RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TSPYL1Q9H0U9 437 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 ACBD3Q9H3P7 528 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 ARGLU1Q9NWB6 273 aaPredicted RBP15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 BICDL1Q6ZP65 573 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 TAX1BP1Q86VP1 789 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 SURF6O75683 361 aaKnown RBP15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 TTC39AQ5SRH9 613 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 NF2P35240 595 aa15.79■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 ROCK1Q13464 1354 aa15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 API5Q9BZZ5 524 aaKnown RBP15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 TRIM5Q9C035 493 aa15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 SSR1P43307 286 aaKnown RBP15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 CLASRPQ8N2M8 674 aaKnown RBP15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 SPC24Q8NBT2 197 aa15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 CABP2Q9NPB3 220 aa15.78■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 MAP4K4O95819 1239 aaPredicted RBP15.77■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 PSMD1Q99460 953 aa15.77■□□□□ 0.12
NPHP3-ACAD11-201ENST00000471702 RRP1P56182 461 aaKnown RBP15.77■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 DEF6Q9H4E7 631 aa15.77■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 KINO60870 393 aaKnown RBP15.77■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 NOM1Q5C9Z4 860 aaKnown RBP15.77■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 JPH4Q96JJ6 628 aa15.77■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 PHLDB1Q86UU1 1377 aa15.77■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 ABCC8Q09428 1581 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 WDR78Q5VTH9 848 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 DDX23Q9BUQ8 820 aaKnown RBP15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 EZRP15311 586 aaKnown RBP15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 USP5P45974 858 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 FILIP1LQ4L180 1135 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 PANK1Q8TE04 598 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CCDC85AQ96PX6 553 aaPredicted RBP15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 TOM1L2Q6ZVM7 507 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 MPNDQ8N594 471 aa15.76■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 TMEM132EQ6IEE7 984 aa15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 PKNOX2Q96KN3 472 aa15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 NINLQ9Y2I6 1382 aa15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 FKBP4Q02790 459 aaKnown RBP eCLIP15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 C1orf115Q9H7X2 142 aa15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 MPHOSPH8Q99549 860 aa15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 FMN1Q68DA7 1419 aa15.75■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CCDC181Q5TID7 509 aa15.74■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 PSMA5P28066 241 aa15.74■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CHMP5Q9NZZ3 219 aa15.74■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 SMARCE1Q969G3 411 aa15.74■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 UACAQ9BZF9 1416 aa15.73■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 ZNF76P36508 570 aa15.73■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 GNL3LQ9NVN8 582 aaKnown RBP15.73■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 TRIM21P19474 475 aaKnown RBP15.73■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 TTLL12Q14166 644 aaPredicted RBP15.72■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 FIBPO43427 364 aa15.72■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 TTC16Q8NEE8 873 aa15.72■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 TRMT1LQ7Z2T5 733 aaKnown RBP15.72■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CCDC158Q5M9N0 1113 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 C22orf23Q9BZE7 217 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 GBP2P32456 591 aaPredicted RBP15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 SCLT1Q96NL6 688 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CABP4P57796 275 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 ZNHIT6Q9NWK9 470 aaKnown RBP15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 ERLIN2O94905 339 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 SERPINC1P01008 464 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 NUCB2P80303 420 aa15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 PROSER2Q86WR7 435 aaPredicted RBP15.71■□□□□ 0.11
NPHP3-ACAD11-201ENST00000471702 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 FAM193AP78312 1265 aa15.71■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 DESP17661 470 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 HOMER2Q9NSB8 354 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 GNAI1P63096 354 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 DRC1Q96MC2 740 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 DYDC1Q8WWB3 177 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 CA8P35219 290 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 STK38Q15208 465 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 TAF3Q5VWG9 929 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 FAM43AQ8N2R8 423 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 CCDC69A6NI79 296 aa15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 NEK4P51957 841 aa15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 GRM1Q13255 1194 aa15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 LRRFIP2Q9Y608 721 aaKnown RBP15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 GOLGA6L10A6NI86 522 aa15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 SOGA3Q5TF21 947 aa15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 NASPP49321 788 aaPredicted RBP15.68■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 CCDC30Q5VVM6 783 aa15.68■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 GPRASP1Q5JY77 1395 aa15.67■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 USP47Q96K76 1375 aa15.67■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 ME1P48163 572 aa15.67■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 PUS7Q96PZ0 661 aaKnown RBP15.67■□□□□ 0.1
NPHP3-ACAD11-201ENST00000471702 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms