RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 ALS2Q96Q42 1657 aa16.46■□□□□ 0.23
ACTB-209ENST00000473257 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
ACTB-209ENST00000473257 NRAPQ86VF7 1730 aa16.45■□□□□ 0.22
ACTB-209ENST00000473257 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
ACTB-209ENST00000473257 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
ACTB-209ENST00000473257 CHRNA2Q15822 529 aa16.43■□□□□ 0.22
ACTB-209ENST00000473257 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
ACTB-209ENST00000473257 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
ACTB-209ENST00000473257 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
ACTB-209ENST00000473257 CRYBG1Q9Y4K1 1723 aa16.41■□□□□ 0.22
ACTB-209ENST00000473257 ATP7BP35670 1465 aa16.41■□□□□ 0.22
ACTB-209ENST00000473257 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
ACTB-209ENST00000473257 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
ACTB-209ENST00000473257 SPATA31A5Q5VU36 1347 aa16.4■□□□□ 0.22
ACTB-209ENST00000473257 SPATA31A7Q8IWB4 1347 aa16.4■□□□□ 0.22
ACTB-209ENST00000473257 EIF3AQ14152 1382 aaKnown RBP16.39■□□□□ 0.21
ACTB-209ENST00000473257 KIAA0232Q92628 1395 aa16.39■□□□□ 0.21
ACTB-209ENST00000473257 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
ACTB-209ENST00000473257 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
ACTB-209ENST00000473257 STRN4Q9NRL3 753 aa16.39■□□□□ 0.21
ACTB-209ENST00000473257 EN1Q05925 392 aaPredicted RBP16.38■□□□□ 0.21
ACTB-209ENST00000473257 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
ACTB-209ENST00000473257 ACEP12821 1306 aa16.36■□□□□ 0.21
ACTB-209ENST00000473257 PHRF1Q9P1Y6 1649 aaKnown RBP16.34■□□□□ 0.21
ACTB-209ENST00000473257 BAG6P46379 1132 aa16.34■□□□□ 0.21
ACTB-209ENST00000473257 NBPF8Q3BBV2 869 aa16.34■□□□□ 0.21
ACTB-209ENST00000473257 SPATA31A1Q5TZJ5 1347 aa16.34■□□□□ 0.21
ACTB-209ENST00000473257 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
ACTB-209ENST00000473257 ITSN1Q15811 1721 aa16.33■□□□□ 0.2
ACTB-209ENST00000473257 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
ACTB-209ENST00000473257 TOPAZ1Q8N9V7 1692 aa16.31■□□□□ 0.2
ACTB-209ENST00000473257 TRIM37O94972 964 aa16.31■□□□□ 0.2
ACTB-209ENST00000473257 HRCP23327 699 aa16.31■□□□□ 0.2
ACTB-209ENST00000473257 EZH2Q15910 746 aaKnown RBP16.31■□□□□ 0.2
ACTB-209ENST00000473257 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
ACTB-209ENST00000473257 POLR3AO14802 1390 aaPredicted RBP16.3■□□□□ 0.2
ACTB-209ENST00000473257 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
ACTB-209ENST00000473257 ABTB2Q8N961 1025 aa16.3■□□□□ 0.2
ACTB-209ENST00000473257 STAC3Q96MF2 364 aa16.3■□□□□ 0.2
ACTB-209ENST00000473257 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
ACTB-209ENST00000473257 TNS1Q9HBL0 1735 aaKnown RBP16.29■□□□□ 0.2
ACTB-209ENST00000473257 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
ACTB-209ENST00000473257 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
ACTB-209ENST00000473257 EVA1CP58658 441 aa16.29■□□□□ 0.2
ACTB-209ENST00000473257 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
ACTB-209ENST00000473257 CAMTA1Q9Y6Y1 1673 aa16.29■□□□□ 0.2
ACTB-209ENST00000473257 RGPD1P0DJD0 1748 aa16.28■□□□□ 0.2
ACTB-209ENST00000473257 NRKQ7Z2Y5 1582 aa16.28■□□□□ 0.2
ACTB-209ENST00000473257 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
ACTB-209ENST00000473257 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
ACTB-209ENST00000473257 LRP5O75197 1615 aa16.26■□□□□ 0.19
ACTB-209ENST00000473257 USP19O94966 1318 aa16.25■□□□□ 0.19
ACTB-209ENST00000473257 CENPJQ9HC77 1338 aaPredicted RBP16.25■□□□□ 0.19
ACTB-209ENST00000473257 APBA3O96018 575 aa16.25■□□□□ 0.19
ACTB-209ENST00000473257 CAMKK2Q96RR4 588 aa16.25■□□□□ 0.19
ACTB-209ENST00000473257 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
ACTB-209ENST00000473257 GCP02774 474 aa16.24■□□□□ 0.19
ACTB-209ENST00000473257 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
ACTB-209ENST00000473257 FAM196AQ6ZSG2 479 aa16.23■□□□□ 0.19
ACTB-209ENST00000473257 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
ACTB-209ENST00000473257 LMO7Q8WWI1 1683 aa16.23■□□□□ 0.19
ACTB-209ENST00000473257 DISP2A7MBM2 1401 aa16.22■□□□□ 0.19
ACTB-209ENST00000473257 QRICH2Q9H0J4 1663 aa16.22■□□□□ 0.19
ACTB-209ENST00000473257 PDE3BQ13370 1112 aa16.22■□□□□ 0.19
ACTB-209ENST00000473257 TCP11L2Q8N4U5 519 aa16.22■□□□□ 0.19
ACTB-209ENST00000473257 L3MBTL2Q969R5 705 aa16.22■□□□□ 0.19
ACTB-209ENST00000473257 BARGINQ6ZT62 677 aa16.21■□□□□ 0.19
ACTB-209ENST00000473257 CPDO75976 1380 aa16.21■□□□□ 0.19
ACTB-209ENST00000473257 NLRP6P59044 892 aa16.2■□□□□ 0.18
ACTB-209ENST00000473257 NLRP13Q86W25 1043 aa16.2■□□□□ 0.18
ACTB-209ENST00000473257 COL5A2P05997 1499 aaPredicted RBP16.19■□□□□ 0.18
ACTB-209ENST00000473257 SOX12O15370 315 aa16.19■□□□□ 0.18
ACTB-209ENST00000473257 NEUROD1Q13562 356 aa16.18■□□□□ 0.18
ACTB-209ENST00000473257 PTF1AQ7RTS3 328 aa16.18■□□□□ 0.18
ACTB-209ENST00000473257 USP6P35125 1406 aa16.18■□□□□ 0.18
ACTB-209ENST00000473257 AXIN2Q9Y2T1 843 aa16.17■□□□□ 0.18
ACTB-209ENST00000473257 PIK3C2AO00443 1686 aa16.15■□□□□ 0.18
ACTB-209ENST00000473257 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
ACTB-209ENST00000473257 RREB1Q92766 1687 aa16.14■□□□□ 0.17
ACTB-209ENST00000473257 SLIT3O75094 1523 aa16.14■□□□□ 0.17
ACTB-209ENST00000473257 CRB1P82279 1406 aa16.13■□□□□ 0.17
ACTB-209ENST00000473257 TOM1L2Q6ZVM7 507 aa16.13■□□□□ 0.17
ACTB-209ENST00000473257 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
ACTB-209ENST00000473257 TRPM1Q7Z4N2 1603 aa16.12■□□□□ 0.17
ACTB-209ENST00000473257 PARP4Q9UKK3 1724 aaKnown RBP16.12■□□□□ 0.17
ACTB-209ENST00000473257 THRAP3Q9Y2W1 955 aaKnown RBP16.12■□□□□ 0.17
ACTB-209ENST00000473257 COL18A1P39060 1754 aa16.12■□□□□ 0.17
ACTB-209ENST00000473257 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
ACTB-209ENST00000473257 EVC2Q86UK5 1308 aa16.12■□□□□ 0.17
ACTB-209ENST00000473257 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
ACTB-209ENST00000473257 ROCK2O75116 1388 aaKnown RBP16.11■□□□□ 0.17
ACTB-209ENST00000473257 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
ACTB-209ENST00000473257 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
ACTB-209ENST00000473257 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
ACTB-209ENST00000473257 DDB1Q16531 1140 aa16.09■□□□□ 0.17
ACTB-209ENST00000473257 MARCH10Q8NA82 808 aaPredicted RBP16.09■□□□□ 0.17
ACTB-209ENST00000473257 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
ACTB-209ENST00000473257 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
ACTB-209ENST00000473257 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
ACTB-209ENST00000473257 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 271.2 ms