RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
PTPRE-207ENST00000471218 ANP32CO43423 234 aa12.6□□□□□ -0.39
PTPRE-207ENST00000471218 KRT27Q7Z3Y8 459 aa12.6□□□□□ -0.39
PTPRE-207ENST00000471218 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
PTPRE-207ENST00000471218 POGKQ9P215 609 aa12.6□□□□□ -0.39
PTPRE-207ENST00000471218 TNS3Q68CZ2 1445 aa12.6□□□□□ -0.39
PTPRE-207ENST00000471218 BAG6P46379 1132 aa12.59□□□□□ -0.39
PTPRE-207ENST00000471218 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
PTPRE-207ENST00000471218 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
PTPRE-207ENST00000471218 C11orf95C9JLR9 678 aaPredicted RBP12.58□□□□□ -0.4
PTPRE-207ENST00000471218 MIER1Q8N108 512 aa12.58□□□□□ -0.4
PTPRE-207ENST00000471218 KNDC1Q76NI1 1749 aa12.57□□□□□ -0.4
PTPRE-207ENST00000471218 ANKARQ7Z5J8 1434 aa12.57□□□□□ -0.4
PTPRE-207ENST00000471218 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
PTPRE-207ENST00000471218 A0A0G2JS52 829 aa12.56□□□□□ -0.4
PTPRE-207ENST00000471218 MYT1Q01538 1121 aa12.56□□□□□ -0.4
PTPRE-207ENST00000471218 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
PTPRE-207ENST00000471218 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
PTPRE-207ENST00000471218 FMN2Q9NZ56 1722 aa12.55□□□□□ -0.4
PTPRE-207ENST00000471218 USP32Q8NFA0 1604 aa12.55□□□□□ -0.4
PTPRE-207ENST00000471218 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
PTPRE-207ENST00000471218 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
PTPRE-207ENST00000471218 DEFB132Q7Z7B7 95 aa12.53□□□□□ -0.4
PTPRE-207ENST00000471218 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
PTPRE-207ENST00000471218 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
PTPRE-207ENST00000471218 NWD2Q9ULI1 1742 aa12.53□□□□□ -0.4
PTPRE-207ENST00000471218 GLI3P10071 1580 aa12.52□□□□□ -0.4
PTPRE-207ENST00000471218 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
PTPRE-207ENST00000471218 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
PTPRE-207ENST00000471218 SAFB2Q14151 953 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTPRE-207ENST00000471218 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
PTPRE-207ENST00000471218 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
PTPRE-207ENST00000471218 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
PTPRE-207ENST00000471218 QRICH2Q9H0J4 1663 aa12.5□□□□□ -0.41
PTPRE-207ENST00000471218 WASLO00401 505 aaPredicted RBP12.49□□□□□ -0.41
PTPRE-207ENST00000471218 RALBP1Q15311 655 aa12.49□□□□□ -0.41
PTPRE-207ENST00000471218 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
PTPRE-207ENST00000471218 TRAK1Q9UPV9 953 aa12.49□□□□□ -0.41
PTPRE-207ENST00000471218 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
PTPRE-207ENST00000471218 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
PTPRE-207ENST00000471218 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
PTPRE-207ENST00000471218 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
PTPRE-207ENST00000471218 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
PTPRE-207ENST00000471218 PRDM11Q9NQV5 511 aa12.48□□□□□ -0.41
PTPRE-207ENST00000471218 PARD3Q8TEW0 1356 aa12.46□□□□□ -0.41
PTPRE-207ENST00000471218 PER1O15534 1290 aaPredicted RBP12.46□□□□□ -0.41
PTPRE-207ENST00000471218 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
PTPRE-207ENST00000471218 ADGRB2O60241 1585 aa12.45□□□□□ -0.42
PTPRE-207ENST00000471218 EVA1CP58658 441 aa12.45□□□□□ -0.42
PTPRE-207ENST00000471218 BRWD3Q6RI45 1802 aa12.45□□□□□ -0.42
PTPRE-207ENST00000471218 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
PTPRE-207ENST00000471218 COL14A1Q05707 1796 aaKnown RBP12.45□□□□□ -0.42
PTPRE-207ENST00000471218 PLCH1Q4KWH8 1693 aa12.45□□□□□ -0.42
PTPRE-207ENST00000471218 LRP5O75197 1615 aa12.44□□□□□ -0.42
PTPRE-207ENST00000471218 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
PTPRE-207ENST00000471218 EN1Q05925 392 aaPredicted RBP12.44□□□□□ -0.42
PTPRE-207ENST00000471218 DISP2A7MBM2 1401 aa12.44□□□□□ -0.42
PTPRE-207ENST00000471218 MYOM1P52179 1685 aa12.43□□□□□ -0.42
PTPRE-207ENST00000471218 CENPBP07199 599 aaPredicted RBP12.43□□□□□ -0.42
PTPRE-207ENST00000471218 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
PTPRE-207ENST00000471218 NBPF14Q5TI25 921 aa12.43□□□□□ -0.42
PTPRE-207ENST00000471218 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
PTPRE-207ENST00000471218 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
PTPRE-207ENST00000471218 NSD2O96028 1365 aa12.43□□□□□ -0.42
PTPRE-207ENST00000471218 SPATA31A1Q5TZJ5 1347 aa12.42□□□□□ -0.42
PTPRE-207ENST00000471218 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
PTPRE-207ENST00000471218 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
PTPRE-207ENST00000471218 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
PTPRE-207ENST00000471218 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
PTPRE-207ENST00000471218 PANK3Q9H999 370 aa12.42□□□□□ -0.42
PTPRE-207ENST00000471218 THRAP3Q9Y2W1 955 aaKnown RBP12.42□□□□□ -0.42
PTPRE-207ENST00000471218 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
PTPRE-207ENST00000471218 INSRP06213 1382 aa12.42□□□□□ -0.42
PTPRE-207ENST00000471218 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
PTPRE-207ENST00000471218 MYBBP1AQ9BQG0 1328 aaKnown RBP12.41□□□□□ -0.42
PTPRE-207ENST00000471218 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
PTPRE-207ENST00000471218 ATP7BP35670 1465 aa12.4□□□□□ -0.42
PTPRE-207ENST00000471218 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
PTPRE-207ENST00000471218 APBA3O96018 575 aa12.4□□□□□ -0.42
PTPRE-207ENST00000471218 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
PTPRE-207ENST00000471218 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
PTPRE-207ENST00000471218 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.43
PTPRE-207ENST00000471218 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
PTPRE-207ENST00000471218 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-207ENST00000471218 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
PTPRE-207ENST00000471218 CDK19Q9BWU1 502 aa12.39□□□□□ -0.43
PTPRE-207ENST00000471218 STRN4Q9NRL3 753 aa12.39□□□□□ -0.43
PTPRE-207ENST00000471218 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
PTPRE-207ENST00000471218 ABCA3Q99758 1704 aa12.39□□□□□ -0.43
PTPRE-207ENST00000471218 ALS2Q96Q42 1657 aa12.38□□□□□ -0.43
PTPRE-207ENST00000471218 TRPM3Q9HCF6 1732 aaPredicted RBP12.38□□□□□ -0.43
PTPRE-207ENST00000471218 TRIM37O94972 964 aa12.38□□□□□ -0.43
PTPRE-207ENST00000471218 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
PTPRE-207ENST00000471218 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
PTPRE-207ENST00000471218 TERF2IPQ9NYB0 399 aa12.38□□□□□ -0.43
PTPRE-207ENST00000471218 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
PTPRE-207ENST00000471218 ZC3H6P61129 1189 aaKnown RBP12.37□□□□□ -0.43
PTPRE-207ENST00000471218 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
PTPRE-207ENST00000471218 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
PTPRE-207ENST00000471218 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms