RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 NBPF1Q3BBV0 1214 aa10.3□□□□□ -0.76
CCDC171-205ENST00000472806 KIF1BO60333 1816 aa10.3□□□□□ -0.76
CCDC171-205ENST00000472806 IQGAP1P46940 1657 aa10.29□□□□□ -0.76
CCDC171-205ENST00000472806 INSRP06213 1382 aa10.28□□□□□ -0.76
CCDC171-205ENST00000472806 ARHGAP33O14559 1287 aa10.28□□□□□ -0.76
CCDC171-205ENST00000472806 CCDC184Q52MB2 194 aa10.28□□□□□ -0.76
CCDC171-205ENST00000472806 ADGRD1Q6QNK2 874 aa10.28□□□□□ -0.76
CCDC171-205ENST00000472806 NLRP13Q86W25 1043 aa10.28□□□□□ -0.76
CCDC171-205ENST00000472806 TESK2Q96S53 571 aa10.28□□□□□ -0.76
CCDC171-205ENST00000472806 PARD3Q8TEW0 1356 aa10.27□□□□□ -0.76
CCDC171-205ENST00000472806 GLI2P10070 1586 aa10.27□□□□□ -0.76
CCDC171-205ENST00000472806 UPF1Q92900 1129 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC171-205ENST00000472806 RPGRIP1LQ68CZ1 1315 aa10.27□□□□□ -0.77
CCDC171-205ENST00000472806 ZMYM4Q5VZL5 1548 aa10.27□□□□□ -0.77
CCDC171-205ENST00000472806 MAP3K4Q9Y6R4 1608 aa10.26□□□□□ -0.77
CCDC171-205ENST00000472806 PPRC1Q5VV67 1664 aaKnown RBP10.26□□□□□ -0.77
CCDC171-205ENST00000472806 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
CCDC171-205ENST00000472806 SMG6Q86US8 1419 aaKnown RBP10.25□□□□□ -0.77
CCDC171-205ENST00000472806 SYNMO15061 1565 aa10.25□□□□□ -0.77
CCDC171-205ENST00000472806 LRPPRCP42704 1394 aaKnown RBP10.25□□□□□ -0.77
CCDC171-205ENST00000472806 DISP3Q9P2K9 1392 aa10.25□□□□□ -0.77
CCDC171-205ENST00000472806 ZC3H13Q5T200 1668 aaKnown RBP10.25□□□□□ -0.77
CCDC171-205ENST00000472806 ADGRB3O60242 1522 aa10.24□□□□□ -0.77
CCDC171-205ENST00000472806 IFT172Q9UG01 1749 aa10.24□□□□□ -0.77
CCDC171-205ENST00000472806 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 FRMPD1Q5SYB0 1578 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 SETBP1Q9Y6X0 1596 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 ABCA6Q8N139 1617 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 DNAJC5Q9H3Z4 198 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 NUDCQ9Y266 331 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 ABCC3O15438 1527 aa10.23□□□□□ -0.77
CCDC171-205ENST00000472806 PER1O15534 1290 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-205ENST00000472806 HRO43593 1189 aa10.22□□□□□ -0.77
CCDC171-205ENST00000472806 PDE3BQ13370 1112 aa10.22□□□□□ -0.77
CCDC171-205ENST00000472806 OXER1Q8TDS5 423 aa10.22□□□□□ -0.77
CCDC171-205ENST00000472806 BCANQ96GW7 911 aa10.22□□□□□ -0.77
CCDC171-205ENST00000472806 PANK3Q9H999 370 aa10.22□□□□□ -0.77
CCDC171-205ENST00000472806 KNSTRNQ9Y448 316 aa10.22□□□□□ -0.77
CCDC171-205ENST00000472806 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
CCDC171-205ENST00000472806 GGT6Q6P531 493 aa10.21□□□□□ -0.77
CCDC171-205ENST00000472806 PPP4R2Q9NY27 417 aa10.21□□□□□ -0.77
CCDC171-205ENST00000472806 NPC1L1Q9UHC9 1359 aa10.21□□□□□ -0.78
CCDC171-205ENST00000472806 SBNO2Q9Y2G9 1366 aa10.21□□□□□ -0.78
CCDC171-205ENST00000472806 NPATQ14207 1427 aa10.21□□□□□ -0.78
CCDC171-205ENST00000472806 DIP2CQ9Y2E4 1556 aa10.21□□□□□ -0.78
CCDC171-205ENST00000472806 CAMSAP1Q5T5Y3 1602 aa10.21□□□□□ -0.78
CCDC171-205ENST00000472806 KDM5AP29375 1690 aaKnown RBP10.21□□□□□ -0.78
CCDC171-205ENST00000472806 CNGB1Q14028 1251 aaPredicted RBP10.2□□□□□ -0.78
CCDC171-205ENST00000472806 RICTORQ6R327 1708 aa10.2□□□□□ -0.78
CCDC171-205ENST00000472806 MYO3AQ8NEV4 1616 aa10.2□□□□□ -0.78
CCDC171-205ENST00000472806 KCNK17Q96T54 332 aa10.2□□□□□ -0.78
CCDC171-205ENST00000472806 PSDA5PKW4 1024 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-205ENST00000472806 MROH2AA6NES4 1674 aa10.18□□□□□ -0.78
CCDC171-205ENST00000472806 UGGT1Q9NYU2 1555 aa10.18□□□□□ -0.78
CCDC171-205ENST00000472806 ASXL1Q8IXJ9 1541 aa10.18□□□□□ -0.78
CCDC171-205ENST00000472806 NOS1P29475 1434 aa10.18□□□□□ -0.78
CCDC171-205ENST00000472806 GTPBP6O43824 516 aaPredicted RBP10.18□□□□□ -0.78
CCDC171-205ENST00000472806 PPP4R3BQ5MIZ7 849 aa10.18□□□□□ -0.78
CCDC171-205ENST00000472806 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
CCDC171-205ENST00000472806 PPLO60437 1756 aa10.18□□□□□ -0.78
CCDC171-205ENST00000472806 ADGRF5Q8IZF2 1346 aa10.17□□□□□ -0.78
CCDC171-205ENST00000472806 TBC1D12O60347 775 aa10.17□□□□□ -0.78
CCDC171-205ENST00000472806 SLC52A1Q9NWF4 448 aa10.17□□□□□ -0.78
CCDC171-205ENST00000472806 PIK3C2GO75747 1445 aa10.16□□□□□ -0.78
CCDC171-205ENST00000472806 PIK3C2BO00750 1634 aa10.16□□□□□ -0.78
CCDC171-205ENST00000472806 CC2D1BQ5T0F9 858 aaKnown RBP10.16□□□□□ -0.78
CCDC171-205ENST00000472806 CFAP70Q5T0N1 1121 aa10.16□□□□□ -0.78
CCDC171-205ENST00000472806 PUS7Q96PZ0 661 aaKnown RBP10.16□□□□□ -0.78
CCDC171-205ENST00000472806 C14orf93Q9H972 538 aaKnown RBP10.16□□□□□ -0.78
CCDC171-205ENST00000472806 TSHZ2Q9NRE2 1034 aa10.16□□□□□ -0.78
CCDC171-205ENST00000472806 REREQ9P2R6 1566 aa10.16□□□□□ -0.78
CCDC171-205ENST00000472806 BLMP54132 1417 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-205ENST00000472806 RIMBP3CA6NJZ7 1639 aa10.15□□□□□ -0.78
CCDC171-205ENST00000472806 RIMBP3BA6NNM3 1639 aa10.15□□□□□ -0.78
CCDC171-205ENST00000472806 RIMBP3Q9UFD9 1639 aa10.15□□□□□ -0.78
CCDC171-205ENST00000472806 CENPJQ9HC77 1338 aaPredicted RBP10.15□□□□□ -0.78
CCDC171-205ENST00000472806 TK2O00142 265 aa10.15□□□□□ -0.78
CCDC171-205ENST00000472806 RAPGEF3O95398 923 aa10.15□□□□□ -0.78
CCDC171-205ENST00000472806 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
CCDC171-205ENST00000472806 ZFYVE9O95405 1425 aa10.15□□□□□ -0.79
CCDC171-205ENST00000472806 DIP2BQ9P265 1576 aa10.14□□□□□ -0.79
CCDC171-205ENST00000472806 RNF123Q5XPI4 1314 aa10.14□□□□□ -0.79
CCDC171-205ENST00000472806 WDR43Q15061 677 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC171-205ENST00000472806 CYB5RLQ6IPT4 315 aa10.14□□□□□ -0.79
CCDC171-205ENST00000472806 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
CCDC171-205ENST00000472806 PLA2G2EQ9NZK7 142 aa10.14□□□□□ -0.79
CCDC171-205ENST00000472806 HCSTQ9UBK5 93 aa10.14□□□□□ -0.79
CCDC171-205ENST00000472806 ERVK-7P63135 1459 aa10.14□□□□□ -0.79
CCDC171-205ENST00000472806 MYOM1P52179 1685 aa10.13□□□□□ -0.79
CCDC171-205ENST00000472806 VPS9D1Q9Y2B5 631 aa10.13□□□□□ -0.79
CCDC171-205ENST00000472806 AGLP35573 1532 aa10.12□□□□□ -0.79
CCDC171-205ENST00000472806 PPP2R1AP30153 589 aa10.12□□□□□ -0.79
CCDC171-205ENST00000472806 FAM69CQ0P6D2 419 aa10.12□□□□□ -0.79
CCDC171-205ENST00000472806 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
CCDC171-205ENST00000472806 NGEFQ8N5V2 710 aa10.12□□□□□ -0.79
CCDC171-205ENST00000472806 ADGRB1O14514 1584 aa10.11□□□□□ -0.79
CCDC171-205ENST00000472806 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
CCDC171-205ENST00000472806 NEXMIFQ5QGS0 1516 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms