■■□□□ 1.68
TNFRSF25-211ENST00000473343 SLIT3O75094 1523 aa25.56■■□□□ 1.68
TNFRSF25-211ENST00000473343 PHLPP1O60346 1717 aa25.56■■□□□ 1.68
TNFRSF25-211ENST00000473343 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
TNFRSF25-211ENST00000473343 KCNH5Q8NCM2 988 aa25.55■■□□□ 1.68
TNFRSF25-211ENST00000473343 MED1Q15648 1581 aaPredicted RBP25.54■■□□□ 1.68
TNFRSF25-211ENST00000473343 SOX12O15370 315 aa25.54■■□□□ 1.68
TNFRSF25-211ENST00000473343 MTHFSP49914 203 aa25.54■■□□□ 1.68
TNFRSF25-211ENST00000473343 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
TNFRSF25-211ENST00000473343 POLKQ9UBT6 870 aa25.54■■□□□ 1.68
TNFRSF25-211ENST00000473343 GCP02774 474 aa25.53■■□□□ 1.68
TNFRSF25-211ENST00000473343 RRS1Q15050 365 aaKnown RBP25.52■■□□□ 1.68
TNFRSF25-211ENST00000473343 SMG6Q86US8 1419 aaKnown RBP25.52■■□□□ 1.68
TNFRSF25-211ENST00000473343 MRS2Q9HD23 443 aa25.52■■□□□ 1.68
TNFRSF25-211ENST00000473343 NFAT5O94916 1531 aa25.52■■□□□ 1.68
TNFRSF25-211ENST00000473343 PLEKHG5O94827 1062 aa25.51■■□□□ 1.67
TNFRSF25-211ENST00000473343 EMILIN1Q9Y6C2 1016 aa25.51■■□□□ 1.67
TNFRSF25-211ENST00000473343 PNPLA6Q8IY17 1366 aa25.5■■□□□ 1.67
TNFRSF25-211ENST00000473343 CABLES1Q8TDN4 633 aa25.49■■□□□ 1.67
TNFRSF25-211ENST00000473343 MAP3K19Q56UN5 1328 aa25.49■■□□□ 1.67
TNFRSF25-211ENST00000473343 CRYBG1Q9Y4K1 1723 aa25.47■■□□□ 1.67
TNFRSF25-211ENST00000473343 PHRF1Q9P1Y6 1649 aaKnown RBP25.46■■□□□ 1.67
TNFRSF25-211ENST00000473343 PPM1GO15355 546 aaPredicted RBP25.46■■□□□ 1.67
TNFRSF25-211ENST00000473343 CFAP53Q96M91 514 aa25.45■■□□□ 1.66
TNFRSF25-211ENST00000473343 MAP2P11137 1827 aaKnown RBP25.45■■□□□ 1.66
TNFRSF25-211ENST00000473343 INSRP06213 1382 aa25.45■■□□□ 1.66
TNFRSF25-211ENST00000473343 COL22A1Q8NFW1 1626 aaPredicted RBP25.44■■□□□ 1.66
TNFRSF25-211ENST00000473343 ARHGEF25Q86VW2 580 aa25.44■■□□□ 1.66
TNFRSF25-211ENST00000473343 CDK12Q9NYV4 1490 aaPredicted RBP25.44■■□□□ 1.66
TNFRSF25-211ENST00000473343 KIF24Q5T7B8 1368 aa25.44■■□□□ 1.66
TNFRSF25-211ENST00000473343 HSPA1LP34931 641 aa25.43■■□□□ 1.66
TNFRSF25-211ENST00000473343 AMPHP49418 695 aa25.42■■□□□ 1.66
TNFRSF25-211ENST00000473343 FLT4P35916 1363 aa25.42■■□□□ 1.66
TNFRSF25-211ENST00000473343 ZC3H6P61129 1189 aaKnown RBP25.41■■□□□ 1.66
TNFRSF25-211ENST00000473343 RTL1A6NKG5 1358 aa25.41■■□□□ 1.66
TNFRSF25-211ENST00000473343 CPDO75976 1380 aa25.41■■□□□ 1.66
TNFRSF25-211ENST00000473343 PEAK1Q9H792 1746 aa25.41■■□□□ 1.66
TNFRSF25-211ENST00000473343 HAP1P54257 671 aaPredicted RBP25.4■■□□□ 1.66
TNFRSF25-211ENST00000473343 PNISRQ8TF01 805 aaKnown RBP25.4■■□□□ 1.66
TNFRSF25-211ENST00000473343 JCADQ9P266 1359 aa25.4■■□□□ 1.66
TNFRSF25-211ENST00000473343 COL3A1P02461 1466 aaPredicted RBP25.4■■□□□ 1.66
TNFRSF25-211ENST00000473343 ABCA3Q99758 1704 aa25.4■■□□□ 1.66
TNFRSF25-211ENST00000473343 HOXC9P31274 260 aa25.39■■□□□ 1.65
TNFRSF25-211ENST00000473343 KIAA0232Q92628 1395 aa25.38■■□□□ 1.65
TNFRSF25-211ENST00000473343 HSP90AB2PQ58FF8 381 aa25.38■■□□□ 1.65
TNFRSF25-211ENST00000473343 IP6K1Q92551 441 aa25.38■■□□□ 1.65
TNFRSF25-211ENST00000473343 LTN1O94822 1766 aa25.37■■□□□ 1.65
TNFRSF25-211ENST00000473343 SHPRHQ149N8 1683 aa25.36■■□□□ 1.65
TNFRSF25-211ENST00000473343 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
TNFRSF25-211ENST00000473343 DIAPH1O60610 1272 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms