RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	AKAP12	Q02952	1782 aa		11.78	□□□□□ -0.52
HDLBP-233	ENST00000470710	PPP2R1A	P30153	589 aa		11.78	□□□□□ -0.52
HDLBP-233	ENST00000470710	MRS2	Q9HD23	443 aa		11.78	□□□□□ -0.52
HDLBP-233	ENST00000470710	LTBP4	Q8N2S1	1624 aa		11.78	□□□□□ -0.52
HDLBP-233	ENST00000470710	CCDC184	Q52MB2	194 aa		11.77	□□□□□ -0.53
HDLBP-233	ENST00000470710	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
HDLBP-233	ENST00000470710	ORAI2	Q96SN7	254 aa		11.77	□□□□□ -0.53
HDLBP-233	ENST00000470710	GGNBP2	Q9H3C7	697 aa		11.77	□□□□□ -0.53
HDLBP-233	ENST00000470710	SCAF1	Q9H7N4	1312 aa	Known RBP	11.77	□□□□□ -0.53
HDLBP-233	ENST00000470710	NRK	Q7Z2Y5	1582 aa		11.76	□□□□□ -0.53
HDLBP-233	ENST00000470710	NME9	Q86XW9	330 aa		11.76	□□□□□ -0.53
HDLBP-233	ENST00000470710	XIRP1	Q702N8	1843 aa	Known RBP	11.76	□□□□□ -0.53
HDLBP-233	ENST00000470710	USP31	Q70CQ4	1352 aa		11.75	□□□□□ -0.53
HDLBP-233	ENST00000470710	KIF1A	Q12756	1690 aa		11.75	□□□□□ -0.53
HDLBP-233	ENST00000470710	COG3	Q96JB2	828 aa		11.74	□□□□□ -0.53
HDLBP-233	ENST00000470710	SLAIN2	Q9P270	581 aa		11.74	□□□□□ -0.53
HDLBP-233	ENST00000470710	OVOS2	A0A0J9YW53	1432 aa		11.74	□□□□□ -0.53
HDLBP-233	ENST00000470710	OVOS2	Q6IE36	1432 aa		11.74	□□□□□ -0.53
HDLBP-233	ENST00000470710	RGPD8	O14715	1765 aa	Predicted RBP	11.74	□□□□□ -0.53
HDLBP-233	ENST00000470710	PSME1	Q06323	249 aa		11.73	□□□□□ -0.53
HDLBP-233	ENST00000470710	AATK	Q6ZMQ8	1374 aa		11.73	□□□□□ -0.53
HDLBP-233	ENST00000470710	KIF20B	Q96Q89	1820 aa		11.72	□□□□□ -0.53
HDLBP-233	ENST00000470710	NPHP3	Q7Z494	1330 aa		11.72	□□□□□ -0.53
HDLBP-233	ENST00000470710	FOXO3	O43524	673 aa		11.72	□□□□□ -0.53
HDLBP-233	ENST00000470710	BRINP3	Q76B58	766 aa		11.72	□□□□□ -0.53
HDLBP-233	ENST00000470710	PNISR	Q8TF01	805 aa	Known RBP	11.72	□□□□□ -0.53
HDLBP-233	ENST00000470710	ANKRD26	Q9UPS8	1709 aa		11.72	□□□□□ -0.53
HDLBP-233	ENST00000470710	TNNT2	P45379	298 aa	Predicted RBP	11.71	□□□□□ -0.53
HDLBP-233	ENST00000470710	ZRANB1	Q9UGI0	708 aa		11.71	□□□□□ -0.53
HDLBP-233	ENST00000470710	SBNO1	A3KN83	1393 aa		11.7	□□□□□ -0.54
HDLBP-233	ENST00000470710	INSR	P06213	1382 aa		11.7	□□□□□ -0.54
HDLBP-233	ENST00000470710	MTHFS	P49914	203 aa		11.7	□□□□□ -0.54
HDLBP-233	ENST00000470710	KRT28	Q7Z3Y7	464 aa		11.7	□□□□□ -0.54
HDLBP-233	ENST00000470710	SMG6	Q86US8	1419 aa	Known RBP	11.69	□□□□□ -0.54
HDLBP-233	ENST00000470710	PAK3	O75914	559 aa	Predicted RBP	11.69	□□□□□ -0.54
HDLBP-233	ENST00000470710	NLRP6	P59044	892 aa		11.69	□□□□□ -0.54
HDLBP-233	ENST00000470710	ABTB2	Q8N961	1025 aa		11.69	□□□□□ -0.54
HDLBP-233	ENST00000470710	CFAP53	Q96M91	514 aa		11.69	□□□□□ -0.54
HDLBP-233	ENST00000470710	PNPLA6	Q8IY17	1366 aa		11.68	□□□□□ -0.54
HDLBP-233	ENST00000470710	POLK	Q9UBT6	870 aa		11.68	□□□□□ -0.54
HDLBP-233	ENST00000470710	PXDN	Q92626	1479 aa		11.68	□□□□□ -0.54
HDLBP-233	ENST00000470710	PIK3C2A	O00443	1686 aa		11.68	□□□□□ -0.54
HDLBP-233	ENST00000470710	USP54	Q70EL1	1684 aa		11.68	□□□□□ -0.54
HDLBP-233	ENST00000470710	XPC	Q01831	940 aa	Predicted RBP	11.67	□□□□□ -0.54
HDLBP-233	ENST00000470710	FAM9B	Q8IZU0	186 aa		11.67	□□□□□ -0.54
HDLBP-233	ENST00000470710	IQSEC2	Q5JU85	1478 aa		11.67	□□□□□ -0.54
HDLBP-233	ENST00000470710	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.66	□□□□□ -0.54
HDLBP-233	ENST00000470710	USP19	O94966	1318 aa		11.66	□□□□□ -0.54
HDLBP-233	ENST00000470710	SOS2	Q07890	1332 aa	Predicted RBP	11.66	□□□□□ -0.54
HDLBP-233	ENST00000470710	SPATA31A3	Q5VYP0	1347 aa		11.65	□□□□□ -0.54
HDLBP-233	ENST00000470710	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.65	□□□□□ -0.54
HDLBP-233	ENST00000470710	WDR43	Q15061	677 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
HDLBP-233	ENST00000470710	TNS3	Q68CZ2	1445 aa		11.65	□□□□□ -0.54
HDLBP-233	ENST00000470710	ARHGEF10	O15013	1369 aa		11.65	□□□□□ -0.55
HDLBP-233	ENST00000470710	COL3A1	P02461	1466 aa	Predicted RBP	11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	FBLN1	P23142	703 aa		11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	RRS1	Q15050	365 aa	Known RBP	11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	NUTM2G	Q5VZR2	741 aa		11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	KCNH5	Q8NCM2	988 aa		11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	DDX17	Q92841	729 aa	Known RBP	11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	YTHDC1	Q96MU7	727 aa	Known RBP	11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	EMILIN1	Q9Y6C2	1016 aa		11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	KIF24	Q5T7B8	1368 aa		11.64	□□□□□ -0.55
HDLBP-233	ENST00000470710	TOM1	O60784	492 aa		11.63	□□□□□ -0.55
HDLBP-233	ENST00000470710	SLIT3	O75094	1523 aa		11.63	□□□□□ -0.55
HDLBP-233	ENST00000470710	MAP3K19	Q56UN5	1328 aa		11.62	□□□□□ -0.55
HDLBP-233	ENST00000470710	ALS2	Q96Q42	1657 aa		11.62	□□□□□ -0.55
HDLBP-233	ENST00000470710	BLM	P54132	1417 aa	Predicted RBP	11.62	□□□□□ -0.55
HDLBP-233	ENST00000470710	NFAT5	O94916	1531 aa		11.62	□□□□□ -0.55
HDLBP-233	ENST00000470710	ADAMTS8	Q9UP79	889 aa		11.62	□□□□□ -0.55
HDLBP-233	ENST00000470710	NUDC	Q9Y266	331 aa		11.62	□□□□□ -0.55
HDLBP-233	ENST00000470710	MARF1	Q9Y4F3	1742 aa	Known RBP	11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	PPM1G	O15355	546 aa	Predicted RBP	11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	DIAPH1	O60610	1272 aa	Known RBP	11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	GC	P02774	474 aa		11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	LMOD2	Q6P5Q4	547 aa		11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	RTL1	A6NKG5	1358 aa		11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	FLT4	P35916	1363 aa		11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	MED1	Q15648	1581 aa	Predicted RBP	11.61	□□□□□ -0.55
HDLBP-233	ENST00000470710	NHSL1	Q5SYE7	1610 aa		11.6	□□□□□ -0.55
HDLBP-233	ENST00000470710	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.6	□□□□□ -0.55
HDLBP-233	ENST00000470710	SOX12	O15370	315 aa		11.6	□□□□□ -0.55
HDLBP-233	ENST00000470710	IL13	P35225	146 aa		11.6	□□□□□ -0.55
HDLBP-233	ENST00000470710	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
HDLBP-233	ENST00000470710	CERK	Q8TCT0	537 aa		11.6	□□□□□ -0.55
HDLBP-233	ENST00000470710	AMPH	P49418	695 aa		11.59	□□□□□ -0.55
HDLBP-233	ENST00000470710	SHPRH	Q149N8	1683 aa		11.59	□□□□□ -0.55
HDLBP-233	ENST00000470710	ROBO1	Q9Y6N7	1651 aa		11.59	□□□□□ -0.55
HDLBP-233	ENST00000470710	UBAP1L	F5GYI3	381 aa		11.58	□□□□□ -0.56
HDLBP-233	ENST00000470710	ARHGEF25	Q86VW2	580 aa		11.58	□□□□□ -0.56
HDLBP-233	ENST00000470710	CENPB	P07199	599 aa	Predicted RBP	11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	HOXC9	P31274	260 aa		11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	EIF4A2	Q14240	407 aa	Known RBP	11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	HSP90AB2P	Q58FF8	381 aa		11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	IP6K1	Q92551	441 aa		11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	LRRC59	Q96AG4	307 aa	Known RBP	11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	MAP2	P11137	1827 aa	Known RBP	11.57	□□□□□ -0.56
HDLBP-233	ENST00000470710	PEAK1	Q9H792	1746 aa		11.57	□□□□□ -0.56

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