RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 PPIP5K1Q6PFW1 1433 aa28.28■■■□□ 2.12
UBQLN4-203ENST00000472638 POLR3AO14802 1390 aaPredicted RBP28.28■■■□□ 2.12
UBQLN4-203ENST00000472638 ABCA3Q99758 1704 aa28.27■■■□□ 2.12
UBQLN4-203ENST00000472638 EVC2Q86UK5 1308 aa28.26■■■□□ 2.11
UBQLN4-203ENST00000472638 NUTM2GQ5VZR2 741 aa28.26■■■□□ 2.11
UBQLN4-203ENST00000472638 UNC5CLQ8IV45 518 aa28.26■■■□□ 2.11
UBQLN4-203ENST00000472638 SLIT2O94813 1529 aa28.26■■■□□ 2.11
UBQLN4-203ENST00000472638 FAM83GA6ND36 823 aa28.24■■■□□ 2.11
UBQLN4-203ENST00000472638 CABP1Q9NZU7 370 aa28.24■■■□□ 2.11
UBQLN4-203ENST00000472638 RALGAPBQ86X10 1494 aa28.22■■■□□ 2.11
UBQLN4-203ENST00000472638 GJD4Q96KN9 370 aaPredicted RBP28.22■■■□□ 2.11
UBQLN4-203ENST00000472638 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.1
UBQLN4-203ENST00000472638 CLSPNQ9HAW4 1339 aa28.18■■■□□ 2.1
UBQLN4-203ENST00000472638 PLCH1Q4KWH8 1693 aa28.17■■■□□ 2.1
UBQLN4-203ENST00000472638 ABTB2Q8N961 1025 aa28.17■■■□□ 2.1
UBQLN4-203ENST00000472638 CCDC9Q9Y3X0 531 aaKnown RBP28.17■■■□□ 2.1
UBQLN4-203ENST00000472638 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.16■■■□□ 2.1
UBQLN4-203ENST00000472638 CCER1Q8TC90 406 aaPredicted RBP28.16■■■□□ 2.1
UBQLN4-203ENST00000472638 BTG4Q9NY30 223 aa28.15■■■□□ 2.1
UBQLN4-203ENST00000472638 CRYBG1Q9Y4K1 1723 aa28.15■■■□□ 2.1
UBQLN4-203ENST00000472638 PRDM11Q9NQV5 511 aa28.14■■■□□ 2.1
UBQLN4-203ENST00000472638 VPS72Q15906 364 aa28.13■■■□□ 2.09
UBQLN4-203ENST00000472638 ZC3H6P61129 1189 aaKnown RBP28.12■■■□□ 2.09
UBQLN4-203ENST00000472638 GLI3P10071 1580 aa28.11■■■□□ 2.09
UBQLN4-203ENST00000472638 CHRNA2Q15822 529 aa28.11■■■□□ 2.09
UBQLN4-203ENST00000472638 KIAA0232Q92628 1395 aa28.11■■■□□ 2.09
UBQLN4-203ENST00000472638 USP6P35125 1406 aa28.1■■■□□ 2.09
UBQLN4-203ENST00000472638 NWD2Q9ULI1 1742 aa28.1■■■□□ 2.09
UBQLN4-203ENST00000472638 PHRF1Q9P1Y6 1649 aaKnown RBP28.09■■■□□ 2.09
UBQLN4-203ENST00000472638 SBNO2Q9Y2G9 1366 aa28.09■■■□□ 2.09
UBQLN4-203ENST00000472638 COL14A1Q05707 1796 aaKnown RBP28.09■■■□□ 2.09
UBQLN4-203ENST00000472638 ATAD2Q6PL18 1390 aa28.08■■■□□ 2.09
UBQLN4-203ENST00000472638 NLRP13Q86W25 1043 aa28.07■■■□□ 2.08
UBQLN4-203ENST00000472638 BRD4O60885 1362 aaPredicted RBP28.05■■■□□ 2.08
UBQLN4-203ENST00000472638 USP19O94966 1318 aa28.05■■■□□ 2.08
UBQLN4-203ENST00000472638 NRAPQ86VF7 1730 aa28.04■■■□□ 2.08
UBQLN4-203ENST00000472638 NLRP6P59044 892 aa28.04■■■□□ 2.08
UBQLN4-203ENST00000472638 ST20-MTHFSA0A0A6YYL1 179 aa28.03■■■□□ 2.08
UBQLN4-203ENST00000472638 SEPT12Q8IYM1 358 aa28.03■■■□□ 2.08
UBQLN4-203ENST00000472638 ZNF692Q9BU19 519 aaPredicted RBP28.03■■■□□ 2.08
UBQLN4-203ENST00000472638 SSH2Q76I76 1423 aa28.02■■■□□ 2.08
UBQLN4-203ENST00000472638 GCP02774 474 aa28.02■■■□□ 2.08
UBQLN4-203ENST00000472638 TMC1Q8TDI8 760 aa28.02■■■□□ 2.08
UBQLN4-203ENST00000472638 NRKQ7Z2Y5 1582 aa28.02■■■□□ 2.08
UBQLN4-203ENST00000472638 A0A0G2JS52 829 aa28.01■■■□□ 2.07
UBQLN4-203ENST00000472638 MYT1Q01538 1121 aa28.01■■■□□ 2.07
UBQLN4-203ENST00000472638 STRN4Q9NRL3 753 aa28.01■■■□□ 2.07
UBQLN4-203ENST00000472638 TTC21BQ7Z4L5 1316 aa28■■■□□ 2.07
UBQLN4-203ENST00000472638 ZBTB7CA1YPR0 619 aa28■■■□□ 2.07
UBQLN4-203ENST00000472638 KTN1Q86UP2 1357 aaKnown RBP27.99■■■□□ 2.07
UBQLN4-203ENST00000472638 FAM98CQ17RN3 349 aaKnown RBP27.99■■■□□ 2.07
UBQLN4-203ENST00000472638 TESK2Q96S53 571 aa27.99■■■□□ 2.07
UBQLN4-203ENST00000472638 CPSF1Q10570 1443 aaKnown RBP27.99■■■□□ 2.07
UBQLN4-203ENST00000472638 SPATA31A5Q5VU36 1347 aa27.97■■■□□ 2.07
UBQLN4-203ENST00000472638 SPATA31A7Q8IWB4 1347 aa27.97■■■□□ 2.07
UBQLN4-203ENST00000472638 ONECUT3O60422 494 aaPredicted RBP27.97■■■□□ 2.07
UBQLN4-203ENST00000472638 SLC12A5Q9H2X9 1139 aa27.97■■■□□ 2.07
UBQLN4-203ENST00000472638 CPDO75976 1380 aa27.96■■■□□ 2.07
UBQLN4-203ENST00000472638 AKAP12Q02952 1782 aa27.96■■■□□ 2.07
UBQLN4-203ENST00000472638 PIK3C2AO00443 1686 aa27.95■■■□□ 2.07
UBQLN4-203ENST00000472638 EVA1CP58658 441 aa27.95■■■□□ 2.06
UBQLN4-203ENST00000472638 TIMELESSQ9UNS1 1208 aa27.95■■■□□ 2.06
UBQLN4-203ENST00000472638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.94■■■□□ 2.06
UBQLN4-203ENST00000472638 USP47Q96K76 1375 aa27.94■■■□□ 2.06
UBQLN4-203ENST00000472638 TTC21AQ8NDW8 1320 aa27.93■■■□□ 2.06
UBQLN4-203ENST00000472638 SOX12O15370 315 aa27.93■■■□□ 2.06
UBQLN4-203ENST00000472638 CD163L1Q9NR16 1453 aa27.92■■■□□ 2.06
UBQLN4-203ENST00000472638 HDGFL2Q7Z4V5 671 aaPredicted RBP27.92■■■□□ 2.06
UBQLN4-203ENST00000472638 CAMTA1Q9Y6Y1 1673 aa27.91■■■□□ 2.06
UBQLN4-203ENST00000472638 BRWD3Q6RI45 1802 aa27.91■■■□□ 2.06
UBQLN4-203ENST00000472638 USP35Q9P2H5 1018 aa27.91■■■□□ 2.06
UBQLN4-203ENST00000472638 SLIT3O75094 1523 aa27.91■■■□□ 2.06
UBQLN4-203ENST00000472638 SPATA31A1Q5TZJ5 1347 aa27.91■■■□□ 2.06
UBQLN4-203ENST00000472638 KRT27Q7Z3Y8 459 aa27.9■■■□□ 2.06
UBQLN4-203ENST00000472638 PUS7Q96PZ0 661 aaKnown RBP27.9■■■□□ 2.06
UBQLN4-203ENST00000472638 ZRANB1Q9UGI0 708 aa27.9■■■□□ 2.06
UBQLN4-203ENST00000472638 LARP1Q6PKG0 1096 aaKnown RBP27.89■■■□□ 2.06
UBQLN4-203ENST00000472638 MON2Q7Z3U7 1717 aa27.87■■■□□ 2.05
UBQLN4-203ENST00000472638 NME9Q86XW9 330 aa27.87■■■□□ 2.05
UBQLN4-203ENST00000472638 TERF2IPQ9NYB0 399 aa27.87■■■□□ 2.05
UBQLN4-203ENST00000472638 LMO7Q8WWI1 1683 aa27.87■■■□□ 2.05
UBQLN4-203ENST00000472638 A0A1W2PP64 1363 aa27.86■■■□□ 2.05
UBQLN4-203ENST00000472638 SLC24A1O60721 1099 aa27.85■■■□□ 2.05
UBQLN4-203ENST00000472638 TMF1P82094 1093 aa27.84■■■□□ 2.05
UBQLN4-203ENST00000472638 KCNH5Q8NCM2 988 aa27.84■■■□□ 2.05
UBQLN4-203ENST00000472638 AATKQ6ZMQ8 1374 aa27.84■■■□□ 2.05
UBQLN4-203ENST00000472638 FAM182BQ5T319 152 aa27.82■■■□□ 2.04
UBQLN4-203ENST00000472638 COL5A2P05997 1499 aaPredicted RBP27.82■■■□□ 2.04
UBQLN4-203ENST00000472638 EP400Q96L91 3159 aa27.81■■■□□ 2.04
UBQLN4-203ENST00000472638 ARHGEF25Q86VW2 580 aa27.81■■■□□ 2.04
UBQLN4-203ENST00000472638 CCDC125Q86Z20 511 aa27.81■■■□□ 2.04
UBQLN4-203ENST00000472638 EDC4Q6P2E9 1401 aaKnown RBP27.81■■■□□ 2.04
UBQLN4-203ENST00000472638 AXIN2Q9Y2T1 843 aa27.8■■■□□ 2.04
UBQLN4-203ENST00000472638 THSD7AQ9UPZ6 1657 aa27.8■■■□□ 2.04
UBQLN4-203ENST00000472638 USP31Q70CQ4 1352 aa27.79■■■□□ 2.04
UBQLN4-203ENST00000472638 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
UBQLN4-203ENST00000472638 ZEB1P37275 1124 aaPredicted RBP27.78■■■□□ 2.04
UBQLN4-203ENST00000472638 TCP11L2Q8N4U5 519 aa27.78■■■□□ 2.04
UBQLN4-203ENST00000472638 BLMP54132 1417 aaPredicted RBP27.77■■■□□ 2.04
UBQLN4-203ENST00000472638 NFAT5O94916 1531 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms