RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
SMC4-214ENST00000472991 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
SMC4-214ENST00000472991 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
SMC4-214ENST00000472991 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
SMC4-214ENST00000472991 KCNA6P17658 529 aa13.08□□□□□ -0.32
SMC4-214ENST00000472991 CFAP70Q5T0N1 1121 aa13.08□□□□□ -0.32
SMC4-214ENST00000472991 DPY19L2Q6NUT2 758 aa13.07□□□□□ -0.32
SMC4-214ENST00000472991 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
SMC4-214ENST00000472991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
SMC4-214ENST00000472991 EFCAB3Q8N7B9 438 aa13.06□□□□□ -0.32
SMC4-214ENST00000472991 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
SMC4-214ENST00000472991 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
SMC4-214ENST00000472991 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
SMC4-214ENST00000472991 TMEM132EQ6IEE7 984 aa13.05□□□□□ -0.32
SMC4-214ENST00000472991 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
SMC4-214ENST00000472991 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
SMC4-214ENST00000472991 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
SMC4-214ENST00000472991 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
SMC4-214ENST00000472991 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
SMC4-214ENST00000472991 TMEM94Q12767 1356 aa13.04□□□□□ -0.32
SMC4-214ENST00000472991 TECPR2O15040 1411 aa13.04□□□□□ -0.32
SMC4-214ENST00000472991 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
SMC4-214ENST00000472991 PROSER2Q86WR7 435 aaPredicted RBP13.03□□□□□ -0.32
SMC4-214ENST00000472991 DLC1Q96QB1 1528 aa13.03□□□□□ -0.32
SMC4-214ENST00000472991 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
SMC4-214ENST00000472991 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
SMC4-214ENST00000472991 STK26Q9P289 416 aa13.02□□□□□ -0.33
SMC4-214ENST00000472991 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
SMC4-214ENST00000472991 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
SMC4-214ENST00000472991 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
SMC4-214ENST00000472991 QRICH2Q9H0J4 1663 aa13.01□□□□□ -0.33
SMC4-214ENST00000472991 ROCK2O75116 1388 aaKnown RBP12.99□□□□□ -0.33
SMC4-214ENST00000472991 NBPF1Q3BBV0 1214 aa12.99□□□□□ -0.33
SMC4-214ENST00000472991 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
SMC4-214ENST00000472991 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
SMC4-214ENST00000472991 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
SMC4-214ENST00000472991 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
SMC4-214ENST00000472991 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
SMC4-214ENST00000472991 RGPD8O14715 1765 aaPredicted RBP12.98□□□□□ -0.33
SMC4-214ENST00000472991 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
SMC4-214ENST00000472991 FAM135BQ49AJ0 1406 aa12.97□□□□□ -0.33
SMC4-214ENST00000472991 MSH6P52701 1360 aa12.97□□□□□ -0.33
SMC4-214ENST00000472991 PLEKHH1Q9ULM0 1364 aa12.97□□□□□ -0.33
SMC4-214ENST00000472991 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
SMC4-214ENST00000472991 ST18O60284 1047 aa12.97□□□□□ -0.33
SMC4-214ENST00000472991 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
SMC4-214ENST00000472991 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
SMC4-214ENST00000472991 GPRASP1Q5JY77 1395 aa12.96□□□□□ -0.33
SMC4-214ENST00000472991 ADGRB2O60241 1585 aa12.96□□□□□ -0.33
SMC4-214ENST00000472991 SOX12O15370 315 aa12.95□□□□□ -0.34
SMC4-214ENST00000472991 WAPLQ7Z5K2 1190 aa12.95□□□□□ -0.34
SMC4-214ENST00000472991 DCCP43146 1447 aa12.95□□□□□ -0.34
SMC4-214ENST00000472991 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
SMC4-214ENST00000472991 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMC4-214ENST00000472991 PRAM1Q96QH2 718 aa12.94□□□□□ -0.34
SMC4-214ENST00000472991 TAOK2Q9UL54 1235 aa12.94□□□□□ -0.34
SMC4-214ENST00000472991 UBAP1LF5GYI3 381 aa12.93□□□□□ -0.34
SMC4-214ENST00000472991 SNPHO15079 494 aa12.93□□□□□ -0.34
SMC4-214ENST00000472991 TMEM121BQ9BXQ6 578 aaPredicted RBP12.93□□□□□ -0.34
SMC4-214ENST00000472991 PCDH10Q9P2E7 1040 aa12.93□□□□□ -0.34
SMC4-214ENST00000472991 G3V3G9 751 aa12.92□□□□□ -0.34
SMC4-214ENST00000472991 SIRT1Q96EB6 747 aa12.92□□□□□ -0.34
SMC4-214ENST00000472991 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
SMC4-214ENST00000472991 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
SMC4-214ENST00000472991 POGKQ9P215 609 aa12.92□□□□□ -0.34
SMC4-214ENST00000472991 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
SMC4-214ENST00000472991 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
SMC4-214ENST00000472991 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
SMC4-214ENST00000472991 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
SMC4-214ENST00000472991 MST1RQ04912 1400 aa12.9□□□□□ -0.34
SMC4-214ENST00000472991 RGL2O15211 777 aa12.9□□□□□ -0.34
SMC4-214ENST00000472991 TOM1O60784 492 aa12.9□□□□□ -0.34
SMC4-214ENST00000472991 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
SMC4-214ENST00000472991 EIF3AQ14152 1382 aaKnown RBP12.9□□□□□ -0.34
SMC4-214ENST00000472991 ATF3P18847 181 aa12.89□□□□□ -0.35
SMC4-214ENST00000472991 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
SMC4-214ENST00000472991 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
SMC4-214ENST00000472991 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
SMC4-214ENST00000472991 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
SMC4-214ENST00000472991 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
SMC4-214ENST00000472991 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
SMC4-214ENST00000472991 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
SMC4-214ENST00000472991 TOPAZ1Q8N9V7 1692 aa12.88□□□□□ -0.35
SMC4-214ENST00000472991 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
SMC4-214ENST00000472991 TULP4Q9NRJ4 1543 aa12.88□□□□□ -0.35
SMC4-214ENST00000472991 STK24Q9Y6E0 443 aa12.87□□□□□ -0.35
SMC4-214ENST00000472991 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
SMC4-214ENST00000472991 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
SMC4-214ENST00000472991 USP47Q96K76 1375 aa12.86□□□□□ -0.35
SMC4-214ENST00000472991 PLSCR2Q9NRY7 297 aa12.86□□□□□ -0.35
SMC4-214ENST00000472991 STK25O00506 426 aa12.85□□□□□ -0.35
SMC4-214ENST00000472991 MICALL2Q8IY33 904 aa12.85□□□□□ -0.35
SMC4-214ENST00000472991 SLAIN2Q9P270 581 aa12.85□□□□□ -0.35
SMC4-214ENST00000472991 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
SMC4-214ENST00000472991 ATP7BP35670 1465 aa12.84□□□□□ -0.35
SMC4-214ENST00000472991 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
SMC4-214ENST00000472991 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
SMC4-214ENST00000472991 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
SMC4-214ENST00000472991 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
SMC4-214ENST00000472991 COL16A1Q07092 1604 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms