RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
C9orf85-204ENST00000473252 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
C9orf85-204ENST00000473252 QTRT2Q9H974 415 aaKnown RBP18.03■□□□□ 0.48
C9orf85-204ENST00000473252 USP21Q9UK80 565 aa18.03■□□□□ 0.48
C9orf85-204ENST00000473252 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.03■□□□□ 0.48
C9orf85-204ENST00000473252 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
C9orf85-204ENST00000473252 RBM6P78332 1123 aaKnown RBP18.02■□□□□ 0.48
C9orf85-204ENST00000473252 CARD11Q9BXL7 1154 aa18.02■□□□□ 0.48
C9orf85-204ENST00000473252 TRPC5Q9UL62 973 aaPredicted RBP18.02■□□□□ 0.48
C9orf85-204ENST00000473252 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.47
C9orf85-204ENST00000473252 HAP1P54257 671 aaPredicted RBP18.01■□□□□ 0.47
C9orf85-204ENST00000473252 ACEP12821 1306 aa18■□□□□ 0.47
C9orf85-204ENST00000473252 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
C9orf85-204ENST00000473252 NWD2Q9ULI1 1742 aa18■□□□□ 0.47
C9orf85-204ENST00000473252 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
C9orf85-204ENST00000473252 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
C9orf85-204ENST00000473252 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
C9orf85-204ENST00000473252 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
C9orf85-204ENST00000473252 SLIT2O94813 1529 aa17.98■□□□□ 0.47
C9orf85-204ENST00000473252 CRYBG1Q9Y4K1 1723 aa17.98■□□□□ 0.47
C9orf85-204ENST00000473252 BCL9LQ86UU0 1499 aa17.98■□□□□ 0.47
C9orf85-204ENST00000473252 ATRNO75882 1429 aa17.98■□□□□ 0.47
C9orf85-204ENST00000473252 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
C9orf85-204ENST00000473252 ATAD2Q6PL18 1390 aa17.96■□□□□ 0.47
C9orf85-204ENST00000473252 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
C9orf85-204ENST00000473252 CABLES1Q8TDN4 633 aa17.95■□□□□ 0.46
C9orf85-204ENST00000473252 PLCH1Q4KWH8 1693 aa17.95■□□□□ 0.46
C9orf85-204ENST00000473252 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
C9orf85-204ENST00000473252 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
C9orf85-204ENST00000473252 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
C9orf85-204ENST00000473252 COL14A1Q05707 1796 aaKnown RBP17.94■□□□□ 0.46
C9orf85-204ENST00000473252 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
C9orf85-204ENST00000473252 PHRF1Q9P1Y6 1649 aaKnown RBP17.92■□□□□ 0.46
C9orf85-204ENST00000473252 USP6P35125 1406 aa17.91■□□□□ 0.46
C9orf85-204ENST00000473252 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
C9orf85-204ENST00000473252 GJD4Q96KN9 370 aaPredicted RBP17.91■□□□□ 0.46
C9orf85-204ENST00000473252 RGS12O14924 1447 aa17.9■□□□□ 0.46
C9orf85-204ENST00000473252 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
C9orf85-204ENST00000473252 FAM83GA6ND36 823 aa17.89■□□□□ 0.45
C9orf85-204ENST00000473252 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
C9orf85-204ENST00000473252 SSH2Q76I76 1423 aa17.89■□□□□ 0.45
C9orf85-204ENST00000473252 VPS72Q15906 364 aa17.88■□□□□ 0.45
C9orf85-204ENST00000473252 DCAF8L1A6NGE4 600 aa17.87■□□□□ 0.45
C9orf85-204ENST00000473252 USP19O94966 1318 aa17.87■□□□□ 0.45
C9orf85-204ENST00000473252 CPSF1Q10570 1443 aaKnown RBP17.87■□□□□ 0.45
C9orf85-204ENST00000473252 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
C9orf85-204ENST00000473252 GLI3P10071 1580 aa17.86■□□□□ 0.45
C9orf85-204ENST00000473252 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
C9orf85-204ENST00000473252 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
C9orf85-204ENST00000473252 NRKQ7Z2Y5 1582 aa17.85■□□□□ 0.45
C9orf85-204ENST00000473252 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
C9orf85-204ENST00000473252 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
C9orf85-204ENST00000473252 CPDO75976 1380 aa17.84■□□□□ 0.45
C9orf85-204ENST00000473252 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
C9orf85-204ENST00000473252 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
C9orf85-204ENST00000473252 TESK2Q96S53 571 aa17.84■□□□□ 0.45
C9orf85-204ENST00000473252 BTG4Q9NY30 223 aa17.84■□□□□ 0.45
C9orf85-204ENST00000473252 ONECUT3O60422 494 aaPredicted RBP17.83■□□□□ 0.44
C9orf85-204ENST00000473252 KIAA0232Q92628 1395 aa17.82■□□□□ 0.44
C9orf85-204ENST00000473252 USP47Q96K76 1375 aa17.82■□□□□ 0.44
C9orf85-204ENST00000473252 TTC21BQ7Z4L5 1316 aa17.82■□□□□ 0.44
C9orf85-204ENST00000473252 GCP02774 474 aa17.82■□□□□ 0.44
C9orf85-204ENST00000473252 NUTM2GQ5VZR2 741 aa17.82■□□□□ 0.44
C9orf85-204ENST00000473252 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
C9orf85-204ENST00000473252 PIK3C2AO00443 1686 aa17.82■□□□□ 0.44
C9orf85-204ENST00000473252 SLIT3O75094 1523 aa17.82■□□□□ 0.44
C9orf85-204ENST00000473252 KTN1Q86UP2 1357 aaKnown RBP17.81■□□□□ 0.44
C9orf85-204ENST00000473252 NLRP6P59044 892 aa17.81■□□□□ 0.44
C9orf85-204ENST00000473252 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
C9orf85-204ENST00000473252 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
C9orf85-204ENST00000473252 ZC3H6P61129 1189 aaKnown RBP17.79■□□□□ 0.44
C9orf85-204ENST00000473252 TMF1P82094 1093 aa17.79■□□□□ 0.44
C9orf85-204ENST00000473252 CDCA8Q53HL2 280 aa17.79■□□□□ 0.44
C9orf85-204ENST00000473252 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
C9orf85-204ENST00000473252 CCDC9Q9Y3X0 531 aaKnown RBP17.79■□□□□ 0.44
C9orf85-204ENST00000473252 CD163L1Q9NR16 1453 aa17.79■□□□□ 0.44
C9orf85-204ENST00000473252 USP54Q70EL1 1684 aa17.79■□□□□ 0.44
C9orf85-204ENST00000473252 LMO7Q8WWI1 1683 aa17.78■□□□□ 0.44
C9orf85-204ENST00000473252 TMC1Q8TDI8 760 aa17.78■□□□□ 0.44
C9orf85-204ENST00000473252 BRWD3Q6RI45 1802 aa17.77■□□□□ 0.44
C9orf85-204ENST00000473252 SLC12A5Q9H2X9 1139 aa17.77■□□□□ 0.44
C9orf85-204ENST00000473252 SPATA31A5Q5VU36 1347 aa17.76■□□□□ 0.43
C9orf85-204ENST00000473252 SPATA31A7Q8IWB4 1347 aa17.76■□□□□ 0.43
C9orf85-204ENST00000473252 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
C9orf85-204ENST00000473252 USP31Q70CQ4 1352 aa17.76■□□□□ 0.43
C9orf85-204ENST00000473252 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
C9orf85-204ENST00000473252 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
C9orf85-204ENST00000473252 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
C9orf85-204ENST00000473252 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
C9orf85-204ENST00000473252 CAMTA1Q9Y6Y1 1673 aa17.74■□□□□ 0.43
C9orf85-204ENST00000473252 EVA1CP58658 441 aa17.74■□□□□ 0.43
C9orf85-204ENST00000473252 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
C9orf85-204ENST00000473252 COL18A1P39060 1754 aa17.73■□□□□ 0.43
C9orf85-204ENST00000473252 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
C9orf85-204ENST00000473252 ABCC6O95255 1503 aa17.72■□□□□ 0.43
C9orf85-204ENST00000473252 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
C9orf85-204ENST00000473252 ANKRD36BQ8N2N9 1353 aa17.71■□□□□ 0.43
C9orf85-204ENST00000473252 STRN4Q9NRL3 753 aa17.71■□□□□ 0.43
C9orf85-204ENST00000473252 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
C9orf85-204ENST00000473252 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms