RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
XRN1-208ENST00000470537 RGS12O14924 1447 aa13.4□□□□□ -0.26
XRN1-208ENST00000470537 ITGAEP38570 1179 aa13.4□□□□□ -0.26
XRN1-208ENST00000470537 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
XRN1-208ENST00000470537 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
XRN1-208ENST00000470537 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
XRN1-208ENST00000470537 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
XRN1-208ENST00000470537 C1orf167Q5SNV9 1468 aa13.39□□□□□ -0.27
XRN1-208ENST00000470537 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
XRN1-208ENST00000470537 RPGRIP1LQ68CZ1 1315 aa13.38□□□□□ -0.27
XRN1-208ENST00000470537 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
XRN1-208ENST00000470537 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
XRN1-208ENST00000470537 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
XRN1-208ENST00000470537 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
XRN1-208ENST00000470537 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
XRN1-208ENST00000470537 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
XRN1-208ENST00000470537 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
XRN1-208ENST00000470537 HFM1A2PYH4 1435 aa13.34□□□□□ -0.27
XRN1-208ENST00000470537 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
XRN1-208ENST00000470537 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
XRN1-208ENST00000470537 LAMC1P11047 1609 aa13.32□□□□□ -0.28
XRN1-208ENST00000470537 GSE1Q14687 1217 aa13.32□□□□□ -0.28
XRN1-208ENST00000470537 NALCNQ8IZF0 1738 aa13.32□□□□□ -0.28
XRN1-208ENST00000470537 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
XRN1-208ENST00000470537 KIF1BO60333 1816 aa13.32□□□□□ -0.28
XRN1-208ENST00000470537 ATRNO75882 1429 aa13.31□□□□□ -0.28
XRN1-208ENST00000470537 SF3B2Q13435 895 aaKnown RBP13.31□□□□□ -0.28
XRN1-208ENST00000470537 OCEL1Q9H607 264 aa13.31□□□□□ -0.28
XRN1-208ENST00000470537 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
XRN1-208ENST00000470537 EP400Q96L91 3159 aa13.3□□□□□ -0.28
XRN1-208ENST00000470537 FOXO3O43524 673 aa13.3□□□□□ -0.28
XRN1-208ENST00000470537 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
XRN1-208ENST00000470537 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
XRN1-208ENST00000470537 UNC5CLQ8IV45 518 aa13.28□□□□□ -0.28
XRN1-208ENST00000470537 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
XRN1-208ENST00000470537 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.29
XRN1-208ENST00000470537 CLTCL1P53675 1640 aa13.27□□□□□ -0.29
XRN1-208ENST00000470537 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
XRN1-208ENST00000470537 MYOM2P54296 1465 aa13.26□□□□□ -0.29
XRN1-208ENST00000470537 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
XRN1-208ENST00000470537 PSME1Q06323 249 aa13.25□□□□□ -0.29
XRN1-208ENST00000470537 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
XRN1-208ENST00000470537 CDC42BPGQ6DT37 1551 aa13.23□□□□□ -0.29
XRN1-208ENST00000470537 SPATA31A3Q5VYP0 1347 aa13.22□□□□□ -0.29
XRN1-208ENST00000470537 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
XRN1-208ENST00000470537 STK26Q9P289 416 aa13.22□□□□□ -0.29
XRN1-208ENST00000470537 PXDNQ92626 1479 aa13.22□□□□□ -0.29
XRN1-208ENST00000470537 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
XRN1-208ENST00000470537 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.29
XRN1-208ENST00000470537 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
XRN1-208ENST00000470537 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.3
XRN1-208ENST00000470537 NAIPQ13075 1403 aa13.21□□□□□ -0.3
XRN1-208ENST00000470537 ABCC11Q96J66 1382 aa13.2□□□□□ -0.3
XRN1-208ENST00000470537 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
XRN1-208ENST00000470537 ST18O60284 1047 aa13.2□□□□□ -0.3
XRN1-208ENST00000470537 VPS72Q15906 364 aa13.2□□□□□ -0.3
XRN1-208ENST00000470537 SEPT12Q8IYM1 358 aa13.2□□□□□ -0.3
XRN1-208ENST00000470537 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
XRN1-208ENST00000470537 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
XRN1-208ENST00000470537 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
XRN1-208ENST00000470537 RALGAPBQ86X10 1494 aa13.19□□□□□ -0.3
XRN1-208ENST00000470537 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
XRN1-208ENST00000470537 CHRM1P11229 460 aaPredicted RBP13.19□□□□□ -0.3
XRN1-208ENST00000470537 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
XRN1-208ENST00000470537 WAPLQ7Z5K2 1190 aa13.19□□□□□ -0.3
XRN1-208ENST00000470537 TECPR2O15040 1411 aa13.19□□□□□ -0.3
XRN1-208ENST00000470537 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
XRN1-208ENST00000470537 SLIT2O94813 1529 aa13.18□□□□□ -0.3
XRN1-208ENST00000470537 ACIN1Q9UKV3 1341 aaKnown RBP13.18□□□□□ -0.3
XRN1-208ENST00000470537 BAG6P46379 1132 aa13.18□□□□□ -0.3
XRN1-208ENST00000470537 RGL3Q3MIN7 710 aa13.18□□□□□ -0.3
XRN1-208ENST00000470537 KRT27Q7Z3Y8 459 aa13.18□□□□□ -0.3
XRN1-208ENST00000470537 PPARGC1BQ86YN6 1023 aaKnown RBP13.18□□□□□ -0.3
XRN1-208ENST00000470537 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
XRN1-208ENST00000470537 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
XRN1-208ENST00000470537 PPLO60437 1756 aa13.17□□□□□ -0.3
XRN1-208ENST00000470537 RRBP1Q9P2E9 1410 aaKnown RBP13.16□□□□□ -0.3
XRN1-208ENST00000470537 A0A0G2JS52 829 aa13.16□□□□□ -0.3
XRN1-208ENST00000470537 PSEN1P49768 467 aa13.16□□□□□ -0.3
XRN1-208ENST00000470537 MYT1Q01538 1121 aa13.16□□□□□ -0.3
XRN1-208ENST00000470537 LMOD2Q6P5Q4 547 aa13.16□□□□□ -0.3
XRN1-208ENST00000470537 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
XRN1-208ENST00000470537 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
XRN1-208ENST00000470537 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
XRN1-208ENST00000470537 KIF1AQ12756 1690 aa13.15□□□□□ -0.3
XRN1-208ENST00000470537 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
XRN1-208ENST00000470537 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
XRN1-208ENST00000470537 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
XRN1-208ENST00000470537 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
XRN1-208ENST00000470537 DHX57Q6P158 1386 aaKnown RBP13.13□□□□□ -0.31
XRN1-208ENST00000470537 GLI3P10071 1580 aa13.12□□□□□ -0.31
XRN1-208ENST00000470537 SNPHO15079 494 aa13.12□□□□□ -0.31
XRN1-208ENST00000470537 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
XRN1-208ENST00000470537 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
XRN1-208ENST00000470537 USP32Q8NFA0 1604 aa13.12□□□□□ -0.31
XRN1-208ENST00000470537 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
XRN1-208ENST00000470537 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
XRN1-208ENST00000470537 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
XRN1-208ENST00000470537 C14orf93Q9H972 538 aaKnown RBP13.11□□□□□ -0.31
XRN1-208ENST00000470537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.312e-7■■■■□ 19.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms