RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 NUCB2P80303 420 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 JAKMIP3Q5VZ66 844 aa8.19□□□□□ -1.1
BRCA1-210ENST00000471181 CHMP4BP1P59074 171 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 SMC1AQ14683 1233 aaKnown RBP8.18□□□□□ -1.1
BRCA1-210ENST00000471181 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 PKD2Q13563 968 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 ERC2O15083 957 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 AIMP1Q12904 312 aaKnown RBP8.18□□□□□ -1.1
BRCA1-210ENST00000471181 CFAP57Q96MR6 1250 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 CRBNQ96SW2 442 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 ZWINTO95229 277 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 TXLNBQ8N3L3 684 aa8.18□□□□□ -1.1
BRCA1-210ENST00000471181 SLC3A2P08195 630 aaKnown RBP8.17□□□□□ -1.1
BRCA1-210ENST00000471181 CCDC175P0C221 793 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 LETM1O95202 739 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-210ENST00000471181 FKBP5Q13451 457 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-210ENST00000471181 TAF4BQ92750 862 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 HOMER2Q9NSB8 354 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 SSBP05455 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
BRCA1-210ENST00000471181 STIM1Q13586 685 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 BMS1Q14692 1282 aaKnown RBP8.17□□□□□ -1.1
BRCA1-210ENST00000471181 IQCEQ6IPM2 695 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 PLCD3Q8N3E9 789 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 GPATCH11Q8N954 259 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 COG3Q96JB2 828 aa8.17□□□□□ -1.1
BRCA1-210ENST00000471181 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-210ENST00000471181 STK38Q15208 465 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 TRIM21P19474 475 aaKnown RBP8.16□□□□□ -1.1
BRCA1-210ENST00000471181 CAVIN1Q6NZI2 390 aaKnown RBP8.16□□□□□ -1.1
BRCA1-210ENST00000471181 RIC3Q7Z5B4 369 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 FSD1Q9BTV5 496 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 LAMC3Q9Y6N6 1575 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 TMCO5BA8MYB1 307 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 PSMA5P28066 241 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 MPNDQ8N594 471 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 EPB41L2O43491 1005 aaKnown RBP8.16□□□□□ -1.1
BRCA1-210ENST00000471181 TBC1D2BQ9UPU7 963 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 NINLQ9Y2I6 1382 aa8.16□□□□□ -1.1
BRCA1-210ENST00000471181 ZNF396Q96N95 335 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-210ENST00000471181 NFKBIBQ15653 356 aa8.15□□□□□ -1.1
BRCA1-210ENST00000471181 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
BRCA1-210ENST00000471181 EXOC6Q8TAG9 804 aa8.15□□□□□ -1.1
BRCA1-210ENST00000471181 SCLT1Q96NL6 688 aa8.15□□□□□ -1.1
BRCA1-210ENST00000471181 SHTN1A0MZ66 631 aa8.15□□□□□ -1.1
BRCA1-210ENST00000471181 ANKRD18BA2A2Z9 1011 aa8.15□□□□□ -1.1
BRCA1-210ENST00000471181 RBM5P52756 815 aaKnown RBP eCLIP8.15□□□□□ -1.1
BRCA1-210ENST00000471181 KIAA1328Q86T90 577 aa8.15□□□□□ -1.1
BRCA1-210ENST00000471181 RNF187Q5TA31 235 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-210ENST00000471181 PABPN1LA6NDY0 278 aaKnown RBP8.14□□□□□ -1.11
BRCA1-210ENST00000471181 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
BRCA1-210ENST00000471181 IPO4Q8TEX9 1081 aaKnown RBP8.14□□□□□ -1.11
BRCA1-210ENST00000471181 DACH1Q9UI36 760 aa8.14□□□□□ -1.11
BRCA1-210ENST00000471181 CFTRP13569 1480 aa8.14□□□□□ -1.11
BRCA1-210ENST00000471181 TMCO3Q6UWJ1 677 aa8.14□□□□□ -1.11
BRCA1-210ENST00000471181 CTNNBL1Q8WYA6 563 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-210ENST00000471181 POTEJP0CG39 1038 aa8.14□□□□□ -1.11
BRCA1-210ENST00000471181 MYCNP04198 464 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-210ENST00000471181 ZNF76P36508 570 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 ERC1Q8IUD2 1116 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 TIGD1Q96MW7 591 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 KIF7Q2M1P5 1343 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 TNNT1P13805 278 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 FERP16591 822 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 CBX1P83916 185 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 ZNF526Q8TF50 670 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-210ENST00000471181 ROCK1Q13464 1354 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 GSTTP1A0A1W2PQM5 241 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 FIBPO43427 364 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 PRPF40AO75400 957 aaKnown RBP8.13□□□□□ -1.11
BRCA1-210ENST00000471181 MRE11P49959 708 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 STK3Q13188 491 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 CCDC178Q5BJE1 867 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 FEZ1Q99689 392 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 MRPS9P82933 396 aaKnown RBP8.13□□□□□ -1.11
BRCA1-210ENST00000471181 TTC39AQ5SRH9 613 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 DDX19BQ9UMR2 479 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 CNTROBQ8N137 903 aa8.13□□□□□ -1.11
BRCA1-210ENST00000471181 AEBP2Q6ZN18 517 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-210ENST00000471181 APBB1IPQ7Z5R6 666 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-210ENST00000471181 NUP133Q8WUM0 1156 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 IFFO1Q0D2I5 559 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 BAZ1BQ9UIG0 1483 aaKnown RBP8.12□□□□□ -1.11
BRCA1-210ENST00000471181 CEP162Q5TB80 1403 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 CLGNO14967 610 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 GOLGA3Q08378 1498 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 WASHC2AQ641Q2 1341 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 UQCRHLA0A096LP55 91 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 CBFA2T2O43439 604 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 UQCRHP07919 91 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 CETN2P41208 172 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 CCDC148Q8NFR7 591 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 C22orf23Q9BZE7 217 aa8.12□□□□□ -1.11
BRCA1-210ENST00000471181 PIBF1Q8WXW3 757 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 LNPKQ9C0E8 428 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 DNAI2Q9GZS0 605 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 CCDC69A6NI79 296 aa8.11□□□□□ -1.11
BRCA1-210ENST00000471181 EIF5P55010 431 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms