RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
TRAIP-203ENST00000473195 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
TRAIP-203ENST00000473195 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
TRAIP-203ENST00000473195 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
TRAIP-203ENST00000473195 FAM83GA6ND36 823 aa17.51■□□□□ 0.39
TRAIP-203ENST00000473195 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
TRAIP-203ENST00000473195 L3MBTL2Q969R5 705 aa17.51■□□□□ 0.39
TRAIP-203ENST00000473195 CCDC9Q9Y3X0 531 aaKnown RBP17.5■□□□□ 0.39
TRAIP-203ENST00000473195 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
TRAIP-203ENST00000473195 ACEP12821 1306 aa17.47■□□□□ 0.39
TRAIP-203ENST00000473195 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
TRAIP-203ENST00000473195 VPS72Q15906 364 aa17.46■□□□□ 0.39
TRAIP-203ENST00000473195 CABP2Q9NPB3 220 aa17.46■□□□□ 0.39
TRAIP-203ENST00000473195 BTG4Q9NY30 223 aa17.46■□□□□ 0.39
TRAIP-203ENST00000473195 POLR3AO14802 1390 aaPredicted RBP17.44■□□□□ 0.38
TRAIP-203ENST00000473195 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
TRAIP-203ENST00000473195 SEPT12Q8IYM1 358 aa17.44■□□□□ 0.38
TRAIP-203ENST00000473195 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
TRAIP-203ENST00000473195 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
TRAIP-203ENST00000473195 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
TRAIP-203ENST00000473195 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
TRAIP-203ENST00000473195 CHRNA2Q15822 529 aa17.42■□□□□ 0.38
TRAIP-203ENST00000473195 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
TRAIP-203ENST00000473195 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
TRAIP-203ENST00000473195 A0A0G2JS52 829 aa17.41■□□□□ 0.38
TRAIP-203ENST00000473195 PLEKHG3A1L390 1219 aa17.41■□□□□ 0.38
TRAIP-203ENST00000473195 ZC3H6P61129 1189 aaKnown RBP17.41■□□□□ 0.38
TRAIP-203ENST00000473195 MYT1Q01538 1121 aa17.41■□□□□ 0.38
TRAIP-203ENST00000473195 FAM98CQ17RN3 349 aaKnown RBP17.4■□□□□ 0.38
TRAIP-203ENST00000473195 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
TRAIP-203ENST00000473195 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
TRAIP-203ENST00000473195 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
TRAIP-203ENST00000473195 ABTB2Q8N961 1025 aa17.38■□□□□ 0.37
TRAIP-203ENST00000473195 PIK3C2AO00443 1686 aa17.38■□□□□ 0.37
TRAIP-203ENST00000473195 LMO7Q8WWI1 1683 aa17.38■□□□□ 0.37
TRAIP-203ENST00000473195 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
TRAIP-203ENST00000473195 ONECUT3O60422 494 aaPredicted RBP17.37■□□□□ 0.37
TRAIP-203ENST00000473195 FAM182BQ5T319 152 aa17.37■□□□□ 0.37
TRAIP-203ENST00000473195 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
TRAIP-203ENST00000473195 STRN4Q9NRL3 753 aa17.37■□□□□ 0.37
TRAIP-203ENST00000473195 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
TRAIP-203ENST00000473195 DEFB132Q7Z7B7 95 aa17.36■□□□□ 0.37
TRAIP-203ENST00000473195 SPATA31A5Q5VU36 1347 aa17.36■□□□□ 0.37
TRAIP-203ENST00000473195 SPATA31A7Q8IWB4 1347 aa17.36■□□□□ 0.37
TRAIP-203ENST00000473195 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
TRAIP-203ENST00000473195 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
TRAIP-203ENST00000473195 RGPD1P0DJD0 1748 aa17.34■□□□□ 0.37
TRAIP-203ENST00000473195 TNS1Q9HBL0 1735 aaKnown RBP17.33■□□□□ 0.37
TRAIP-203ENST00000473195 USP6P35125 1406 aa17.33■□□□□ 0.36
TRAIP-203ENST00000473195 EVC2Q86UK5 1308 aa17.33■□□□□ 0.36
TRAIP-203ENST00000473195 CCDC125Q86Z20 511 aa17.33■□□□□ 0.36
TRAIP-203ENST00000473195 USP19O94966 1318 aa17.32■□□□□ 0.36
TRAIP-203ENST00000473195 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
TRAIP-203ENST00000473195 MON2Q7Z3U7 1717 aa17.32■□□□□ 0.36
TRAIP-203ENST00000473195 SPATA31A1Q5TZJ5 1347 aa17.31■□□□□ 0.36
TRAIP-203ENST00000473195 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
TRAIP-203ENST00000473195 COL18A1P39060 1754 aa17.3■□□□□ 0.36
TRAIP-203ENST00000473195 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
TRAIP-203ENST00000473195 SLIT3O75094 1523 aa17.3■□□□□ 0.36
TRAIP-203ENST00000473195 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
TRAIP-203ENST00000473195 GCP02774 474 aa17.29■□□□□ 0.36
TRAIP-203ENST00000473195 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
TRAIP-203ENST00000473195 WNK3Q9BYP7 1800 aa17.28■□□□□ 0.36
TRAIP-203ENST00000473195 EVA1CP58658 441 aa17.28■□□□□ 0.36
TRAIP-203ENST00000473195 NLRP6P59044 892 aa17.28■□□□□ 0.36
TRAIP-203ENST00000473195 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
TRAIP-203ENST00000473195 LARP1Q6PKG0 1096 aaKnown RBP17.28■□□□□ 0.36
TRAIP-203ENST00000473195 ZRANB1Q9UGI0 708 aa17.28■□□□□ 0.36
TRAIP-203ENST00000473195 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.36
TRAIP-203ENST00000473195 CPDO75976 1380 aa17.27■□□□□ 0.35
TRAIP-203ENST00000473195 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
TRAIP-203ENST00000473195 LRP5O75197 1615 aa17.26■□□□□ 0.35
TRAIP-203ENST00000473195 PARP4Q9UKK3 1724 aaKnown RBP17.25■□□□□ 0.35
TRAIP-203ENST00000473195 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-203ENST00000473195 LTN1O94822 1766 aa17.25■□□□□ 0.35
TRAIP-203ENST00000473195 SOX12O15370 315 aa17.24■□□□□ 0.35
TRAIP-203ENST00000473195 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
TRAIP-203ENST00000473195 TTC21BQ7Z4L5 1316 aa17.23■□□□□ 0.35
TRAIP-203ENST00000473195 CPSF1Q10570 1443 aaKnown RBP17.22■□□□□ 0.35
TRAIP-203ENST00000473195 SBF2Q86WG5 1849 aa17.22■□□□□ 0.35
TRAIP-203ENST00000473195 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
TRAIP-203ENST00000473195 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
TRAIP-203ENST00000473195 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
TRAIP-203ENST00000473195 BAG6P46379 1132 aa17.21■□□□□ 0.35
TRAIP-203ENST00000473195 EN1Q05925 392 aaPredicted RBP17.21■□□□□ 0.35
TRAIP-203ENST00000473195 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
TRAIP-203ENST00000473195 SBNO2Q9Y2G9 1366 aa17.2■□□□□ 0.34
TRAIP-203ENST00000473195 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
TRAIP-203ENST00000473195 TRIM37O94972 964 aa17.19■□□□□ 0.34
TRAIP-203ENST00000473195 BARGINQ6ZT62 677 aa17.19■□□□□ 0.34
TRAIP-203ENST00000473195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRAIP-203ENST00000473195 TCP11L2Q8N4U5 519 aa17.19■□□□□ 0.34
TRAIP-203ENST00000473195 AXIN2Q9Y2T1 843 aa17.19■□□□□ 0.34
TRAIP-203ENST00000473195 NFAT5O94916 1531 aa17.19■□□□□ 0.34
TRAIP-203ENST00000473195 CRB1P82279 1406 aa17.19■□□□□ 0.34
TRAIP-203ENST00000473195 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
TRAIP-203ENST00000473195 RREB1Q92766 1687 aa17.18■□□□□ 0.34
TRAIP-203ENST00000473195 PSDA5PKW4 1024 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-203ENST00000473195 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
TRAIP-203ENST00000473195 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms