RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ONECUT3O60422 494 aaPredicted RBP22.05■■□□□ 1.12
VTI1A-203ENST00000472892 POLR3AO14802 1390 aaPredicted RBP22.04■■□□□ 1.12
VTI1A-203ENST00000472892 CENPJQ9HC77 1338 aaPredicted RBP22.04■■□□□ 1.12
VTI1A-203ENST00000472892 NBPF8Q3BBV2 869 aa22.03■■□□□ 1.12
VTI1A-203ENST00000472892 ACEP12821 1306 aa22.03■■□□□ 1.12
VTI1A-203ENST00000472892 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
VTI1A-203ENST00000472892 NWD2Q9ULI1 1742 aa22.03■■□□□ 1.12
VTI1A-203ENST00000472892 CCDC125Q86Z20 511 aa22.02■■□□□ 1.12
VTI1A-203ENST00000472892 PLCH1Q4KWH8 1693 aa22.01■■□□□ 1.11
VTI1A-203ENST00000472892 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
VTI1A-203ENST00000472892 SEPT12Q8IYM1 358 aa22.01■■□□□ 1.11
VTI1A-203ENST00000472892 BTG4Q9NY30 223 aa22.01■■□□□ 1.11
VTI1A-203ENST00000472892 CCDC9Q9Y3X0 531 aaKnown RBP22■■□□□ 1.11
VTI1A-203ENST00000472892 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
VTI1A-203ENST00000472892 CABP2Q9NPB3 220 aa21.98■■□□□ 1.11
VTI1A-203ENST00000472892 TOPAZ1Q8N9V7 1692 aa21.98■■□□□ 1.11
VTI1A-203ENST00000472892 EP400Q96L91 3159 aa21.97■■□□□ 1.11
VTI1A-203ENST00000472892 CRYBG1Q9Y4K1 1723 aa21.96■■□□□ 1.11
VTI1A-203ENST00000472892 COL14A1Q05707 1796 aaKnown RBP21.96■■□□□ 1.11
VTI1A-203ENST00000472892 PRDM11Q9NQV5 511 aa21.95■■□□□ 1.1
VTI1A-203ENST00000472892 NUTM2GQ5VZR2 741 aa21.94■■□□□ 1.1
VTI1A-203ENST00000472892 PPIP5K1Q6PFW1 1433 aa21.94■■□□□ 1.1
VTI1A-203ENST00000472892 NRAPQ86VF7 1730 aa21.94■■□□□ 1.1
VTI1A-203ENST00000472892 KRT27Q7Z3Y8 459 aa21.93■■□□□ 1.1
VTI1A-203ENST00000472892 ABTB2Q8N961 1025 aa21.93■■□□□ 1.1
VTI1A-203ENST00000472892 TRPM1Q7Z4N2 1603 aa21.92■■□□□ 1.1
VTI1A-203ENST00000472892 KIAA0232Q92628 1395 aa21.92■■□□□ 1.1
VTI1A-203ENST00000472892 ROCK2O75116 1388 aaKnown RBP21.91■■□□□ 1.1
VTI1A-203ENST00000472892 SPATA31A5Q5VU36 1347 aa21.91■■□□□ 1.1
VTI1A-203ENST00000472892 SPATA31A7Q8IWB4 1347 aa21.91■■□□□ 1.1
VTI1A-203ENST00000472892 FAM98CQ17RN3 349 aaKnown RBP21.91■■□□□ 1.1
VTI1A-203ENST00000472892 CABP1Q9NZU7 370 aa21.91■■□□□ 1.1
VTI1A-203ENST00000472892 BRWD3Q6RI45 1802 aa21.91■■□□□ 1.1
VTI1A-203ENST00000472892 BLMP54132 1417 aaPredicted RBP21.9■■□□□ 1.1
VTI1A-203ENST00000472892 EVC2Q86UK5 1308 aa21.9■■□□□ 1.1
VTI1A-203ENST00000472892 ZC3H6P61129 1189 aaKnown RBP21.9■■□□□ 1.1
VTI1A-203ENST00000472892 QRICH2Q9H0J4 1663 aa21.9■■□□□ 1.1
VTI1A-203ENST00000472892 BRD4O60885 1362 aaPredicted RBP21.89■■□□□ 1.1
VTI1A-203ENST00000472892 CHRNA2Q15822 529 aa21.89■■□□□ 1.09
VTI1A-203ENST00000472892 NLRP13Q86W25 1043 aa21.88■■□□□ 1.09
VTI1A-203ENST00000472892 USP19O94966 1318 aa21.87■■□□□ 1.09
VTI1A-203ENST00000472892 PHRF1Q9P1Y6 1649 aaKnown RBP21.87■■□□□ 1.09
VTI1A-203ENST00000472892 A0A0G2JS52 829 aa21.86■■□□□ 1.09
VTI1A-203ENST00000472892 MYT1Q01538 1121 aa21.86■■□□□ 1.09
VTI1A-203ENST00000472892 SPATA31A1Q5TZJ5 1347 aa21.85■■□□□ 1.09
VTI1A-203ENST00000472892 CPDO75976 1380 aa21.85■■□□□ 1.09
VTI1A-203ENST00000472892 GCP02774 474 aa21.84■■□□□ 1.09
VTI1A-203ENST00000472892 ZRANB1Q9UGI0 708 aa21.84■■□□□ 1.09
VTI1A-203ENST00000472892 USP6P35125 1406 aa21.83■■□□□ 1.09
VTI1A-203ENST00000472892 STRN4Q9NRL3 753 aa21.83■■□□□ 1.09
VTI1A-203ENST00000472892 SSH2Q76I76 1423 aa21.82■■□□□ 1.08
VTI1A-203ENST00000472892 SF3B2Q13435 895 aaKnown RBP21.82■■□□□ 1.08
VTI1A-203ENST00000472892 EVA1CP58658 441 aa21.81■■□□□ 1.08
VTI1A-203ENST00000472892 DEFB132Q7Z7B7 95 aa21.81■■□□□ 1.08
VTI1A-203ENST00000472892 ZNF692Q9BU19 519 aaPredicted RBP21.81■■□□□ 1.08
VTI1A-203ENST00000472892 NRKQ7Z2Y5 1582 aa21.81■■□□□ 1.08
VTI1A-203ENST00000472892 NLRP6P59044 892 aa21.8■■□□□ 1.08
VTI1A-203ENST00000472892 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
VTI1A-203ENST00000472892 CAMTA1Q9Y6Y1 1673 aa21.79■■□□□ 1.08
VTI1A-203ENST00000472892 CARD11Q9BXL7 1154 aa21.79■■□□□ 1.08
VTI1A-203ENST00000472892 THSD7AQ9UPZ6 1657 aa21.79■■□□□ 1.08
VTI1A-203ENST00000472892 TONSLQ96HA7 1378 aa21.78■■□□□ 1.08
VTI1A-203ENST00000472892 BARGINQ6ZT62 677 aa21.78■■□□□ 1.08
VTI1A-203ENST00000472892 SBNO2Q9Y2G9 1366 aa21.77■■□□□ 1.08
VTI1A-203ENST00000472892 LARP1Q6PKG0 1096 aaKnown RBP21.77■■□□□ 1.08
VTI1A-203ENST00000472892 FAM182BQ5T319 152 aa21.76■■□□□ 1.07
VTI1A-203ENST00000472892 USP35Q9P2H5 1018 aa21.76■■□□□ 1.07
VTI1A-203ENST00000472892 TTC21BQ7Z4L5 1316 aa21.76■■□□□ 1.07
VTI1A-203ENST00000472892 LMO7Q8WWI1 1683 aa21.75■■□□□ 1.07
VTI1A-203ENST00000472892 CPSF1Q10570 1443 aaKnown RBP21.74■■□□□ 1.07
VTI1A-203ENST00000472892 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
VTI1A-203ENST00000472892 SLIT3O75094 1523 aa21.74■■□□□ 1.07
VTI1A-203ENST00000472892 BAG6P46379 1132 aa21.73■■□□□ 1.07
VTI1A-203ENST00000472892 AATKQ6ZMQ8 1374 aa21.73■■□□□ 1.07
VTI1A-203ENST00000472892 THRAP3Q9Y2W1 955 aaKnown RBP21.72■■□□□ 1.07
VTI1A-203ENST00000472892 TTC21AQ8NDW8 1320 aa21.72■■□□□ 1.07
VTI1A-203ENST00000472892 SRCAPQ6ZRS2 3230 aa21.71■■□□□ 1.07
VTI1A-203ENST00000472892 FAM196AQ6ZSG2 479 aa21.71■■□□□ 1.07
VTI1A-203ENST00000472892 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
VTI1A-203ENST00000472892 PIK3C2AO00443 1686 aa21.7■■□□□ 1.06
VTI1A-203ENST00000472892 KCNH5Q8NCM2 988 aa21.69■■□□□ 1.06
VTI1A-203ENST00000472892 KTN1Q86UP2 1357 aaKnown RBP21.69■■□□□ 1.06
VTI1A-203ENST00000472892 ZBTB7CA1YPR0 619 aa21.68■■□□□ 1.06
VTI1A-203ENST00000472892 PDE3BQ13370 1112 aa21.68■■□□□ 1.06
VTI1A-203ENST00000472892 ARHGEF25Q86VW2 580 aa21.68■■□□□ 1.06
VTI1A-203ENST00000472892 AKAP12Q02952 1782 aa21.68■■□□□ 1.06
VTI1A-203ENST00000472892 CRB1P82279 1406 aa21.67■■□□□ 1.06
VTI1A-203ENST00000472892 EN1Q05925 392 aaPredicted RBP21.67■■□□□ 1.06
VTI1A-203ENST00000472892 PUS7Q96PZ0 661 aaKnown RBP21.67■■□□□ 1.06
VTI1A-203ENST00000472892 AXIN2Q9Y2T1 843 aa21.67■■□□□ 1.06
VTI1A-203ENST00000472892 DISP2A7MBM2 1401 aa21.65■■□□□ 1.06
VTI1A-203ENST00000472892 TRIM37O94972 964 aa21.65■■□□□ 1.06
VTI1A-203ENST00000472892 RGPD1P0DJD0 1748 aa21.64■■□□□ 1.06
VTI1A-203ENST00000472892 TMC1Q8TDI8 760 aa21.64■■□□□ 1.05
VTI1A-203ENST00000472892 SLC12A5Q9H2X9 1139 aa21.64■■□□□ 1.05
VTI1A-203ENST00000472892 CD163L1Q9NR16 1453 aa21.64■■□□□ 1.05
VTI1A-203ENST00000472892 COL18A1P39060 1754 aa21.64■■□□□ 1.05
VTI1A-203ENST00000472892 TESK2Q96S53 571 aa21.63■■□□□ 1.05
VTI1A-203ENST00000472892 USP31Q70CQ4 1352 aa21.62■■□□□ 1.05
VTI1A-203ENST00000472892 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms