RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 TSHZ2Q9NRE2 1034 aa5.97□□□□□ -1.45
SCN3A-207ENST00000471697 KDM2AQ9Y2K7 1162 aa5.97□□□□□ -1.45
SCN3A-207ENST00000471697 WDR4P57081 412 aaKnown RBP5.96□□□□□ -1.46
SCN3A-207ENST00000471697 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.46
SCN3A-207ENST00000471697 CNTNAP3BQ96NU0 1288 aa5.96□□□□□ -1.46
SCN3A-207ENST00000471697 CNTNAP3Q9BZ76 1288 aa5.96□□□□□ -1.46
SCN3A-207ENST00000471697 TLL2Q9Y6L7 1015 aa5.96□□□□□ -1.46
SCN3A-207ENST00000471697 GPR37O15354 613 aa5.95□□□□□ -1.46
SCN3A-207ENST00000471697 SLURP2P0DP57 97 aa5.95□□□□□ -1.46
SCN3A-207ENST00000471697 VARSP26640 1264 aaKnown RBP5.95□□□□□ -1.46
SCN3A-207ENST00000471697 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
SCN3A-207ENST00000471697 SVOPQ8N4V2 548 aa5.94□□□□□ -1.46
SCN3A-207ENST00000471697 NANOS1Q8WY41 292 aaKnown RBP5.94□□□□□ -1.46
SCN3A-207ENST00000471697 PSMG3-AS1Q96PY0 264 aa5.94□□□□□ -1.46
SCN3A-207ENST00000471697 HOXA2O43364 376 aa5.93□□□□□ -1.46
SCN3A-207ENST00000471697 RANGAP1P46060 587 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-207ENST00000471697 SCARF2Q96GP6 870 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-207ENST00000471697 CCNYL3P0C7X3 344 aa5.92□□□□□ -1.46
SCN3A-207ENST00000471697 TMEM132AQ24JP5 1023 aa5.92□□□□□ -1.46
SCN3A-207ENST00000471697 RETREG3Q86VR2 466 aa5.92□□□□□ -1.46
SCN3A-207ENST00000471697 HLA-CQ95604 372 aa5.92□□□□□ -1.46
SCN3A-207ENST00000471697 COL25A1Q9BXS0 654 aaPredicted RBP5.92□□□□□ -1.46
SCN3A-207ENST00000471697 SOS2Q07890 1332 aaPredicted RBP5.92□□□□□ -1.46
SCN3A-207ENST00000471697 MSTNO14793 375 aa5.91□□□□□ -1.46
SCN3A-207ENST00000471697 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.46
SCN3A-207ENST00000471697 ZNF511Q8NB15 262 aa5.9□□□□□ -1.46
SCN3A-207ENST00000471697 WHAMMQ8TF30 809 aa5.9□□□□□ -1.46
SCN3A-207ENST00000471697 CDK15Q96Q40 435 aa5.9□□□□□ -1.46
SCN3A-207ENST00000471697 UNC93B1Q9H1C4 597 aa5.9□□□□□ -1.46
SCN3A-207ENST00000471697 EVA1BQ9NVM1 165 aa5.9□□□□□ -1.46
SCN3A-207ENST00000471697 DNMT3LQ9UJW3 386 aa5.9□□□□□ -1.46
SCN3A-207ENST00000471697 SEMA3EO15041 775 aa5.89□□□□□ -1.47
SCN3A-207ENST00000471697 PTPRNQ16849 979 aa5.89□□□□□ -1.47
SCN3A-207ENST00000471697 RNFT1Q5M7Z0 435 aa5.89□□□□□ -1.47
SCN3A-207ENST00000471697 BAP1Q92560 729 aa5.89□□□□□ -1.47
SCN3A-207ENST00000471697 ZIC2O95409 532 aaPredicted RBP5.88□□□□□ -1.47
SCN3A-207ENST00000471697 MS4A1P11836 297 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 PLA2G4EQ3MJ16 856 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 C6orf118Q5T5N4 469 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 LINC00528Q8N1L1 170 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 MEIOBQ8N635 442 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 ITPKCQ96DU7 683 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 SPOCK3Q9BQ16 436 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 ZFAND3Q9H8U3 227 aa5.88□□□□□ -1.47
SCN3A-207ENST00000471697 UPP2O95045 317 aa5.87□□□□□ -1.47
SCN3A-207ENST00000471697 ITGB2P05107 769 aa5.87□□□□□ -1.47
SCN3A-207ENST00000471697 BMP2P12643 396 aa5.87□□□□□ -1.47
SCN3A-207ENST00000471697 NR5A1Q13285 461 aa5.87□□□□□ -1.47
SCN3A-207ENST00000471697 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.87□□□□□ -1.47
SCN3A-207ENST00000471697 RBM26Q5T8P6 1007 aaKnown RBP5.87□□□□□ -1.47
SCN3A-207ENST00000471697 KRTAP1-3Q8IUG1 177 aa5.87□□□□□ -1.47
SCN3A-207ENST00000471697 FAM174AQ8TBP5 190 aa5.87□□□□□ -1.47
SCN3A-207ENST00000471697 SYMPKQ92797 1274 aaKnown RBP5.87□□□□□ -1.47
SCN3A-207ENST00000471697 PROCP04070 461 aa5.86□□□□□ -1.47
SCN3A-207ENST00000471697 KCNH2Q12809 1159 aa5.86□□□□□ -1.47
SCN3A-207ENST00000471697 LINC01559Q495D7 138 aa5.86□□□□□ -1.47
SCN3A-207ENST00000471697 GUCA2AQ02747 115 aa5.85□□□□□ -1.47
SCN3A-207ENST00000471697 PTSQ03393 145 aa5.85□□□□□ -1.47
SCN3A-207ENST00000471697 Q8N3U1 123 aa5.85□□□□□ -1.47
SCN3A-207ENST00000471697 TESPA1A2RU30 521 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-207ENST00000471697 SPTLC1O15269 473 aa5.84□□□□□ -1.47
SCN3A-207ENST00000471697 NR3C2P08235 984 aa5.84□□□□□ -1.47
SCN3A-207ENST00000471697 P3H3Q8IVL6 736 aa5.84□□□□□ -1.47
SCN3A-207ENST00000471697 DCAF5Q96JK2 942 aa5.84□□□□□ -1.47
SCN3A-207ENST00000471697 PODXL2Q9NZ53 605 aa5.84□□□□□ -1.47
SCN3A-207ENST00000471697 SMYD5Q6GMV2 418 aa5.83□□□□□ -1.48
SCN3A-207ENST00000471697 C14orf37Q86TY3 774 aa5.83□□□□□ -1.48
SCN3A-207ENST00000471697 CCDC155Q8N6L0 562 aa5.83□□□□□ -1.48
SCN3A-207ENST00000471697 TSEN34Q9BSV6 310 aaKnown RBP5.83□□□□□ -1.48
SCN3A-207ENST00000471697 SLC35F4A4IF30 521 aa5.82□□□□□ -1.48
SCN3A-207ENST00000471697 K7ELQ4 463 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-207ENST00000471697 GRM5P41594 1212 aa5.82□□□□□ -1.48
SCN3A-207ENST00000471697 TTLL8A6PVC2 850 aa5.81□□□□□ -1.48
SCN3A-207ENST00000471697 PHF20L1A8MW92 1017 aa5.81□□□□□ -1.48
SCN3A-207ENST00000471697 DESI1Q6ICB0 168 aa5.81□□□□□ -1.48
SCN3A-207ENST00000471697 LYPD4Q6UWN0 246 aa5.81□□□□□ -1.48
SCN3A-207ENST00000471697 ADAMTS2O95450 1211 aa5.8□□□□□ -1.48
SCN3A-207ENST00000471697 ITGA6P23229 1130 aa5.8□□□□□ -1.48
SCN3A-207ENST00000471697 MAP3K10Q02779 954 aa5.8□□□□□ -1.48
SCN3A-207ENST00000471697 SRSF11Q05519 484 aaKnown RBP5.8□□□□□ -1.48
SCN3A-207ENST00000471697 SV2AQ7L0J3 742 aa5.8□□□□□ -1.48
SCN3A-207ENST00000471697 PCDHGC3Q9UN70 934 aa5.8□□□□□ -1.48
SCN3A-207ENST00000471697 CELA2BP08218 269 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-207ENST00000471697 FDX1P10109 184 aa5.79□□□□□ -1.48
SCN3A-207ENST00000471697 ENAMQ9NRM1 1142 aa5.79□□□□□ -1.48
SCN3A-207ENST00000471697 C6orf229H3BNL8 230 aa5.78□□□□□ -1.48
SCN3A-207ENST00000471697 VWA5B2Q8N398 1253 aa5.78□□□□□ -1.48
SCN3A-207ENST00000471697 GALNT6Q8NCL4 622 aa5.78□□□□□ -1.48
SCN3A-207ENST00000471697 ARID5BQ14865 1188 aa5.77□□□□□ -1.49
SCN3A-207ENST00000471697 SPINT1O43278 529 aa5.76□□□□□ -1.49
SCN3A-207ENST00000471697 MDM2Q00987 491 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-207ENST00000471697 MAP2K5Q13163 448 aa5.76□□□□□ -1.49
SCN3A-207ENST00000471697 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
SCN3A-207ENST00000471697 NUTM1Q86Y26 1132 aa5.76□□□□□ -1.49
SCN3A-207ENST00000471697 BEND7Q8N7W2 519 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-207ENST00000471697 FOXJ1Q92949 421 aa5.76□□□□□ -1.49
SCN3A-207ENST00000471697 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
SCN3A-207ENST00000471697 SPDYE5A6NIY4 337 aa5.75□□□□□ -1.49
SCN3A-207ENST00000471697 PRR7Q8TB68 274 aa5.75□□□□□ -1.49
SCN3A-207ENST00000471697 MAP4K5Q9Y4K4 846 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms