RNA–Protein interactions for RNA: ENST00000471292.5

NDUFA3-210, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-210ENST00000471292 RBM33Q96EV2 1170 aaKnown RBP15.14■□□□□ 0.01
NDUFA3-210ENST00000471292 USP6P35125 1406 aa15.13■□□□□ 0.01
NDUFA3-210ENST00000471292 SSH2Q76I76 1423 aa15.13■□□□□ 0.01
NDUFA3-210ENST00000471292 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
NDUFA3-210ENST00000471292 INSRP06213 1382 aa15.12■□□□□ 0.01
NDUFA3-210ENST00000471292 C14orf37Q86TY3 774 aa15.11■□□□□ 0.01
NDUFA3-210ENST00000471292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.11■□□□□ 0.01
NDUFA3-210ENST00000471292 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
NDUFA3-210ENST00000471292 RGPD8O14715 1765 aaPredicted RBP15.11■□□□□ 0.01
NDUFA3-210ENST00000471292 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
NDUFA3-210ENST00000471292 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
NDUFA3-210ENST00000471292 C19orf44Q9H6X5 657 aa15.1■□□□□ 0.01
NDUFA3-210ENST00000471292 DCCP43146 1447 aa15.09■□□□□ 0.01
NDUFA3-210ENST00000471292 NME9Q86XW9 330 aa15.09■□□□□ 0.01
NDUFA3-210ENST00000471292 PMFBP1Q8TBY8 1022 aa15.09■□□□□ 0.01
NDUFA3-210ENST00000471292 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
NDUFA3-210ENST00000471292 NGDNQ8NEJ9 315 aaKnown RBP15.08■□□□□ 0
NDUFA3-210ENST00000471292 PHF8Q9UPP1 1060 aa15.08■□□□□ 0
NDUFA3-210ENST00000471292 TTC21AQ8NDW8 1320 aa15.07■□□□□ 0
NDUFA3-210ENST00000471292 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
NDUFA3-210ENST00000471292 MTHFSP49914 203 aa15.06■□□□□ 0
NDUFA3-210ENST00000471292 OVOS2A0A0J9YW53 1432 aa15.06■□□□□ 0
NDUFA3-210ENST00000471292 OVOS2Q6IE36 1432 aa15.06■□□□□ 0
NDUFA3-210ENST00000471292 LRRC7Q96NW7 1537 aa15.06■□□□□ 0
NDUFA3-210ENST00000471292 COG3Q96JB2 828 aa15.05■□□□□ -0
NDUFA3-210ENST00000471292 ZRANB1Q9UGI0 708 aa15.05■□□□□ -0
NDUFA3-210ENST00000471292 AATKQ6ZMQ8 1374 aa15.05■□□□□ -0
NDUFA3-210ENST00000471292 C1orf167Q5SNV9 1468 aa15.05■□□□□ -0
NDUFA3-210ENST00000471292 MST1RQ04912 1400 aa15.04■□□□□ -0
NDUFA3-210ENST00000471292 USP31Q70CQ4 1352 aa15.04■□□□□ -0
NDUFA3-210ENST00000471292 ZBED9Q6R2W3 1325 aa15.04■□□□□ -0
NDUFA3-210ENST00000471292 WDR43Q15061 677 aaKnown RBP eCLIP15.04■□□□□ -0
NDUFA3-210ENST00000471292 CFAP53Q96M91 514 aa15.04■□□□□ -0
NDUFA3-210ENST00000471292 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
NDUFA3-210ENST00000471292 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
NDUFA3-210ENST00000471292 ATF3P18847 181 aa15.03■□□□□ -0
NDUFA3-210ENST00000471292 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
NDUFA3-210ENST00000471292 ADAMTS8Q9UP79 889 aa15.03■□□□□ -0
NDUFA3-210ENST00000471292 XIRP1Q702N8 1843 aaKnown RBP15.03■□□□□ -0
NDUFA3-210ENST00000471292 SHPRHQ149N8 1683 aa15.03■□□□□ -0
NDUFA3-210ENST00000471292 MSH6P52701 1360 aa15.02■□□□□ -0
NDUFA3-210ENST00000471292 PNPLA6Q8IY17 1366 aa15.02■□□□□ -0
NDUFA3-210ENST00000471292 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
NDUFA3-210ENST00000471292 PIK3C2AO00443 1686 aa15.01□□□□□ -0.01
NDUFA3-210ENST00000471292 USP54Q70EL1 1684 aa15.01□□□□□ -0.01
NDUFA3-210ENST00000471292 CADPS2Q86UW7 1296 aa15.01□□□□□ -0.01
NDUFA3-210ENST00000471292 POLKQ9UBT6 870 aa15.01□□□□□ -0.01
NDUFA3-210ENST00000471292 MED1Q15648 1581 aaPredicted RBP15.01□□□□□ -0.01
NDUFA3-210ENST00000471292 ORAI2Q96SN7 254 aa15□□□□□ -0.01
NDUFA3-210ENST00000471292 CDK12Q9NYV4 1490 aaPredicted RBP14.98□□□□□ -0.01
NDUFA3-210ENST00000471292 FBLN1P23142 703 aa14.97□□□□□ -0.01
NDUFA3-210ENST00000471292 PSME1Q06323 249 aa14.97□□□□□ -0.01
NDUFA3-210ENST00000471292 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
NDUFA3-210ENST00000471292 EMILIN1Q9Y6C2 1016 aa14.96□□□□□ -0.01
NDUFA3-210ENST00000471292 FOXO3O43524 673 aa14.95□□□□□ -0.02
NDUFA3-210ENST00000471292 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
NDUFA3-210ENST00000471292 DIAPH1O60610 1272 aaKnown RBP14.94□□□□□ -0.02
NDUFA3-210ENST00000471292 NLRP6P59044 892 aa14.94□□□□□ -0.02
NDUFA3-210ENST00000471292 ABTB2Q8N961 1025 aa14.94□□□□□ -0.02
NDUFA3-210ENST00000471292 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
NDUFA3-210ENST00000471292 MAP2P11137 1827 aaKnown RBP14.94□□□□□ -0.02
NDUFA3-210ENST00000471292 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
NDUFA3-210ENST00000471292 RRS1Q15050 365 aaKnown RBP14.93□□□□□ -0.02
NDUFA3-210ENST00000471292 KRT28Q7Z3Y7 464 aa14.93□□□□□ -0.02
NDUFA3-210ENST00000471292 RGS17Q9UGC6 210 aaPredicted RBP14.93□□□□□ -0.02
NDUFA3-210ENST00000471292 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
NDUFA3-210ENST00000471292 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
NDUFA3-210ENST00000471292 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
NDUFA3-210ENST00000471292 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
NDUFA3-210ENST00000471292 PEAK1Q9H792 1746 aa14.91□□□□□ -0.02
NDUFA3-210ENST00000471292 NPHP3Q7Z494 1330 aa14.91□□□□□ -0.02
NDUFA3-210ENST00000471292 SBNO1A3KN83 1393 aa14.9□□□□□ -0.02
NDUFA3-210ENST00000471292 KIF24Q5T7B8 1368 aa14.9□□□□□ -0.02
NDUFA3-210ENST00000471292 IL13P35225 146 aa14.9□□□□□ -0.02
NDUFA3-210ENST00000471292 NUTM2GQ5VZR2 741 aa14.9□□□□□ -0.02
NDUFA3-210ENST00000471292 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
NDUFA3-210ENST00000471292 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
NDUFA3-210ENST00000471292 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
NDUFA3-210ENST00000471292 PXDNQ92626 1479 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 SLIT3O75094 1523 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 NFAT5O94916 1531 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 SENP3-EIF4A1A0A087X0R7 540 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 XPCQ01831 940 aaPredicted RBP14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 NGEFQ8N5V2 710 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 SLAIN2Q9P270 581 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 USP19O94966 1318 aa14.89□□□□□ -0.03
NDUFA3-210ENST00000471292 ALS2Q96Q42 1657 aa14.88□□□□□ -0.03
NDUFA3-210ENST00000471292 APAF1O14727 1248 aa14.88□□□□□ -0.03
NDUFA3-210ENST00000471292 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
NDUFA3-210ENST00000471292 FLT4P35916 1363 aa14.87□□□□□ -0.03
NDUFA3-210ENST00000471292 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
NDUFA3-210ENST00000471292 ZNF521Q96K83 1311 aa14.87□□□□□ -0.03
NDUFA3-210ENST00000471292 RTL1A6NKG5 1358 aa14.86□□□□□ -0.03
NDUFA3-210ENST00000471292 SOX12O15370 315 aa14.86□□□□□ -0.03
NDUFA3-210ENST00000471292 POTEAQ6S8J7 498 aa14.86□□□□□ -0.03
NDUFA3-210ENST00000471292 KCNH5Q8NCM2 988 aa14.86□□□□□ -0.03
NDUFA3-210ENST00000471292 PLEKHF1Q96S99 279 aa14.86□□□□□ -0.03
NDUFA3-210ENST00000471292 SALL2Q9Y467 1007 aaPredicted RBP14.86□□□□□ -0.03
NDUFA3-210ENST00000471292 TNS3Q68CZ2 1445 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms