RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ABCC3O15438 1527 aa7.25□□□□□ -1.25
LMNB1-205ENST00000472034 TBC1D12O60347 775 aa7.24□□□□□ -1.25
LMNB1-205ENST00000472034 KDM2AQ9Y2K7 1162 aa7.24□□□□□ -1.25
LMNB1-205ENST00000472034 EID1Q9Y6B2 187 aa7.24□□□□□ -1.25
LMNB1-205ENST00000472034 CAMTA1Q9Y6Y1 1673 aa7.24□□□□□ -1.25
LMNB1-205ENST00000472034 SETD5Q9C0A6 1442 aa7.24□□□□□ -1.25
LMNB1-205ENST00000472034 ZNF644Q9H582 1327 aaPredicted RBP7.24□□□□□ -1.25
LMNB1-205ENST00000472034 TMEM2Q9UHN6 1383 aa7.23□□□□□ -1.25
LMNB1-205ENST00000472034 GPATCH8Q9UKJ3 1502 aaKnown RBP7.23□□□□□ -1.25
LMNB1-205ENST00000472034 ZNF710Q8N1W2 664 aa7.23□□□□□ -1.25
LMNB1-205ENST00000472034 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.23□□□□□ -1.25
LMNB1-205ENST00000472034 ASXL1Q8IXJ9 1541 aa7.22□□□□□ -1.25
LMNB1-205ENST00000472034 KIAA1107Q9UPP5 1409 aa7.22□□□□□ -1.25
LMNB1-205ENST00000472034 C14orf37Q86TY3 774 aa7.22□□□□□ -1.25
LMNB1-205ENST00000472034 BRWD3Q6RI45 1802 aa7.22□□□□□ -1.25
LMNB1-205ENST00000472034 RTEL1-TNFRSF6BF6WH68 1400 aa7.21□□□□□ -1.25
LMNB1-205ENST00000472034 PIK3C2BO00750 1634 aa7.21□□□□□ -1.26
LMNB1-205ENST00000472034 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
LMNB1-205ENST00000472034 CAMSAP2Q08AD1 1489 aa7.2□□□□□ -1.26
LMNB1-205ENST00000472034 ZNF316A6NFI3 1004 aaPredicted RBP7.2□□□□□ -1.26
LMNB1-205ENST00000472034 SLC34A2O95436 690 aa7.2□□□□□ -1.26
LMNB1-205ENST00000472034 SF3B2Q13435 895 aaKnown RBP7.2□□□□□ -1.26
LMNB1-205ENST00000472034 ATF3P18847 181 aa7.19□□□□□ -1.26
LMNB1-205ENST00000472034 MAP3K9P80192 1104 aa7.19□□□□□ -1.26
LMNB1-205ENST00000472034 EN1Q05925 392 aaPredicted RBP7.19□□□□□ -1.26
LMNB1-205ENST00000472034 LRRC59Q96AG4 307 aaKnown RBP7.19□□□□□ -1.26
LMNB1-205ENST00000472034 CHD2O14647 1828 aaKnown RBP7.19□□□□□ -1.26
LMNB1-205ENST00000472034 FMN1Q68DA7 1419 aa7.18□□□□□ -1.26
LMNB1-205ENST00000472034 MBD5Q9P267 1494 aa7.18□□□□□ -1.26
LMNB1-205ENST00000472034 GLI3P10071 1580 aa7.18□□□□□ -1.26
LMNB1-205ENST00000472034 CAMK2BQ13554 666 aa7.18□□□□□ -1.26
LMNB1-205ENST00000472034 ARHGEF1Q92888 912 aaKnown RBP7.18□□□□□ -1.26
LMNB1-205ENST00000472034 BCANQ96GW7 911 aa7.18□□□□□ -1.26
LMNB1-205ENST00000472034 GJD4Q96KN9 370 aaPredicted RBP7.18□□□□□ -1.26
LMNB1-205ENST00000472034 ZSWIM6Q9HCJ5 1215 aa7.18□□□□□ -1.26
LMNB1-205ENST00000472034 CFDP1Q9UEE9 299 aaPredicted RBP7.18□□□□□ -1.26
LMNB1-205ENST00000472034 CEP152O94986 1710 aa7.18□□□□□ -1.26
LMNB1-205ENST00000472034 PLEKHH2Q8IVE3 1493 aa7.17□□□□□ -1.26
LMNB1-205ENST00000472034 UNC13BO14795 1591 aa7.17□□□□□ -1.26
LMNB1-205ENST00000472034 MROH1Q8NDA8 1641 aa7.17□□□□□ -1.26
LMNB1-205ENST00000472034 ERICH6Q7L0X2 663 aa7.17□□□□□ -1.26
LMNB1-205ENST00000472034 PTCD2Q8WV60 388 aaKnown RBP7.17□□□□□ -1.26
LMNB1-205ENST00000472034 C19orf44Q9H6X5 657 aa7.17□□□□□ -1.26
LMNB1-205ENST00000472034 ARHGAP35Q9NRY4 1499 aa7.17□□□□□ -1.26
LMNB1-205ENST00000472034 RALGAPBQ86X10 1494 aa7.16□□□□□ -1.26
LMNB1-205ENST00000472034 EFCAB6Q5THR3 1501 aa7.16□□□□□ -1.26
LMNB1-205ENST00000472034 BAG6P46379 1132 aa7.15□□□□□ -1.26
LMNB1-205ENST00000472034 KCNV2Q8TDN2 545 aa7.15□□□□□ -1.26
LMNB1-205ENST00000472034 MST1RQ04912 1400 aa7.15□□□□□ -1.27
LMNB1-205ENST00000472034 SPDYE16A6NNV3 312 aaPredicted RBP7.14□□□□□ -1.27
LMNB1-205ENST00000472034 NBR1Q14596 966 aa7.14□□□□□ -1.27
LMNB1-205ENST00000472034 SEPT12Q8IYM1 358 aa7.14□□□□□ -1.27
LMNB1-205ENST00000472034 OXER1Q8TDS5 423 aa7.14□□□□□ -1.27
LMNB1-205ENST00000472034 ARIH1Q9Y4X5 557 aaPredicted RBP7.14□□□□□ -1.27
LMNB1-205ENST00000472034 PCDHGA4Q9Y5G9 962 aa7.14□□□□□ -1.27
LMNB1-205ENST00000472034 NCOA3Q9Y6Q9 1424 aa7.14□□□□□ -1.27
LMNB1-205ENST00000472034 PTCH1Q13635 1447 aa7.13□□□□□ -1.27
LMNB1-205ENST00000472034 HOXB3P14651 431 aaPredicted RBP7.13□□□□□ -1.27
LMNB1-205ENST00000472034 IDI1Q13907 227 aa7.13□□□□□ -1.27
LMNB1-205ENST00000472034 EZH2Q15910 746 aaKnown RBP7.13□□□□□ -1.27
LMNB1-205ENST00000472034 EMILIN3Q9NT22 766 aa7.13□□□□□ -1.27
LMNB1-205ENST00000472034 PPP1R1BQ9UD71 204 aaPredicted RBP7.13□□□□□ -1.27
LMNB1-205ENST00000472034 CCNB3Q8WWL7 1395 aa7.12□□□□□ -1.27
LMNB1-205ENST00000472034 DPYSL4O14531 572 aa7.12□□□□□ -1.27
LMNB1-205ENST00000472034 FAM182BQ5T319 152 aa7.12□□□□□ -1.27
LMNB1-205ENST00000472034 FAM163AQ96GL9 167 aaPredicted RBP7.12□□□□□ -1.27
LMNB1-205ENST00000472034 SPHKAPQ2M3C7 1700 aa7.12□□□□□ -1.27
LMNB1-205ENST00000472034 NINLQ9Y2I6 1382 aa7.11□□□□□ -1.27
LMNB1-205ENST00000472034 TULP1O00294 542 aaPredicted RBP7.11□□□□□ -1.27
LMNB1-205ENST00000472034 GIGYF1O75420 1035 aaPredicted RBP7.11□□□□□ -1.27
LMNB1-205ENST00000472034 MYOM2P54296 1465 aa7.11□□□□□ -1.27
LMNB1-205ENST00000472034 CCDC18Q5T9S5 1454 aa7.11□□□□□ -1.27
LMNB1-205ENST00000472034 PTPRUQ92729 1446 aa7.1□□□□□ -1.27
LMNB1-205ENST00000472034 GOLGB1Q14789 3259 aaKnown RBP7.1□□□□□ -1.27
LMNB1-205ENST00000472034 EVI5O60447 810 aa7.1□□□□□ -1.27
LMNB1-205ENST00000472034 ARSIQ5FYB1 569 aa7.1□□□□□ -1.27
LMNB1-205ENST00000472034 KRT27Q7Z3Y8 459 aa7.1□□□□□ -1.27
LMNB1-205ENST00000472034 PLEKHG1Q9ULL1 1385 aa7.09□□□□□ -1.27
LMNB1-205ENST00000472034 HOXB1P14653 301 aaPredicted RBP7.09□□□□□ -1.27
LMNB1-205ENST00000472034 SMYD5Q6GMV2 418 aa7.09□□□□□ -1.27
LMNB1-205ENST00000472034 GPR153Q6NV75 609 aa7.09□□□□□ -1.27
LMNB1-205ENST00000472034 CCDC141Q6ZP82 1450 aa7.09□□□□□ -1.27
LMNB1-205ENST00000472034 ZFYVE9O95405 1425 aa7.09□□□□□ -1.28
LMNB1-205ENST00000472034 ADAMTS13Q76LX8 1427 aa7.09□□□□□ -1.28
LMNB1-205ENST00000472034 SOS2Q07890 1332 aaPredicted RBP7.08□□□□□ -1.28
LMNB1-205ENST00000472034 ADGRB3O60242 1522 aa7.08□□□□□ -1.28
LMNB1-205ENST00000472034 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.08□□□□□ -1.28
LMNB1-205ENST00000472034 TNS1Q9HBL0 1735 aaKnown RBP7.08□□□□□ -1.28
LMNB1-205ENST00000472034 MARF1Q9Y4F3 1742 aaKnown RBP7.08□□□□□ -1.28
LMNB1-205ENST00000472034 NUDT7P0C024 238 aa7.08□□□□□ -1.28
LMNB1-205ENST00000472034 PDIA6Q15084 440 aa7.08□□□□□ -1.28
LMNB1-205ENST00000472034 UNC5CLQ8IV45 518 aa7.08□□□□□ -1.28
LMNB1-205ENST00000472034 DCCP43146 1447 aa7.08□□□□□ -1.28
LMNB1-205ENST00000472034 CASKIN1Q8WXD9 1431 aa7.08□□□□□ -1.28
LMNB1-205ENST00000472034 COL22A1Q8NFW1 1626 aaPredicted RBP7.08□□□□□ -1.28
LMNB1-205ENST00000472034 CHD4Q14839 1912 aa7.07□□□□□ -1.28
LMNB1-205ENST00000472034 MYO5BQ9ULV0 1848 aa7.07□□□□□ -1.28
LMNB1-205ENST00000472034 KCNQ2O43526 872 aa7.07□□□□□ -1.28
LMNB1-205ENST00000472034 ST18O60284 1047 aa7.07□□□□□ -1.28
LMNB1-205ENST00000472034 PPP1R15AO75807 674 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms