RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 PRR20CP86479 221 aa8.55□□□□□ -1.04
COMMD3-211ENST00000472673 PRR20DP86480 221 aa8.55□□□□□ -1.04
COMMD3-211ENST00000472673 PRR20BP86481 221 aa8.55□□□□□ -1.04
COMMD3-211ENST00000472673 PRR20AP86496 221 aa8.55□□□□□ -1.04
COMMD3-211ENST00000472673 LRRN4Q8WUT4 740 aa8.54□□□□□ -1.04
COMMD3-211ENST00000472673 BAP1Q92560 729 aa8.54□□□□□ -1.04
COMMD3-211ENST00000472673 WNT7AO00755 349 aa8.53□□□□□ -1.04
COMMD3-211ENST00000472673 SH3BP2P78314 561 aa8.53□□□□□ -1.04
COMMD3-211ENST00000472673 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
COMMD3-211ENST00000472673 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
COMMD3-211ENST00000472673 USP17L8P0C7I0 530 aa8.51□□□□□ -1.05
COMMD3-211ENST00000472673 ZNF511Q8NB15 262 aa8.51□□□□□ -1.05
COMMD3-211ENST00000472673 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
COMMD3-211ENST00000472673 TMEM259Q4ZIN3 620 aa8.5□□□□□ -1.05
COMMD3-211ENST00000472673 EHBP1Q8NDI1 1231 aa8.5□□□□□ -1.05
COMMD3-211ENST00000472673 TTC24A2A3L6 582 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-211ENST00000472673 NR6A1Q15406 480 aa8.49□□□□□ -1.05
COMMD3-211ENST00000472673 ARMC2Q8NEN0 867 aa8.49□□□□□ -1.05
COMMD3-211ENST00000472673 FAM187AA6NFU0 413 aa8.48□□□□□ -1.05
COMMD3-211ENST00000472673 TOR4AQ9NXH8 423 aa8.48□□□□□ -1.05
COMMD3-211ENST00000472673 AGERQ15109 404 aa8.47□□□□□ -1.05
COMMD3-211ENST00000472673 PKDCCQ504Y2 493 aa8.47□□□□□ -1.05
COMMD3-211ENST00000472673 SNIP1Q8TAD8 396 aaKnown RBP8.47□□□□□ -1.05
COMMD3-211ENST00000472673 FOXJ1Q92949 421 aa8.47□□□□□ -1.05
COMMD3-211ENST00000472673 HMX1Q9NP08 348 aaPredicted RBP8.47□□□□□ -1.05
COMMD3-211ENST00000472673 NBPF14Q5TI25 921 aa8.46□□□□□ -1.06
COMMD3-211ENST00000472673 DGAT1O75907 488 aa8.45□□□□□ -1.06
COMMD3-211ENST00000472673 EPS8L1Q8TE68 723 aa8.45□□□□□ -1.06
COMMD3-211ENST00000472673 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
COMMD3-211ENST00000472673 J3QL48 77 aa8.44□□□□□ -1.06
COMMD3-211ENST00000472673 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
COMMD3-211ENST00000472673 SIAH2O43255 324 aa8.43□□□□□ -1.06
COMMD3-211ENST00000472673 ALDH1A1P00352 501 aa8.43□□□□□ -1.06
COMMD3-211ENST00000472673 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-211ENST00000472673 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
COMMD3-211ENST00000472673 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
COMMD3-211ENST00000472673 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.06
COMMD3-211ENST00000472673 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
COMMD3-211ENST00000472673 SMPD1P17405 629 aa8.42□□□□□ -1.06
COMMD3-211ENST00000472673 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
COMMD3-211ENST00000472673 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
COMMD3-211ENST00000472673 PNMA1Q8ND90 353 aa8.42□□□□□ -1.06
COMMD3-211ENST00000472673 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
COMMD3-211ENST00000472673 SH3BP5LQ7L8J4 393 aa8.41□□□□□ -1.06
COMMD3-211ENST00000472673 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
COMMD3-211ENST00000472673 TRIM34Q9BYJ4 488 aa8.41□□□□□ -1.06
COMMD3-211ENST00000472673 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
COMMD3-211ENST00000472673 MYT1Q01538 1121 aa8.4□□□□□ -1.06
COMMD3-211ENST00000472673 PDXDC2PQ6P474 469 aa8.4□□□□□ -1.06
COMMD3-211ENST00000472673 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
COMMD3-211ENST00000472673 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
COMMD3-211ENST00000472673 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
COMMD3-211ENST00000472673 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
COMMD3-211ENST00000472673 GJD4Q96KN9 370 aaPredicted RBP8.39□□□□□ -1.07
COMMD3-211ENST00000472673 ARHGAP9Q9BRR9 750 aa8.39□□□□□ -1.07
COMMD3-211ENST00000472673 MTMR14Q8NCE2 650 aa8.38□□□□□ -1.07
COMMD3-211ENST00000472673 PTK2Q05397 1052 aa8.37□□□□□ -1.07
COMMD3-211ENST00000472673 TMEM132AQ24JP5 1023 aa8.37□□□□□ -1.07
COMMD3-211ENST00000472673 ZBTB33Q86T24 672 aa8.37□□□□□ -1.07
COMMD3-211ENST00000472673 HPS1Q92902 700 aa8.37□□□□□ -1.07
COMMD3-211ENST00000472673 C1QTNF2Q9BXJ5 285 aa8.37□□□□□ -1.07
COMMD3-211ENST00000472673 ST8SIA5O15466 376 aa8.36□□□□□ -1.07
COMMD3-211ENST00000472673 AVPP01185 164 aa8.36□□□□□ -1.07
COMMD3-211ENST00000472673 ERFEQ4G0M1 354 aa8.36□□□□□ -1.07
COMMD3-211ENST00000472673 MPNDQ8N594 471 aa8.36□□□□□ -1.07
COMMD3-211ENST00000472673 ZNF775Q96BV0 537 aaPredicted RBP8.36□□□□□ -1.07
COMMD3-211ENST00000472673 APBB1O00213 710 aa8.35□□□□□ -1.07
COMMD3-211ENST00000472673 CDK15Q96Q40 435 aa8.35□□□□□ -1.07
COMMD3-211ENST00000472673 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
COMMD3-211ENST00000472673 SOCS7O14512 581 aa8.34□□□□□ -1.07
COMMD3-211ENST00000472673 AXIN1O15169 862 aa8.34□□□□□ -1.07
COMMD3-211ENST00000472673 ADH1CP00326 375 aa8.34□□□□□ -1.07
COMMD3-211ENST00000472673 TRMT44Q8IYL2 757 aaKnown RBP8.34□□□□□ -1.07
COMMD3-211ENST00000472673 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
COMMD3-211ENST00000472673 AAASQ9NRG9 546 aa8.34□□□□□ -1.07
COMMD3-211ENST00000472673 NDUFB9Q9Y6M9 179 aa8.34□□□□□ -1.07
COMMD3-211ENST00000472673 NNTQ13423 1086 aa8.33□□□□□ -1.08
COMMD3-211ENST00000472673 CTC1Q2NKJ3 1217 aa8.33□□□□□ -1.08
COMMD3-211ENST00000472673 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-211ENST00000472673 ADAM32Q8TC27 787 aa8.33□□□□□ -1.08
COMMD3-211ENST00000472673 SLC10A4Q96EP9 437 aa8.33□□□□□ -1.08
COMMD3-211ENST00000472673 CRIPAKQ8N1N5 446 aa8.32□□□□□ -1.08
COMMD3-211ENST00000472673 FSHRP23945 695 aa8.31□□□□□ -1.08
COMMD3-211ENST00000472673 GRM5P41594 1212 aa8.31□□□□□ -1.08
COMMD3-211ENST00000472673 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-211ENST00000472673 MAP4K5Q9Y4K4 846 aa8.31□□□□□ -1.08
COMMD3-211ENST00000472673 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
COMMD3-211ENST00000472673 NR5A1Q13285 461 aa8.3□□□□□ -1.08
COMMD3-211ENST00000472673 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
COMMD3-211ENST00000472673 GPR37L1O60883 481 aa8.29□□□□□ -1.08
COMMD3-211ENST00000472673 FBXO45P0C2W1 286 aa8.29□□□□□ -1.08
COMMD3-211ENST00000472673 MCM6Q14566 821 aa8.29□□□□□ -1.08
COMMD3-211ENST00000472673 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
COMMD3-211ENST00000472673 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
COMMD3-211ENST00000472673 CAPN5O15484 640 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-211ENST00000472673 NR3C2P08235 984 aa8.28□□□□□ -1.08
COMMD3-211ENST00000472673 WDR4P57081 412 aaKnown RBP8.28□□□□□ -1.08
COMMD3-211ENST00000472673 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
COMMD3-211ENST00000472673 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-211ENST00000472673 CDV3Q9UKY7 258 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms