RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 CTHP32929 405 aa7.42□□□□□ -1.22
PRPF3-204ENST00000470824 NR1H3Q13133 447 aa7.42□□□□□ -1.22
PRPF3-204ENST00000470824 PPP1R12CQ9BZL4 782 aa7.42□□□□□ -1.22
PRPF3-204ENST00000470824 ZC3H4Q9UPT8 1303 aaKnown RBP7.42□□□□□ -1.22
PRPF3-204ENST00000470824 ZBBXA8MT70 800 aa7.41□□□□□ -1.22
PRPF3-204ENST00000470824 DXOO77932 396 aaKnown RBP7.41□□□□□ -1.22
PRPF3-204ENST00000470824 CCNYL3P0C7X3 344 aa7.41□□□□□ -1.22
PRPF3-204ENST00000470824 FAM160A2Q8N612 972 aaPredicted RBP7.41□□□□□ -1.22
PRPF3-204ENST00000470824 ARMC2Q8NEN0 867 aa7.41□□□□□ -1.22
PRPF3-204ENST00000470824 EVA1BQ9NVM1 165 aa7.41□□□□□ -1.22
PRPF3-204ENST00000470824 MAP10Q9P2G4 905 aa7.41□□□□□ -1.22
PRPF3-204ENST00000470824 RFX1P22670 979 aa7.4□□□□□ -1.22
PRPF3-204ENST00000470824 MMP16P51512 607 aa7.4□□□□□ -1.22
PRPF3-204ENST00000470824 TRIM26Q12899 539 aaPredicted RBP7.4□□□□□ -1.22
PRPF3-204ENST00000470824 PBXIP1Q96AQ6 731 aa7.4□□□□□ -1.22
PRPF3-204ENST00000470824 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
PRPF3-204ENST00000470824 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
PRPF3-204ENST00000470824 IRX2Q9BZI1 471 aaPredicted RBP7.4□□□□□ -1.22
PRPF3-204ENST00000470824 A0A0G2JS52 829 aa7.39□□□□□ -1.23
PRPF3-204ENST00000470824 PALM3A6NDB9 673 aaPredicted RBP7.39□□□□□ -1.23
PRPF3-204ENST00000470824 ZPR1O75312 459 aa7.39□□□□□ -1.23
PRPF3-204ENST00000470824 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
PRPF3-204ENST00000470824 PDE4CQ08493 712 aa7.39□□□□□ -1.23
PRPF3-204ENST00000470824 KCNH2Q12809 1159 aa7.39□□□□□ -1.23
PRPF3-204ENST00000470824 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
PRPF3-204ENST00000470824 ADH1BP00325 375 aa7.38□□□□□ -1.23
PRPF3-204ENST00000470824 CFAP70Q5T0N1 1121 aa7.38□□□□□ -1.23
PRPF3-204ENST00000470824 GPKOWQ92917 476 aaPredicted RBP eCLIP7.38□□□□□ -1.23
PRPF3-204ENST00000470824 TFIP11Q9UBB9 837 aaKnown RBP7.38□□□□□ -1.23
PRPF3-204ENST00000470824 LMOD1P29536 600 aaPredicted RBP7.37□□□□□ -1.23
PRPF3-204ENST00000470824 PTK2Q05397 1052 aa7.37□□□□□ -1.23
PRPF3-204ENST00000470824 IFFO2Q5TF58 517 aa7.37□□□□□ -1.23
PRPF3-204ENST00000470824 PDXDC2PQ6P474 469 aa7.37□□□□□ -1.23
PRPF3-204ENST00000470824 RETREG2Q8NC44 543 aa7.37□□□□□ -1.23
PRPF3-204ENST00000470824 MTRQ99707 1265 aa7.37□□□□□ -1.23
PRPF3-204ENST00000470824 GPSM3Q9Y4H4 160 aa7.37□□□□□ -1.23
PRPF3-204ENST00000470824 ZBTB7CA1YPR0 619 aa7.36□□□□□ -1.23
PRPF3-204ENST00000470824 RGS20O76081 388 aa7.36□□□□□ -1.23
PRPF3-204ENST00000470824 NBPF14Q5TI25 921 aa7.36□□□□□ -1.23
PRPF3-204ENST00000470824 ZNF592Q92610 1267 aa7.36□□□□□ -1.23
PRPF3-204ENST00000470824 UCN2Q96RP3 112 aa7.36□□□□□ -1.23
PRPF3-204ENST00000470824 IL21Q9HBE4 155 aa7.36□□□□□ -1.23
PRPF3-204ENST00000470824 PRDM9Q9NQV7 894 aa7.36□□□□□ -1.23
PRPF3-204ENST00000470824 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.35□□□□□ -1.23
PRPF3-204ENST00000470824 TLL1O43897 1013 aa7.35□□□□□ -1.23
PRPF3-204ENST00000470824 MCCD1P59942 119 aaPredicted RBP7.35□□□□□ -1.23
PRPF3-204ENST00000470824 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
PRPF3-204ENST00000470824 KCTD17Q8N5Z5 321 aa7.35□□□□□ -1.23
PRPF3-204ENST00000470824 TJAP1Q5JTD0 557 aa7.34□□□□□ -1.23
PRPF3-204ENST00000470824 TBC1D9Q6ZT07 1266 aa7.34□□□□□ -1.23
PRPF3-204ENST00000470824 CCDC24Q8N4L8 307 aa7.34□□□□□ -1.23
PRPF3-204ENST00000470824 SLC6A16Q9GZN6 736 aa7.34□□□□□ -1.23
PRPF3-204ENST00000470824 MAFBQ9Y5Q3 323 aaPredicted RBP7.34□□□□□ -1.23
PRPF3-204ENST00000470824 ATP9BO43861 1147 aa7.33□□□□□ -1.24
PRPF3-204ENST00000470824 NFATC2IPQ8NCF5 419 aa7.33□□□□□ -1.24
PRPF3-204ENST00000470824 ZNF516Q92618 1163 aa7.33□□□□□ -1.24
PRPF3-204ENST00000470824 CSB-PGBD3P0DP91 1061 aa7.32□□□□□ -1.24
PRPF3-204ENST00000470824 UNC93B1Q9H1C4 597 aa7.32□□□□□ -1.24
PRPF3-204ENST00000470824 PTCRAQ6ISU1 281 aaPredicted RBP7.31□□□□□ -1.24
PRPF3-204ENST00000470824 ARHGAP9Q9BRR9 750 aa7.31□□□□□ -1.24
PRPF3-204ENST00000470824 PCDHB9Q9Y5E1 797 aa7.31□□□□□ -1.24
PRPF3-204ENST00000470824 SKIP12755 728 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 SLFNL1Q499Z3 407 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 CDCA8Q53HL2 280 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 ZBTB33Q86T24 672 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 ADAM32Q8TC27 787 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 VRTNQ9H8Y1 702 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 CEP126Q9P2H0 1117 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 USTQ9Y2C2 406 aa7.3□□□□□ -1.24
PRPF3-204ENST00000470824 PIK3CDO00329 1044 aa7.29□□□□□ -1.24
PRPF3-204ENST00000470824 ATG7O95352 703 aa7.29□□□□□ -1.24
PRPF3-204ENST00000470824 AEBP1Q8IUX7 1158 aa7.29□□□□□ -1.24
PRPF3-204ENST00000470824 OCSTAMPQ9BR26 566 aa7.29□□□□□ -1.24
PRPF3-204ENST00000470824 ITGBL1O95965 494 aaPredicted RBP7.28□□□□□ -1.24
PRPF3-204ENST00000470824 S1PR4O95977 384 aa7.28□□□□□ -1.24
PRPF3-204ENST00000470824 SH3BP5LQ7L8J4 393 aa7.28□□□□□ -1.24
PRPF3-204ENST00000470824 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
PRPF3-204ENST00000470824 BPHLQ86WA6 291 aaPredicted RBP7.27□□□□□ -1.25
PRPF3-204ENST00000470824 DZIP3Q86Y13 1208 aaKnown RBP7.27□□□□□ -1.25
PRPF3-204ENST00000470824 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
PRPF3-204ENST00000470824 PLEKHM2Q8IWE5 1019 aa7.27□□□□□ -1.25
PRPF3-204ENST00000470824 NKX2-3Q8TAU0 364 aa7.27□□□□□ -1.25
PRPF3-204ENST00000470824 FCF1Q9Y324 198 aaKnown RBP7.27□□□□□ -1.25
PRPF3-204ENST00000470824 USP17L3A6NCW0 530 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 USP17L4A6NCW7 530 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 LZTS3O60299 673 aaPredicted RBP7.26□□□□□ -1.25
PRPF3-204ENST00000470824 AGERQ15109 404 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
PRPF3-204ENST00000470824 USP17L2Q6R6M4 530 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 Q6ZNB5 142 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 USP17L1Q7RTZ2 530 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 FAM174AQ8TBP5 190 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 BAP1Q92560 729 aa7.26□□□□□ -1.25
PRPF3-204ENST00000470824 MAGEB6P1A0A0J9YX57 407 aa7.25□□□□□ -1.25
PRPF3-204ENST00000470824 KCNC4Q03721 635 aa7.25□□□□□ -1.25
PRPF3-204ENST00000470824 SH3RF1Q7Z6J0 888 aa7.25□□□□□ -1.25
PRPF3-204ENST00000470824 PHTF2Q8N3S3 785 aa7.25□□□□□ -1.25
PRPF3-204ENST00000470824 CARD14Q9BXL6 1004 aa7.25□□□□□ -1.25
PRPF3-204ENST00000470824 PATL2C9JE40 543 aaKnown RBP7.24□□□□□ -1.25
PRPF3-204ENST00000470824 MAP7D1Q3KQU3 841 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms