RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.15
LINC00880-201ENST00000471357 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.15
LINC00880-201ENST00000471357 COG3Q96JB2 828 aa16.01■□□□□ 0.15
LINC00880-201ENST00000471357 SSH2Q76I76 1423 aa16■□□□□ 0.15
LINC00880-201ENST00000471357 INSRP06213 1382 aa16■□□□□ 0.15
LINC00880-201ENST00000471357 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
LINC00880-201ENST00000471357 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
LINC00880-201ENST00000471357 CFAP53Q96M91 514 aa16■□□□□ 0.15
LINC00880-201ENST00000471357 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
LINC00880-201ENST00000471357 TTC21AQ8NDW8 1320 aa16■□□□□ 0.15
LINC00880-201ENST00000471357 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
LINC00880-201ENST00000471357 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
LINC00880-201ENST00000471357 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
LINC00880-201ENST00000471357 ZNF335Q9H4Z2 1342 aaPredicted RBP15.98■□□□□ 0.15
LINC00880-201ENST00000471357 ATF3P18847 181 aa15.98■□□□□ 0.15
LINC00880-201ENST00000471357 DCCP43146 1447 aa15.97■□□□□ 0.15
LINC00880-201ENST00000471357 ORAI2Q96SN7 254 aa15.96■□□□□ 0.15
LINC00880-201ENST00000471357 C1orf167Q5SNV9 1468 aa15.95■□□□□ 0.14
LINC00880-201ENST00000471357 MSH6P52701 1360 aa15.95■□□□□ 0.14
LINC00880-201ENST00000471357 AATKQ6ZMQ8 1374 aa15.95■□□□□ 0.14
LINC00880-201ENST00000471357 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
LINC00880-201ENST00000471357 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
LINC00880-201ENST00000471357 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
LINC00880-201ENST00000471357 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
LINC00880-201ENST00000471357 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
LINC00880-201ENST00000471357 PSME1Q06323 249 aa15.94■□□□□ 0.14
LINC00880-201ENST00000471357 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
LINC00880-201ENST00000471357 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
LINC00880-201ENST00000471357 FBLN1P23142 703 aa15.94■□□□□ 0.14
LINC00880-201ENST00000471357 USP31Q70CQ4 1352 aa15.93■□□□□ 0.14
LINC00880-201ENST00000471357 MST1RQ04912 1400 aa15.93■□□□□ 0.14
LINC00880-201ENST00000471357 PNPLA6Q8IY17 1366 aa15.92■□□□□ 0.14
LINC00880-201ENST00000471357 PAK3O75914 559 aaPredicted RBP15.92■□□□□ 0.14
LINC00880-201ENST00000471357 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
LINC00880-201ENST00000471357 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
LINC00880-201ENST00000471357 FOXO3O43524 673 aa15.91■□□□□ 0.14
LINC00880-201ENST00000471357 XIRP1Q702N8 1843 aaKnown RBP15.91■□□□□ 0.14
LINC00880-201ENST00000471357 NLRP6P59044 892 aa15.9■□□□□ 0.14
LINC00880-201ENST00000471357 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
LINC00880-201ENST00000471357 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
LINC00880-201ENST00000471357 EMILIN1Q9Y6C2 1016 aa15.9■□□□□ 0.14
LINC00880-201ENST00000471357 SHPRHQ149N8 1683 aa15.9■□□□□ 0.14
LINC00880-201ENST00000471357 MAP2P11137 1827 aaKnown RBP15.9■□□□□ 0.14
LINC00880-201ENST00000471357 COL3A1P02461 1466 aaPredicted RBP15.89■□□□□ 0.13
LINC00880-201ENST00000471357 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
LINC00880-201ENST00000471357 DIAPH1O60610 1272 aaKnown RBP15.89■□□□□ 0.13
LINC00880-201ENST00000471357 RRS1Q15050 365 aaKnown RBP15.89■□□□□ 0.13
LINC00880-201ENST00000471357 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
LINC00880-201ENST00000471357 KIF1AQ12756 1690 aa15.89■□□□□ 0.13
LINC00880-201ENST00000471357 KRT28Q7Z3Y7 464 aa15.87■□□□□ 0.13
LINC00880-201ENST00000471357 CCDC146Q8IYE0 955 aa15.87■□□□□ 0.13
LINC00880-201ENST00000471357 SALL2Q9Y467 1007 aaPredicted RBP15.87■□□□□ 0.13
LINC00880-201ENST00000471357 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
LINC00880-201ENST00000471357 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC00880-201ENST00000471357 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
LINC00880-201ENST00000471357 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
LINC00880-201ENST00000471357 NUTM2GQ5VZR2 741 aa15.86■□□□□ 0.13
LINC00880-201ENST00000471357 SOX12O15370 315 aa15.85■□□□□ 0.13
LINC00880-201ENST00000471357 XPCQ01831 940 aaPredicted RBP15.85■□□□□ 0.13
LINC00880-201ENST00000471357 RUNDC1Q96C34 613 aa15.84■□□□□ 0.13
LINC00880-201ENST00000471357 USP54Q70EL1 1684 aa15.84■□□□□ 0.13
LINC00880-201ENST00000471357 APAF1O14727 1248 aa15.84■□□□□ 0.13
LINC00880-201ENST00000471357 SLAIN2Q9P270 581 aa15.83■□□□□ 0.12
LINC00880-201ENST00000471357 NPHP3Q7Z494 1330 aa15.83■□□□□ 0.12
LINC00880-201ENST00000471357 IL13P35225 146 aa15.82■□□□□ 0.12
LINC00880-201ENST00000471357 PDE3BQ13370 1112 aa15.82■□□□□ 0.12
LINC00880-201ENST00000471357 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
LINC00880-201ENST00000471357 NGEFQ8N5V2 710 aa15.82■□□□□ 0.12
LINC00880-201ENST00000471357 MARF1Q9Y4F3 1742 aaKnown RBP15.81■□□□□ 0.12
LINC00880-201ENST00000471357 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
LINC00880-201ENST00000471357 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
LINC00880-201ENST00000471357 LMOD2Q6P5Q4 547 aa15.8■□□□□ 0.12
LINC00880-201ENST00000471357 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
LINC00880-201ENST00000471357 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
LINC00880-201ENST00000471357 SBNO1A3KN83 1393 aa15.8■□□□□ 0.12
LINC00880-201ENST00000471357 AMPHP49418 695 aa15.8■□□□□ 0.12
LINC00880-201ENST00000471357 KCNH5Q8NCM2 988 aa15.8■□□□□ 0.12
LINC00880-201ENST00000471357 FCHSD2O94868 740 aa15.79■□□□□ 0.12
LINC00880-201ENST00000471357 HSP90AB2PQ58FF8 381 aa15.79■□□□□ 0.12
LINC00880-201ENST00000471357 TCP11L2Q8N4U5 519 aa15.79■□□□□ 0.12
LINC00880-201ENST00000471357 FLT4P35916 1363 aa15.79■□□□□ 0.12
LINC00880-201ENST00000471357 PLEKHF1Q96S99 279 aa15.78■□□□□ 0.12
LINC00880-201ENST00000471357 GTF3C3Q9Y5Q9 886 aa15.78■□□□□ 0.12
LINC00880-201ENST00000471357 KIF24Q5T7B8 1368 aa15.78■□□□□ 0.12
LINC00880-201ENST00000471357 PEAK1Q9H792 1746 aa15.78■□□□□ 0.12
LINC00880-201ENST00000471357 EIF4A2Q14240 407 aaKnown RBP15.78■□□□□ 0.12
LINC00880-201ENST00000471357 ZNF521Q96K83 1311 aa15.77■□□□□ 0.12
LINC00880-201ENST00000471357 LTBP4Q8N2S1 1624 aa15.76■□□□□ 0.11
LINC00880-201ENST00000471357 GCP02774 474 aa15.76■□□□□ 0.11
LINC00880-201ENST00000471357 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
LINC00880-201ENST00000471357 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
LINC00880-201ENST00000471357 USP19O94966 1318 aa15.76■□□□□ 0.11
LINC00880-201ENST00000471357 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
LINC00880-201ENST00000471357 IQSEC2Q5JU85 1478 aa15.76■□□□□ 0.11
LINC00880-201ENST00000471357 PXDNQ92626 1479 aa15.76■□□□□ 0.11
LINC00880-201ENST00000471357 HOXC9P31274 260 aa15.75■□□□□ 0.11
LINC00880-201ENST00000471357 CDCA7LQ96GN5 454 aa15.75■□□□□ 0.11
LINC00880-201ENST00000471357 SLIT3O75094 1523 aa15.75■□□□□ 0.11
LINC00880-201ENST00000471357 ALS2Q96Q42 1657 aa15.75■□□□□ 0.11
LINC00880-201ENST00000471357 HMOX1P09601 288 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms