RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 CDK19Q9BWU1 502 aa24.3■■□□□ 1.48
PKD1-208ENST00000472577 ZRANB1Q9UGI0 708 aa24.3■■□□□ 1.48
PKD1-208ENST00000472577 BLMP54132 1417 aaPredicted RBP24.29■■□□□ 1.48
PKD1-208ENST00000472577 HAP1P54257 671 aaPredicted RBP24.29■■□□□ 1.48
PKD1-208ENST00000472577 CCDC125Q86Z20 511 aa24.29■■□□□ 1.48
PKD1-208ENST00000472577 NRAPQ86VF7 1730 aa24.29■■□□□ 1.48
PKD1-208ENST00000472577 SBNO2Q9Y2G9 1366 aa24.29■■□□□ 1.48
PKD1-208ENST00000472577 ST20-MTHFSA0A0A6YYL1 179 aa24.28■■□□□ 1.48
PKD1-208ENST00000472577 PMFBP1Q8TBY8 1022 aa24.28■■□□□ 1.48
PKD1-208ENST00000472577 ARHGEF10O15013 1369 aa24.28■■□□□ 1.48
PKD1-208ENST00000472577 ALS2Q96Q42 1657 aa24.27■■□□□ 1.48
PKD1-208ENST00000472577 ATP7BP35670 1465 aa24.27■■□□□ 1.48
PKD1-208ENST00000472577 PSME1Q06323 249 aa24.27■■□□□ 1.48
PKD1-208ENST00000472577 LMOD2Q6P5Q4 547 aa24.27■■□□□ 1.48
PKD1-208ENST00000472577 VPS72Q15906 364 aa24.26■■□□□ 1.47
PKD1-208ENST00000472577 SEPT12Q8IYM1 358 aa24.26■■□□□ 1.47
PKD1-208ENST00000472577 DEFB132Q7Z7B7 95 aa24.24■■□□□ 1.47
PKD1-208ENST00000472577 NUDT16Q96DE0 195 aaKnown RBP24.24■■□□□ 1.47
PKD1-208ENST00000472577 TESK2Q96S53 571 aa24.24■■□□□ 1.47
PKD1-208ENST00000472577 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
PKD1-208ENST00000472577 EVC2Q86UK5 1308 aa24.24■■□□□ 1.47
PKD1-208ENST00000472577 CRYBG1Q9Y4K1 1723 aa24.24■■□□□ 1.47
PKD1-208ENST00000472577 SRPK2P78362 688 aaKnown RBP24.23■■□□□ 1.47
PKD1-208ENST00000472577 TOPAZ1Q8N9V7 1692 aa24.22■■□□□ 1.47
PKD1-208ENST00000472577 ITSN1Q15811 1721 aa24.21■■□□□ 1.47
PKD1-208ENST00000472577 FAM83GA6ND36 823 aa24.21■■□□□ 1.47
PKD1-208ENST00000472577 CCDC9Q9Y3X0 531 aaKnown RBP24.21■■□□□ 1.47
PKD1-208ENST00000472577 ONECUT3O60422 494 aaPredicted RBP24.19■■□□□ 1.46
PKD1-208ENST00000472577 COL14A1Q05707 1796 aaKnown RBP24.19■■□□□ 1.46
PKD1-208ENST00000472577 CCDC61Q9Y6R9 512 aa24.17■■□□□ 1.46
PKD1-208ENST00000472577 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
PKD1-208ENST00000472577 KRT27Q7Z3Y8 459 aa24.16■■□□□ 1.46
PKD1-208ENST00000472577 HSPA5P11021 654 aaKnown RBP24.15■■□□□ 1.46
PKD1-208ENST00000472577 PPIP5K1Q6PFW1 1433 aa24.15■■□□□ 1.46
PKD1-208ENST00000472577 BTG4Q9NY30 223 aa24.14■■□□□ 1.45
PKD1-208ENST00000472577 FAM98CQ17RN3 349 aaKnown RBP24.13■■□□□ 1.45
PKD1-208ENST00000472577 A0A0G2JS52 829 aa24.12■■□□□ 1.45
PKD1-208ENST00000472577 PLEKHG3A1L390 1219 aa24.12■■□□□ 1.45
PKD1-208ENST00000472577 MYT1Q01538 1121 aa24.12■■□□□ 1.45
PKD1-208ENST00000472577 THSD7AQ9UPZ6 1657 aa24.11■■□□□ 1.45
PKD1-208ENST00000472577 SLC24A1O60721 1099 aa24.11■■□□□ 1.45
PKD1-208ENST00000472577 SF3B2Q13435 895 aaKnown RBP24.11■■□□□ 1.45
PKD1-208ENST00000472577 NGDNQ8NEJ9 315 aaKnown RBP24.11■■□□□ 1.45
PKD1-208ENST00000472577 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
PKD1-208ENST00000472577 TMF1P82094 1093 aa24.1■■□□□ 1.45
PKD1-208ENST00000472577 CABP1Q9NZU7 370 aa24.1■■□□□ 1.45
PKD1-208ENST00000472577 POLR3AO14802 1390 aaPredicted RBP24.1■■□□□ 1.45
PKD1-208ENST00000472577 LRP5O75197 1615 aa24.1■■□□□ 1.45
PKD1-208ENST00000472577 ACEP12821 1306 aa24.1■■□□□ 1.45
PKD1-208ENST00000472577 PUS7Q96PZ0 661 aaKnown RBP24.08■■□□□ 1.45
PKD1-208ENST00000472577 RGPD1P0DJD0 1748 aa24.07■■□□□ 1.44
PKD1-208ENST00000472577 FAM182BQ5T319 152 aa24.06■■□□□ 1.44
PKD1-208ENST00000472577 TNS1Q9HBL0 1735 aaKnown RBP24.06■■□□□ 1.44
PKD1-208ENST00000472577 SPATA31A5Q5VU36 1347 aa24.06■■□□□ 1.44
PKD1-208ENST00000472577 SPATA31A7Q8IWB4 1347 aa24.06■■□□□ 1.44
PKD1-208ENST00000472577 PAK3O75914 559 aaPredicted RBP24.05■■□□□ 1.44
PKD1-208ENST00000472577 PRDM11Q9NQV5 511 aa24.03■■□□□ 1.44
PKD1-208ENST00000472577 KIAA0232Q92628 1395 aa24.03■■□□□ 1.44
PKD1-208ENST00000472577 PSDA5PKW4 1024 aaPredicted RBP24.02■■□□□ 1.44
PKD1-208ENST00000472577 AKAP12Q02952 1782 aa24.01■■□□□ 1.43
PKD1-208ENST00000472577 BAG6P46379 1132 aa24.01■■□□□ 1.43
PKD1-208ENST00000472577 TMC1Q8TDI8 760 aa24.01■■□□□ 1.43
PKD1-208ENST00000472577 SLC12A5Q9H2X9 1139 aa24.01■■□□□ 1.43
PKD1-208ENST00000472577 CD163L1Q9NR16 1453 aa24■■□□□ 1.43
PKD1-208ENST00000472577 CHRNA2Q15822 529 aa24■■□□□ 1.43
PKD1-208ENST00000472577 CDCA8Q53HL2 280 aa24■■□□□ 1.43
PKD1-208ENST00000472577 CPSF1Q10570 1443 aaKnown RBP24■■□□□ 1.43
PKD1-208ENST00000472577 NRKQ7Z2Y5 1582 aa23.99■■□□□ 1.43
PKD1-208ENST00000472577 USP6P35125 1406 aa23.99■■□□□ 1.43
PKD1-208ENST00000472577 EN1Q05925 392 aaPredicted RBP23.98■■□□□ 1.43
PKD1-208ENST00000472577 C11orf95C9JLR9 678 aaPredicted RBP23.97■■□□□ 1.43
PKD1-208ENST00000472577 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
PKD1-208ENST00000472577 SPATA31A1Q5TZJ5 1347 aa23.97■■□□□ 1.43
PKD1-208ENST00000472577 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
PKD1-208ENST00000472577 MYOM1P52179 1685 aa23.96■■□□□ 1.43
PKD1-208ENST00000472577 DISP2A7MBM2 1401 aa23.96■■□□□ 1.43
PKD1-208ENST00000472577 NINLQ9Y2I6 1382 aa23.96■■□□□ 1.43
PKD1-208ENST00000472577 MON2Q7Z3U7 1717 aa23.96■■□□□ 1.43
PKD1-208ENST00000472577 SSH2Q76I76 1423 aa23.95■■□□□ 1.42
PKD1-208ENST00000472577 ZNF692Q9BU19 519 aaPredicted RBP23.95■■□□□ 1.42
PKD1-208ENST00000472577 ZC3H6P61129 1189 aaKnown RBP23.94■■□□□ 1.42
PKD1-208ENST00000472577 STRN4Q9NRL3 753 aa23.94■■□□□ 1.42
PKD1-208ENST00000472577 LMO7Q8WWI1 1683 aa23.94■■□□□ 1.42
PKD1-208ENST00000472577 A0A1W2PP64 1363 aa23.93■■□□□ 1.42
PKD1-208ENST00000472577 BRD4O60885 1362 aaPredicted RBP23.93■■□□□ 1.42
PKD1-208ENST00000472577 KTN1Q86UP2 1357 aaKnown RBP23.93■■□□□ 1.42
PKD1-208ENST00000472577 HDGFL2Q7Z4V5 671 aaPredicted RBP23.92■■□□□ 1.42
PKD1-208ENST00000472577 POLR3GLQ9BT43 218 aa23.92■■□□□ 1.42
PKD1-208ENST00000472577 CAMTA1Q9Y6Y1 1673 aa23.92■■□□□ 1.42
PKD1-208ENST00000472577 TERF2IPQ9NYB0 399 aa23.91■■□□□ 1.42
PKD1-208ENST00000472577 TTC21BQ7Z4L5 1316 aa23.89■■□□□ 1.42
PKD1-208ENST00000472577 ANKRD36BQ8N2N9 1353 aa23.89■■□□□ 1.41
PKD1-208ENST00000472577 R3HDM1Q15032 1099 aaKnown RBP23.88■■□□□ 1.41
PKD1-208ENST00000472577 EZH2Q15910 746 aaKnown RBP23.88■■□□□ 1.41
PKD1-208ENST00000472577 USP35Q9P2H5 1018 aa23.88■■□□□ 1.41
PKD1-208ENST00000472577 PIK3C2AO00443 1686 aa23.88■■□□□ 1.41
PKD1-208ENST00000472577 USP19O94966 1318 aa23.87■■□□□ 1.41
PKD1-208ENST00000472577 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
PKD1-208ENST00000472577 TRIM37O94972 964 aa23.87■■□□□ 1.41
PKD1-208ENST00000472577 ABTB2Q8N961 1025 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms