RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 ALDH1A1P00352 501 aa6.61□□□□□ -1.35
RGPD6-208ENST00000473101 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
RGPD6-208ENST00000473101 LINC01559Q495D7 138 aa6.61□□□□□ -1.35
RGPD6-208ENST00000473101 EHBP1Q8NDI1 1231 aa6.61□□□□□ -1.35
RGPD6-208ENST00000473101 A6NJR5 290 aa6.6□□□□□ -1.35
RGPD6-208ENST00000473101 ARID3CA6NKF2 412 aa6.6□□□□□ -1.35
RGPD6-208ENST00000473101 PTPRNQ16849 979 aa6.6□□□□□ -1.35
RGPD6-208ENST00000473101 CSPP1Q1MSJ5 1256 aa6.6□□□□□ -1.35
RGPD6-208ENST00000473101 RSBN1LQ6PCB5 846 aaPredicted RBP6.6□□□□□ -1.35
RGPD6-208ENST00000473101 C1orf115Q9H7X2 142 aa6.6□□□□□ -1.35
RGPD6-208ENST00000473101 PCDHB15Q9Y5E8 787 aa6.6□□□□□ -1.35
RGPD6-208ENST00000473101 SH3BP2P78314 561 aa6.59□□□□□ -1.35
RGPD6-208ENST00000473101 UNC93B1Q9H1C4 597 aa6.59□□□□□ -1.35
RGPD6-208ENST00000473101 EVA1BQ9NVM1 165 aa6.59□□□□□ -1.35
RGPD6-208ENST00000473101 SPDYE5A6NIY4 337 aa6.58□□□□□ -1.36
RGPD6-208ENST00000473101 KCNH2Q12809 1159 aa6.58□□□□□ -1.36
RGPD6-208ENST00000473101 DIXDC1Q155Q3 683 aa6.58□□□□□ -1.36
RGPD6-208ENST00000473101 BAP1Q92560 729 aa6.58□□□□□ -1.36
RGPD6-208ENST00000473101 CLUAP1Q96AJ1 413 aa6.58□□□□□ -1.36
RGPD6-208ENST00000473101 ATP13A2Q9NQ11 1180 aa6.58□□□□□ -1.36
RGPD6-208ENST00000473101 CFAP99D6REC4 459 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 SPTLC1O15269 473 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 TRAK2O60296 914 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 CTHP32929 405 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 MCM6Q14566 821 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 RIC3Q7Z5B4 369 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 CABLES1Q8TDN4 633 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 POLR3EQ9NVU0 708 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 WASF2Q9Y6W5 498 aa6.57□□□□□ -1.36
RGPD6-208ENST00000473101 HRCP23327 699 aa6.56□□□□□ -1.36
RGPD6-208ENST00000473101 GJA5P36382 358 aa6.56□□□□□ -1.36
RGPD6-208ENST00000473101 DESI1Q6ICB0 168 aa6.56□□□□□ -1.36
RGPD6-208ENST00000473101 PROCA1Q8NCQ7 364 aaPredicted RBP6.56□□□□□ -1.36
RGPD6-208ENST00000473101 TSC1Q92574 1164 aa6.56□□□□□ -1.36
RGPD6-208ENST00000473101 ZBTB3Q9H5J0 574 aa6.56□□□□□ -1.36
RGPD6-208ENST00000473101 TLL2Q9Y6L7 1015 aa6.56□□□□□ -1.36
RGPD6-208ENST00000473101 SIAH2O43255 324 aa6.55□□□□□ -1.36
RGPD6-208ENST00000473101 SNRPBP14678 240 aaKnown RBP6.55□□□□□ -1.36
RGPD6-208ENST00000473101 ZNF511Q8NB15 262 aa6.55□□□□□ -1.36
RGPD6-208ENST00000473101 PODXL2Q9NZ53 605 aa6.55□□□□□ -1.36
RGPD6-208ENST00000473101 RAD21O60216 631 aa6.54□□□□□ -1.36
RGPD6-208ENST00000473101 MYSM1Q5VVJ2 828 aa6.54□□□□□ -1.36
RGPD6-208ENST00000473101 LYPD8Q6UX82 237 aa6.54□□□□□ -1.36
RGPD6-208ENST00000473101 TREML4Q6UXN2 200 aa6.54□□□□□ -1.36
RGPD6-208ENST00000473101 MAP10Q9P2G4 905 aa6.54□□□□□ -1.36
RGPD6-208ENST00000473101 STK17AQ9UEE5 414 aa6.54□□□□□ -1.36
RGPD6-208ENST00000473101 LIMD1Q9UGP4 676 aa6.54□□□□□ -1.36
RGPD6-208ENST00000473101 NUTM2BA6NNL0 878 aaPredicted RBP6.53□□□□□ -1.36
RGPD6-208ENST00000473101 NUTM2EB1AL46 878 aaPredicted RBP6.53□□□□□ -1.36
RGPD6-208ENST00000473101 BMP1P13497 986 aa6.53□□□□□ -1.36
RGPD6-208ENST00000473101 NUTM2DQ5VT03 806 aaPredicted RBP6.53□□□□□ -1.36
RGPD6-208ENST00000473101 NUTM2AQ8IVF1 878 aaPredicted RBP6.53□□□□□ -1.36
RGPD6-208ENST00000473101 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.53□□□□□ -1.36
RGPD6-208ENST00000473101 SENP2Q9HC62 589 aa6.53□□□□□ -1.36
RGPD6-208ENST00000473101 CAPN5O15484 640 aaPredicted RBP6.52□□□□□ -1.37
RGPD6-208ENST00000473101 CLK2P49760 499 aaKnown RBP6.52□□□□□ -1.37
RGPD6-208ENST00000473101 QPCTQ16769 361 aa6.52□□□□□ -1.37
RGPD6-208ENST00000473101 PRPF38BQ5VTL8 546 aaKnown RBP6.52□□□□□ -1.37
RGPD6-208ENST00000473101 PROSER2Q86WR7 435 aaPredicted RBP6.52□□□□□ -1.37
RGPD6-208ENST00000473101 TRIM47Q96LD4 638 aa6.52□□□□□ -1.37
RGPD6-208ENST00000473101 PER1O15534 1290 aaPredicted RBP6.51□□□□□ -1.37
RGPD6-208ENST00000473101 WFS1O76024 890 aa6.51□□□□□ -1.37
RGPD6-208ENST00000473101 VARSP26640 1264 aaKnown RBP6.51□□□□□ -1.37
RGPD6-208ENST00000473101 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
RGPD6-208ENST00000473101 CCDC82Q8N4S0 544 aa6.51□□□□□ -1.37
RGPD6-208ENST00000473101 BANK1Q8NDB2 785 aa6.51□□□□□ -1.37
RGPD6-208ENST00000473101 FOXJ1Q92949 421 aa6.51□□□□□ -1.37
RGPD6-208ENST00000473101 F12P00748 615 aaPredicted RBP6.5□□□□□ -1.37
RGPD6-208ENST00000473101 ARID5BQ14865 1188 aa6.5□□□□□ -1.37
RGPD6-208ENST00000473101 ZNF777Q9ULD5 760 aaPredicted RBP6.5□□□□□ -1.37
RGPD6-208ENST00000473101 RFC5P40937 340 aa6.49□□□□□ -1.37
RGPD6-208ENST00000473101 TRIM26Q12899 539 aaPredicted RBP6.49□□□□□ -1.37
RGPD6-208ENST00000473101 NNTQ13423 1086 aa6.49□□□□□ -1.37
RGPD6-208ENST00000473101 AGERQ15109 404 aa6.49□□□□□ -1.37
RGPD6-208ENST00000473101 TMEM259Q4ZIN3 620 aa6.49□□□□□ -1.37
RGPD6-208ENST00000473101 RTL5Q5HYW3 569 aaPredicted RBP6.49□□□□□ -1.37
RGPD6-208ENST00000473101 FAM174AQ8TBP5 190 aa6.49□□□□□ -1.37
RGPD6-208ENST00000473101 KIFC2Q96AC6 838 aa6.49□□□□□ -1.37
RGPD6-208ENST00000473101 POM121Q96HA1 1249 aa6.49□□□□□ -1.37
RGPD6-208ENST00000473101 LILRB3O75022 631 aa6.48□□□□□ -1.37
RGPD6-208ENST00000473101 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
RGPD6-208ENST00000473101 NFX1Q12986 1120 aaKnown RBP6.48□□□□□ -1.37
RGPD6-208ENST00000473101 TRIM46Q7Z4K8 759 aa6.48□□□□□ -1.37
RGPD6-208ENST00000473101 FNBP4Q8N3X1 1017 aaPredicted RBP6.48□□□□□ -1.37
RGPD6-208ENST00000473101 PPP2R2DQ66LE6 453 aa6.47□□□□□ -1.37
RGPD6-208ENST00000473101 HELBQ8NG08 1087 aaPredicted RBP6.47□□□□□ -1.37
RGPD6-208ENST00000473101 CCDC97Q96F63 343 aaPredicted RBP6.47□□□□□ -1.37
RGPD6-208ENST00000473101 SERPINA10Q9UK55 444 aa6.47□□□□□ -1.37
RGPD6-208ENST00000473101 ADH1CP00326 375 aa6.46□□□□□ -1.38
RGPD6-208ENST00000473101 WDR4P57081 412 aaKnown RBP6.46□□□□□ -1.38
RGPD6-208ENST00000473101 TUSC1Q2TAM9 212 aa6.46□□□□□ -1.38
RGPD6-208ENST00000473101 SNRKQ9NRH2 765 aa6.46□□□□□ -1.38
RGPD6-208ENST00000473101 COG6Q9Y2V7 657 aa6.46□□□□□ -1.38
RGPD6-208ENST00000473101 TERTO14746 1132 aaKnown RBP6.45□□□□□ -1.38
RGPD6-208ENST00000473101 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
RGPD6-208ENST00000473101 BPHLQ86WA6 291 aaPredicted RBP6.45□□□□□ -1.38
RGPD6-208ENST00000473101 MPNDQ8N594 471 aa6.45□□□□□ -1.38
RGPD6-208ENST00000473101 ZNF330Q9Y3S2 320 aaPredicted RBP6.45□□□□□ -1.38
RGPD6-208ENST00000473101 TIMP2P16035 220 aa6.44□□□□□ -1.38
RGPD6-208ENST00000473101 WWC1Q8IX03 1113 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms