RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 PLEKHG5O94827 1062 aa23.2■■□□□ 1.3
PTK7-211ENST00000473339 SRPK2P78362 688 aaKnown RBP23.19■■□□□ 1.3
PTK7-211ENST00000473339 GJD4Q96KN9 370 aaPredicted RBP23.19■■□□□ 1.3
PTK7-211ENST00000473339 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.19■■□□□ 1.3
PTK7-211ENST00000473339 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
PTK7-211ENST00000473339 PPIP5K1Q6PFW1 1433 aa23.18■■□□□ 1.3
PTK7-211ENST00000473339 TONSLQ96HA7 1378 aa23.18■■□□□ 1.3
PTK7-211ENST00000473339 PAK3O75914 559 aaPredicted RBP23.17■■□□□ 1.3
PTK7-211ENST00000473339 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
PTK7-211ENST00000473339 GLI3P10071 1580 aa23.16■■□□□ 1.3
PTK7-211ENST00000473339 EP400Q96L91 3159 aa23.15■■□□□ 1.3
PTK7-211ENST00000473339 SSH2Q76I76 1423 aa23.15■■□□□ 1.3
PTK7-211ENST00000473339 HAP1P54257 671 aaPredicted RBP23.14■■□□□ 1.29
PTK7-211ENST00000473339 VPS72Q15906 364 aa23.14■■□□□ 1.29
PTK7-211ENST00000473339 CARD11Q9BXL7 1154 aa23.14■■□□□ 1.29
PTK7-211ENST00000473339 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.29
PTK7-211ENST00000473339 EVC2Q86UK5 1308 aa23.13■■□□□ 1.29
PTK7-211ENST00000473339 PLCH1Q4KWH8 1693 aa23.13■■□□□ 1.29
PTK7-211ENST00000473339 NUTM2GQ5VZR2 741 aa23.12■■□□□ 1.29
PTK7-211ENST00000473339 NWD2Q9ULI1 1742 aa23.11■■□□□ 1.29
PTK7-211ENST00000473339 ONECUT3O60422 494 aaPredicted RBP23.11■■□□□ 1.29
PTK7-211ENST00000473339 USP19O94966 1318 aa23.1■■□□□ 1.29
PTK7-211ENST00000473339 USP6P35125 1406 aa23.09■■□□□ 1.29
PTK7-211ENST00000473339 NRAPQ86VF7 1730 aa23.09■■□□□ 1.29
PTK7-211ENST00000473339 BTG4Q9NY30 223 aa23.09■■□□□ 1.29
PTK7-211ENST00000473339 BRD4O60885 1362 aaPredicted RBP23.08■■□□□ 1.29
PTK7-211ENST00000473339 KIAA0232Q92628 1395 aa23.08■■□□□ 1.29
PTK7-211ENST00000473339 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
PTK7-211ENST00000473339 PHRF1Q9P1Y6 1649 aaKnown RBP23.07■■□□□ 1.28
PTK7-211ENST00000473339 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
PTK7-211ENST00000473339 COL14A1Q05707 1796 aaKnown RBP23.06■■□□□ 1.28
PTK7-211ENST00000473339 TESK2Q96S53 571 aa23.06■■□□□ 1.28
PTK7-211ENST00000473339 NRKQ7Z2Y5 1582 aa23.04■■□□□ 1.28
PTK7-211ENST00000473339 ZC3H6P61129 1189 aaKnown RBP23.03■■□□□ 1.28
PTK7-211ENST00000473339 CHRNA2Q15822 529 aa23.03■■□□□ 1.28
PTK7-211ENST00000473339 PRDM11Q9NQV5 511 aa23.03■■□□□ 1.28
PTK7-211ENST00000473339 CPDO75976 1380 aa23.02■■□□□ 1.28
PTK7-211ENST00000473339 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
PTK7-211ENST00000473339 GCP02774 474 aa23.02■■□□□ 1.28
PTK7-211ENST00000473339 SEPT12Q8IYM1 358 aa23.02■■□□□ 1.28
PTK7-211ENST00000473339 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
PTK7-211ENST00000473339 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
PTK7-211ENST00000473339 SPATA31A5Q5VU36 1347 aa23.01■■□□□ 1.27
PTK7-211ENST00000473339 SPATA31A7Q8IWB4 1347 aa23.01■■□□□ 1.27
PTK7-211ENST00000473339 NLRP13Q86W25 1043 aa23■■□□□ 1.27
PTK7-211ENST00000473339 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
PTK7-211ENST00000473339 TTC21BQ7Z4L5 1316 aa23■■□□□ 1.27
PTK7-211ENST00000473339 ST20-MTHFSA0A0A6YYL1 179 aa22.99■■□□□ 1.27
PTK7-211ENST00000473339 CLSPNQ9HAW4 1339 aa22.99■■□□□ 1.27
PTK7-211ENST00000473339 SLIT3O75094 1523 aa22.98■■□□□ 1.27
PTK7-211ENST00000473339 PIK3C2AO00443 1686 aa22.98■■□□□ 1.27
PTK7-211ENST00000473339 CAMTA1Q9Y6Y1 1673 aa22.98■■□□□ 1.27
PTK7-211ENST00000473339 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
PTK7-211ENST00000473339 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
PTK7-211ENST00000473339 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
PTK7-211ENST00000473339 NLRP6P59044 892 aa22.96■■□□□ 1.27
PTK7-211ENST00000473339 CCDC9Q9Y3X0 531 aaKnown RBP22.96■■□□□ 1.27
PTK7-211ENST00000473339 BRWD3Q6RI45 1802 aa22.96■■□□□ 1.27
PTK7-211ENST00000473339 FAM98CQ17RN3 349 aaKnown RBP22.95■■□□□ 1.26
PTK7-211ENST00000473339 SPATA31A1Q5TZJ5 1347 aa22.95■■□□□ 1.26
PTK7-211ENST00000473339 SLC12A5Q9H2X9 1139 aa22.95■■□□□ 1.26
PTK7-211ENST00000473339 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.26
PTK7-211ENST00000473339 KTN1Q86UP2 1357 aaKnown RBP22.92■■□□□ 1.26
PTK7-211ENST00000473339 TTC21AQ8NDW8 1320 aa22.92■■□□□ 1.26
PTK7-211ENST00000473339 THSD7AQ9UPZ6 1657 aa22.91■■□□□ 1.26
PTK7-211ENST00000473339 ZRANB1Q9UGI0 708 aa22.91■■□□□ 1.26
PTK7-211ENST00000473339 LARP1Q6PKG0 1096 aaKnown RBP22.9■■□□□ 1.26
PTK7-211ENST00000473339 KRT27Q7Z3Y8 459 aa22.9■■□□□ 1.26
PTK7-211ENST00000473339 MON2Q7Z3U7 1717 aa22.9■■□□□ 1.26
PTK7-211ENST00000473339 AATKQ6ZMQ8 1374 aa22.89■■□□□ 1.26
PTK7-211ENST00000473339 STRN4Q9NRL3 753 aa22.89■■□□□ 1.25
PTK7-211ENST00000473339 AXIN2Q9Y2T1 843 aa22.89■■□□□ 1.25
PTK7-211ENST00000473339 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
PTK7-211ENST00000473339 USP47Q96K76 1375 aa22.89■■□□□ 1.25
PTK7-211ENST00000473339 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
PTK7-211ENST00000473339 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
PTK7-211ENST00000473339 COL18A1P39060 1754 aa22.88■■□□□ 1.25
PTK7-211ENST00000473339 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
PTK7-211ENST00000473339 CCDC125Q86Z20 511 aa22.87■■□□□ 1.25
PTK7-211ENST00000473339 NFAT5O94916 1531 aa22.87■■□□□ 1.25
PTK7-211ENST00000473339 TMC1Q8TDI8 760 aa22.86■■□□□ 1.25
PTK7-211ENST00000473339 SRCAPQ6ZRS2 3230 aa22.85■■□□□ 1.25
PTK7-211ENST00000473339 BARGINQ6ZT62 677 aa22.85■■□□□ 1.25
PTK7-211ENST00000473339 NME9Q86XW9 330 aa22.85■■□□□ 1.25
PTK7-211ENST00000473339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.85■■□□□ 1.25
PTK7-211ENST00000473339 BLMP54132 1417 aaPredicted RBP22.83■■□□□ 1.25
PTK7-211ENST00000473339 EVA1CP58658 441 aa22.83■■□□□ 1.25
PTK7-211ENST00000473339 EDC4Q6P2E9 1401 aaKnown RBP22.82■■□□□ 1.24
PTK7-211ENST00000473339 USP54Q70EL1 1684 aa22.82■■□□□ 1.24
PTK7-211ENST00000473339 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
PTK7-211ENST00000473339 KCNH5Q8NCM2 988 aa22.82■■□□□ 1.24
PTK7-211ENST00000473339 SLC24A1O60721 1099 aa22.81■■□□□ 1.24
PTK7-211ENST00000473339 HDGFL2Q7Z4V5 671 aaPredicted RBP22.81■■□□□ 1.24
PTK7-211ENST00000473339 USP35Q9P2H5 1018 aa22.81■■□□□ 1.24
PTK7-211ENST00000473339 NINLQ9Y2I6 1382 aa22.8■■□□□ 1.24
PTK7-211ENST00000473339 TCP11L2Q8N4U5 519 aa22.8■■□□□ 1.24
PTK7-211ENST00000473339 TERF2IPQ9NYB0 399 aa22.8■■□□□ 1.24
PTK7-211ENST00000473339 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
PTK7-211ENST00000473339 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
PTK7-211ENST00000473339 A0A0G2JS52 829 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms