RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 NME9Q86XW9 330 aa26.24■■□□□ 1.79
PSPC1-203ENST00000471658 ZRANB1Q9UGI0 708 aa26.24■■□□□ 1.79
PSPC1-203ENST00000471658 CGNL1Q0VF96 1302 aa26.24■■□□□ 1.79
PSPC1-203ENST00000471658 GGNBP2Q9H3C7 697 aa26.23■■□□□ 1.79
PSPC1-203ENST00000471658 PAK3O75914 559 aaPredicted RBP26.22■■□□□ 1.79
PSPC1-203ENST00000471658 NRKQ7Z2Y5 1582 aa26.21■■□□□ 1.79
PSPC1-203ENST00000471658 NPHP3Q7Z494 1330 aa26.21■■□□□ 1.79
PSPC1-203ENST00000471658 ANP32CO43423 234 aa26.2■■□□□ 1.78
PSPC1-203ENST00000471658 ROBO1Q9Y6N7 1651 aa26.2■■□□□ 1.78
PSPC1-203ENST00000471658 SCAF1Q9H7N4 1312 aaKnown RBP26.19■■□□□ 1.78
PSPC1-203ENST00000471658 MIER1Q8N108 512 aa26.19■■□□□ 1.78
PSPC1-203ENST00000471658 PRKRIP1Q9H875 184 aaPredicted RBP26.19■■□□□ 1.78
PSPC1-203ENST00000471658 NPC1L1Q9UHC9 1359 aa26.18■■□□□ 1.78
PSPC1-203ENST00000471658 TTC21AQ8NDW8 1320 aa26.17■■□□□ 1.78
PSPC1-203ENST00000471658 NUTM2GQ5VZR2 741 aa26.17■■□□□ 1.78
PSPC1-203ENST00000471658 PXDNQ92626 1479 aa26.16■■□□□ 1.78
PSPC1-203ENST00000471658 ABTB2Q8N961 1025 aa26.14■■□□□ 1.78
PSPC1-203ENST00000471658 BRD4O60885 1362 aaPredicted RBP26.14■■□□□ 1.78
PSPC1-203ENST00000471658 SOS2Q07890 1332 aaPredicted RBP26.14■■□□□ 1.77
PSPC1-203ENST00000471658 TRPM3Q9HCF6 1732 aaPredicted RBP26.14■■□□□ 1.77
PSPC1-203ENST00000471658 LMOD2Q6P5Q4 547 aa26.14■■□□□ 1.77
PSPC1-203ENST00000471658 MORC1Q86VD1 984 aa26.14■■□□□ 1.77
PSPC1-203ENST00000471658 KIF20BQ96Q89 1820 aa26.13■■□□□ 1.77
PSPC1-203ENST00000471658 NHSL1Q5SYE7 1610 aa26.12■■□□□ 1.77
PSPC1-203ENST00000471658 TNNT2P45379 298 aaPredicted RBP26.12■■□□□ 1.77
PSPC1-203ENST00000471658 NSD2O96028 1365 aa26.12■■□□□ 1.77
PSPC1-203ENST00000471658 PARD3Q8TEW0 1356 aa26.12■■□□□ 1.77
PSPC1-203ENST00000471658 NLRP6P59044 892 aa26.11■■□□□ 1.77
PSPC1-203ENST00000471658 PIK3C2AO00443 1686 aa26.11■■□□□ 1.77
PSPC1-203ENST00000471658 SBNO1A3KN83 1393 aa26.1■■□□□ 1.77
PSPC1-203ENST00000471658 PLEKHG5O94827 1062 aa26.1■■□□□ 1.77
PSPC1-203ENST00000471658 RALBP1Q15311 655 aa26.1■■□□□ 1.77
PSPC1-203ENST00000471658 COG3Q96JB2 828 aa26.1■■□□□ 1.77
PSPC1-203ENST00000471658 FBLN1P23142 703 aa26.09■■□□□ 1.77
PSPC1-203ENST00000471658 SPATA31A3Q5VYP0 1347 aa26.09■■□□□ 1.77
PSPC1-203ENST00000471658 USP31Q70CQ4 1352 aa26.08■■□□□ 1.76
PSPC1-203ENST00000471658 OVOS2A0A0J9YW53 1432 aa26.07■■□□□ 1.76
PSPC1-203ENST00000471658 OVOS2Q6IE36 1432 aa26.07■■□□□ 1.76
PSPC1-203ENST00000471658 AHDC1Q5TGY3 1603 aaPredicted RBP26.07■■□□□ 1.76
PSPC1-203ENST00000471658 TNS3Q68CZ2 1445 aa26.06■■□□□ 1.76
PSPC1-203ENST00000471658 ALS2Q96Q42 1657 aa26.05■■□□□ 1.76
PSPC1-203ENST00000471658 ANKRD26Q9UPS8 1709 aa26.04■■□□□ 1.76
PSPC1-203ENST00000471658 SOX12O15370 315 aa26.04■■□□□ 1.76
PSPC1-203ENST00000471658 PPP2R1AP30153 589 aa26.03■■□□□ 1.76
PSPC1-203ENST00000471658 NLRP13Q86W25 1043 aa26.03■■□□□ 1.76
PSPC1-203ENST00000471658 MYBBP1AQ9BQG0 1328 aaKnown RBP26.02■■□□□ 1.76
PSPC1-203ENST00000471658 MARF1Q9Y4F3 1742 aaKnown RBP26.02■■□□□ 1.76
PSPC1-203ENST00000471658 CCDC184Q52MB2 194 aa26.01■■□□□ 1.75
PSPC1-203ENST00000471658 PHLPP1O60346 1717 aa26■■□□□ 1.75
PSPC1-203ENST00000471658 CABLES1Q8TDN4 633 aa26■■□□□ 1.75
PSPC1-203ENST00000471658 LRRC59Q96AG4 307 aaKnown RBP25.99■■□□□ 1.75
PSPC1-203ENST00000471658 ARHGEF10O15013 1369 aa25.98■■□□□ 1.75
PSPC1-203ENST00000471658 COL16A1Q07092 1604 aaPredicted RBP25.97■■□□□ 1.75
PSPC1-203ENST00000471658 USP54Q70EL1 1684 aa25.97■■□□□ 1.75
PSPC1-203ENST00000471658 MED1Q15648 1581 aaPredicted RBP25.97■■□□□ 1.75
PSPC1-203ENST00000471658 USP19O94966 1318 aa25.96■■□□□ 1.75
PSPC1-203ENST00000471658 RRS1Q15050 365 aaKnown RBP25.96■■□□□ 1.75
PSPC1-203ENST00000471658 POLKQ9UBT6 870 aa25.96■■□□□ 1.75
PSPC1-203ENST00000471658 GCP02774 474 aa25.95■■□□□ 1.74
PSPC1-203ENST00000471658 MTHFSP49914 203 aa25.95■■□□□ 1.74
PSPC1-203ENST00000471658 EMILIN1Q9Y6C2 1016 aa25.94■■□□□ 1.74
PSPC1-203ENST00000471658 HSPA1LP34931 641 aa25.92■■□□□ 1.74
PSPC1-203ENST00000471658 AATKQ6ZMQ8 1374 aa25.92■■□□□ 1.74
PSPC1-203ENST00000471658 SLIT3O75094 1523 aa25.92■■□□□ 1.74
PSPC1-203ENST00000471658 PNPLA6Q8IY17 1366 aa25.91■■□□□ 1.74
PSPC1-203ENST00000471658 CCER2I3L3R5 266 aa25.91■■□□□ 1.74
PSPC1-203ENST00000471658 PPM1GO15355 546 aaPredicted RBP25.91■■□□□ 1.74
PSPC1-203ENST00000471658 KCNH5Q8NCM2 988 aa25.91■■□□□ 1.74
PSPC1-203ENST00000471658 MAP3K19Q56UN5 1328 aa25.9■■□□□ 1.74
PSPC1-203ENST00000471658 ZC3H6P61129 1189 aaKnown RBP25.89■■□□□ 1.74
PSPC1-203ENST00000471658 NFAT5O94916 1531 aa25.89■■□□□ 1.74
PSPC1-203ENST00000471658 MAP2P11137 1827 aaKnown RBP25.89■■□□□ 1.74
PSPC1-203ENST00000471658 MRS2Q9HD23 443 aa25.88■■□□□ 1.73
PSPC1-203ENST00000471658 ZBTB7CA1YPR0 619 aa25.88■■□□□ 1.73
PSPC1-203ENST00000471658 CRYBG1Q9Y4K1 1723 aa25.87■■□□□ 1.73
PSPC1-203ENST00000471658 PHRF1Q9P1Y6 1649 aaKnown RBP25.87■■□□□ 1.73
PSPC1-203ENST00000471658 ARHGEF25Q86VW2 580 aa25.85■■□□□ 1.73
PSPC1-203ENST00000471658 HAP1P54257 671 aaPredicted RBP25.84■■□□□ 1.73
PSPC1-203ENST00000471658 PEAK1Q9H792 1746 aa25.83■■□□□ 1.73
PSPC1-203ENST00000471658 SMG6Q86US8 1419 aaKnown RBP25.83■■□□□ 1.73
PSPC1-203ENST00000471658 AMPHP49418 695 aa25.82■■□□□ 1.72
PSPC1-203ENST00000471658 COL22A1Q8NFW1 1626 aaPredicted RBP25.82■■□□□ 1.72
PSPC1-203ENST00000471658 ABCA3Q99758 1704 aa25.81■■□□□ 1.72
PSPC1-203ENST00000471658 HSP90AB2PQ58FF8 381 aa25.81■■□□□ 1.72
PSPC1-203ENST00000471658 KIAA0232Q92628 1395 aa25.8■■□□□ 1.72
PSPC1-203ENST00000471658 JCADQ9P266 1359 aa25.8■■□□□ 1.72
PSPC1-203ENST00000471658 CHRNA2Q15822 529 aa25.8■■□□□ 1.72
PSPC1-203ENST00000471658 NUTM2BA6NNL0 878 aaPredicted RBP25.79■■□□□ 1.72
PSPC1-203ENST00000471658 NUTM2EB1AL46 878 aaPredicted RBP25.79■■□□□ 1.72
PSPC1-203ENST00000471658 HOXC9P31274 260 aa25.79■■□□□ 1.72
PSPC1-203ENST00000471658 NUTM2AQ8IVF1 878 aaPredicted RBP25.79■■□□□ 1.72
PSPC1-203ENST00000471658 CFAP53Q96M91 514 aa25.78■■□□□ 1.72
PSPC1-203ENST00000471658 LTN1O94822 1766 aa25.78■■□□□ 1.72
PSPC1-203ENST00000471658 IP6K1Q92551 441 aa25.77■■□□□ 1.72
PSPC1-203ENST00000471658 FBXO41Q8TF61 875 aa25.77■■□□□ 1.72
PSPC1-203ENST00000471658 AXIN2Q9Y2T1 843 aa25.77■■□□□ 1.72
PSPC1-203ENST00000471658 COL3A1P02461 1466 aaPredicted RBP25.77■■□□□ 1.72
PSPC1-203ENST00000471658 CDK12Q9NYV4 1490 aaPredicted RBP25.77■■□□□ 1.72
PSPC1-203ENST00000471658 FLT4P35916 1363 aa25.76■■□□□ 1.71
PSPC1-203ENST00000471658 SHPRHQ149N8 1683 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms