RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 CDK19Q9BWU1 502 aa27.19■■□□□ 1.94
COMMD1-207ENST00000471704 CRYBG1Q9Y4K1 1723 aa27.19■■□□□ 1.94
COMMD1-207ENST00000471704 ONECUT3O60422 494 aaPredicted RBP27.18■■□□□ 1.94
COMMD1-207ENST00000471704 BRWD3Q6RI45 1802 aa27.18■■□□□ 1.94
COMMD1-207ENST00000471704 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
COMMD1-207ENST00000471704 CCDC125Q86Z20 511 aa27.16■■□□□ 1.94
COMMD1-207ENST00000471704 NRAPQ86VF7 1730 aa27.16■■□□□ 1.94
COMMD1-207ENST00000471704 COL14A1Q05707 1796 aaKnown RBP27.14■■□□□ 1.93
COMMD1-207ENST00000471704 POLR3AO14802 1390 aaPredicted RBP27.13■■□□□ 1.93
COMMD1-207ENST00000471704 SEPT12Q8IYM1 358 aa27.13■■□□□ 1.93
COMMD1-207ENST00000471704 CCDC61Q9Y6R9 512 aa27.13■■□□□ 1.93
COMMD1-207ENST00000471704 PLEKHG3A1L390 1219 aa27.12■■□□□ 1.93
COMMD1-207ENST00000471704 PAK3O75914 559 aaPredicted RBP27.12■■□□□ 1.93
COMMD1-207ENST00000471704 BTG4Q9NY30 223 aa27.11■■□□□ 1.93
COMMD1-207ENST00000471704 NBPF8Q3BBV2 869 aa27.09■■□□□ 1.93
COMMD1-207ENST00000471704 CCDC9Q9Y3X0 531 aaKnown RBP27.09■■□□□ 1.93
COMMD1-207ENST00000471704 ACEP12821 1306 aa27.09■■□□□ 1.93
COMMD1-207ENST00000471704 CENPJQ9HC77 1338 aaPredicted RBP27.08■■□□□ 1.93
COMMD1-207ENST00000471704 SRCAPQ6ZRS2 3230 aa27.05■■□□□ 1.92
COMMD1-207ENST00000471704 BLMP54132 1417 aaPredicted RBP27.05■■□□□ 1.92
COMMD1-207ENST00000471704 PHRF1Q9P1Y6 1649 aaKnown RBP27.04■■□□□ 1.92
COMMD1-207ENST00000471704 ROCK2O75116 1388 aaKnown RBP27.03■■□□□ 1.92
COMMD1-207ENST00000471704 PRDM11Q9NQV5 511 aa27.03■■□□□ 1.92
COMMD1-207ENST00000471704 SPATA31A5Q5VU36 1347 aa27.02■■□□□ 1.92
COMMD1-207ENST00000471704 SPATA31A7Q8IWB4 1347 aa27.02■■□□□ 1.92
COMMD1-207ENST00000471704 KRT27Q7Z3Y8 459 aa27.02■■□□□ 1.92
COMMD1-207ENST00000471704 KIAA0232Q92628 1395 aa27.01■■□□□ 1.91
COMMD1-207ENST00000471704 SRPK2P78362 688 aaKnown RBP27■■□□□ 1.91
COMMD1-207ENST00000471704 FAM98CQ17RN3 349 aaKnown RBP27■■□□□ 1.91
COMMD1-207ENST00000471704 CABP2Q9NPB3 220 aa27■■□□□ 1.91
COMMD1-207ENST00000471704 PPIP5K1Q6PFW1 1433 aa26.99■■□□□ 1.91
COMMD1-207ENST00000471704 NUTM2GQ5VZR2 741 aa26.99■■□□□ 1.91
COMMD1-207ENST00000471704 ZRANB1Q9UGI0 708 aa26.97■■□□□ 1.91
COMMD1-207ENST00000471704 CHRNA2Q15822 529 aa26.96■■□□□ 1.91
COMMD1-207ENST00000471704 ABTB2Q8N961 1025 aa26.96■■□□□ 1.91
COMMD1-207ENST00000471704 USP19O94966 1318 aa26.95■■□□□ 1.91
COMMD1-207ENST00000471704 ZC3H6P61129 1189 aaKnown RBP26.95■■□□□ 1.9
COMMD1-207ENST00000471704 TONSLQ96HA7 1378 aa26.95■■□□□ 1.9
COMMD1-207ENST00000471704 THSD7AQ9UPZ6 1657 aa26.95■■□□□ 1.9
COMMD1-207ENST00000471704 BRD4O60885 1362 aaPredicted RBP26.94■■□□□ 1.9
COMMD1-207ENST00000471704 NRKQ7Z2Y5 1582 aa26.93■■□□□ 1.9
COMMD1-207ENST00000471704 DEFB132Q7Z7B7 95 aa26.93■■□□□ 1.9
COMMD1-207ENST00000471704 SPATA31A1Q5TZJ5 1347 aa26.92■■□□□ 1.9
COMMD1-207ENST00000471704 A0A0G2JS52 829 aa26.92■■□□□ 1.9
COMMD1-207ENST00000471704 MYT1Q01538 1121 aa26.92■■□□□ 1.9
COMMD1-207ENST00000471704 CABP1Q9NZU7 370 aa26.92■■□□□ 1.9
COMMD1-207ENST00000471704 CPDO75976 1380 aa26.92■■□□□ 1.9
COMMD1-207ENST00000471704 AKAP12Q02952 1782 aa26.92■■□□□ 1.9
COMMD1-207ENST00000471704 SF3B2Q13435 895 aaKnown RBP26.9■■□□□ 1.9
COMMD1-207ENST00000471704 NLRP13Q86W25 1043 aa26.89■■□□□ 1.9
COMMD1-207ENST00000471704 USP6P35125 1406 aa26.89■■□□□ 1.89
COMMD1-207ENST00000471704 EVC2Q86UK5 1308 aa26.89■■□□□ 1.89
COMMD1-207ENST00000471704 LMO7Q8WWI1 1683 aa26.89■■□□□ 1.89
COMMD1-207ENST00000471704 CAMTA1Q9Y6Y1 1673 aa26.89■■□□□ 1.89
COMMD1-207ENST00000471704 SSH2Q76I76 1423 aa26.88■■□□□ 1.89
COMMD1-207ENST00000471704 GCP02774 474 aa26.87■■□□□ 1.89
COMMD1-207ENST00000471704 STRN4Q9NRL3 753 aa26.87■■□□□ 1.89
COMMD1-207ENST00000471704 PIK3C2AO00443 1686 aa26.85■■□□□ 1.89
COMMD1-207ENST00000471704 CARD11Q9BXL7 1154 aa26.84■■□□□ 1.89
COMMD1-207ENST00000471704 SBNO2Q9Y2G9 1366 aa26.84■■□□□ 1.89
COMMD1-207ENST00000471704 EVA1CP58658 441 aa26.83■■□□□ 1.89
COMMD1-207ENST00000471704 FAM182BQ5T319 152 aa26.83■■□□□ 1.89
COMMD1-207ENST00000471704 BARGINQ6ZT62 677 aa26.82■■□□□ 1.88
COMMD1-207ENST00000471704 LARP1Q6PKG0 1096 aaKnown RBP26.81■■□□□ 1.88
COMMD1-207ENST00000471704 RGPD1P0DJD0 1748 aa26.81■■□□□ 1.88
COMMD1-207ENST00000471704 MON2Q7Z3U7 1717 aa26.81■■□□□ 1.88
COMMD1-207ENST00000471704 SLIT3O75094 1523 aa26.8■■□□□ 1.88
COMMD1-207ENST00000471704 BAG6P46379 1132 aa26.8■■□□□ 1.88
COMMD1-207ENST00000471704 NLRP6P59044 892 aa26.8■■□□□ 1.88
COMMD1-207ENST00000471704 ZNF692Q9BU19 519 aaPredicted RBP26.78■■□□□ 1.88
COMMD1-207ENST00000471704 USP35Q9P2H5 1018 aa26.78■■□□□ 1.88
COMMD1-207ENST00000471704 COL5A2P05997 1499 aaPredicted RBP26.77■■□□□ 1.88
COMMD1-207ENST00000471704 TCP11L2Q8N4U5 519 aa26.76■■□□□ 1.87
COMMD1-207ENST00000471704 TNS1Q9HBL0 1735 aaKnown RBP26.76■■□□□ 1.87
COMMD1-207ENST00000471704 DISP2A7MBM2 1401 aa26.75■■□□□ 1.87
COMMD1-207ENST00000471704 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
COMMD1-207ENST00000471704 AATKQ6ZMQ8 1374 aa26.75■■□□□ 1.87
COMMD1-207ENST00000471704 TTC21BQ7Z4L5 1316 aa26.75■■□□□ 1.87
COMMD1-207ENST00000471704 FAM196AQ6ZSG2 479 aa26.75■■□□□ 1.87
COMMD1-207ENST00000471704 COL18A1P39060 1754 aa26.74■■□□□ 1.87
COMMD1-207ENST00000471704 THRAP3Q9Y2W1 955 aaKnown RBP26.74■■□□□ 1.87
COMMD1-207ENST00000471704 EN1Q05925 392 aaPredicted RBP26.73■■□□□ 1.87
COMMD1-207ENST00000471704 CD163L1Q9NR16 1453 aa26.73■■□□□ 1.87
COMMD1-207ENST00000471704 TTC21AQ8NDW8 1320 aa26.7■■□□□ 1.87
COMMD1-207ENST00000471704 CRB1P82279 1406 aa26.69■■□□□ 1.86
COMMD1-207ENST00000471704 PDE3BQ13370 1112 aa26.69■■□□□ 1.86
COMMD1-207ENST00000471704 PARP4Q9UKK3 1724 aaKnown RBP26.69■■□□□ 1.86
COMMD1-207ENST00000471704 USP54Q70EL1 1684 aa26.69■■□□□ 1.86
COMMD1-207ENST00000471704 TRIM37O94972 964 aa26.68■■□□□ 1.86
COMMD1-207ENST00000471704 ARHGEF25Q86VW2 580 aa26.67■■□□□ 1.86
COMMD1-207ENST00000471704 TESK2Q96S53 571 aa26.67■■□□□ 1.86
COMMD1-207ENST00000471704 PCGF6Q9BYE7 350 aa26.67■■□□□ 1.86
COMMD1-207ENST00000471704 AXIN2Q9Y2T1 843 aa26.67■■□□□ 1.86
COMMD1-207ENST00000471704 KTN1Q86UP2 1357 aaKnown RBP26.67■■□□□ 1.86
COMMD1-207ENST00000471704 ZBTB7CA1YPR0 619 aa26.66■■□□□ 1.86
COMMD1-207ENST00000471704 RGPD5Q99666 1765 aa26.66■■□□□ 1.86
COMMD1-207ENST00000471704 KCNH5Q8NCM2 988 aa26.65■■□□□ 1.86
COMMD1-207ENST00000471704 CAMKK2Q96RR4 588 aa26.65■■□□□ 1.86
COMMD1-207ENST00000471704 ST20-MTHFSA0A0A6YYL1 179 aa26.64■■□□□ 1.86
COMMD1-207ENST00000471704 EZH2Q15910 746 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms