RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 ARHGEF10O15013 1369 aa9.64□□□□□ -0.87
PSMD4-210ENST00000470396 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
PSMD4-210ENST00000470396 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
PSMD4-210ENST00000470396 MON2Q7Z3U7 1717 aa9.64□□□□□ -0.87
PSMD4-210ENST00000470396 PIK3C2AO00443 1686 aa9.64□□□□□ -0.87
PSMD4-210ENST00000470396 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
PSMD4-210ENST00000470396 SLC12A5Q9H2X9 1139 aa9.63□□□□□ -0.87
PSMD4-210ENST00000470396 MYOM1P52179 1685 aa9.63□□□□□ -0.87
PSMD4-210ENST00000470396 PHRF1Q9P1Y6 1649 aaKnown RBP9.63□□□□□ -0.87
PSMD4-210ENST00000470396 EP400Q96L91 3159 aa9.62□□□□□ -0.87
PSMD4-210ENST00000470396 HSPA5P11021 654 aaKnown RBP9.62□□□□□ -0.87
PSMD4-210ENST00000470396 LMOD2Q6P5Q4 547 aa9.62□□□□□ -0.87
PSMD4-210ENST00000470396 C8orf37Q96NL8 207 aa9.62□□□□□ -0.87
PSMD4-210ENST00000470396 PUS7Q96PZ0 661 aaKnown RBP9.62□□□□□ -0.87
PSMD4-210ENST00000470396 AFF2P51816 1311 aa9.61□□□□□ -0.87
PSMD4-210ENST00000470396 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
PSMD4-210ENST00000470396 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
PSMD4-210ENST00000470396 MEX3CQ5U5Q3 659 aaKnown RBP9.61□□□□□ -0.87
PSMD4-210ENST00000470396 NUTM2GQ5VZR2 741 aa9.61□□□□□ -0.87
PSMD4-210ENST00000470396 A0A1W2PP64 1363 aa9.61□□□□□ -0.87
PSMD4-210ENST00000470396 BCL9LQ86UU0 1499 aa9.6□□□□□ -0.87
PSMD4-210ENST00000470396 USP19O94966 1318 aa9.6□□□□□ -0.87
PSMD4-210ENST00000470396 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
PSMD4-210ENST00000470396 PLCH1Q4KWH8 1693 aa9.6□□□□□ -0.87
PSMD4-210ENST00000470396 SLIT2O94813 1529 aa9.6□□□□□ -0.87
PSMD4-210ENST00000470396 BRD4O60885 1362 aaPredicted RBP9.6□□□□□ -0.87
PSMD4-210ENST00000470396 KTN1Q86UP2 1357 aaKnown RBP9.6□□□□□ -0.87
PSMD4-210ENST00000470396 TTC21BQ7Z4L5 1316 aa9.59□□□□□ -0.87
PSMD4-210ENST00000470396 C11orf95C9JLR9 678 aaPredicted RBP9.59□□□□□ -0.87
PSMD4-210ENST00000470396 EIF4G2P78344 907 aaKnown RBP eCLIP9.59□□□□□ -0.87
PSMD4-210ENST00000470396 TMF1P82094 1093 aa9.59□□□□□ -0.87
PSMD4-210ENST00000470396 TMC1Q8TDI8 760 aa9.59□□□□□ -0.87
PSMD4-210ENST00000470396 SLIT3O75094 1523 aa9.59□□□□□ -0.87
PSMD4-210ENST00000470396 USP54Q70EL1 1684 aa9.58□□□□□ -0.88
PSMD4-210ENST00000470396 FAM83GA6ND36 823 aa9.58□□□□□ -0.88
PSMD4-210ENST00000470396 ABTB2Q8N961 1025 aa9.58□□□□□ -0.88
PSMD4-210ENST00000470396 NGLY1Q96IV0 654 aa9.58□□□□□ -0.88
PSMD4-210ENST00000470396 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
PSMD4-210ENST00000470396 NRAPQ86VF7 1730 aa9.58□□□□□ -0.88
PSMD4-210ENST00000470396 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.58□□□□□ -0.88
PSMD4-210ENST00000470396 NINLQ9Y2I6 1382 aa9.58□□□□□ -0.88
PSMD4-210ENST00000470396 ATRNO75882 1429 aa9.57□□□□□ -0.88
PSMD4-210ENST00000470396 EDC4Q6P2E9 1401 aaKnown RBP9.57□□□□□ -0.88
PSMD4-210ENST00000470396 NWD2Q9ULI1 1742 aa9.57□□□□□ -0.88
PSMD4-210ENST00000470396 ZNF692Q9BU19 519 aaPredicted RBP9.57□□□□□ -0.88
PSMD4-210ENST00000470396 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
PSMD4-210ENST00000470396 NFAT5O94916 1531 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 COL14A1Q05707 1796 aaKnown RBP9.56□□□□□ -0.88
PSMD4-210ENST00000470396 LMO7Q8WWI1 1683 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 ANKRD36BQ8N2N9 1353 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 SLC24A1O60721 1099 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 ZNF772Q68DY9 489 aaPredicted RBP9.56□□□□□ -0.88
PSMD4-210ENST00000470396 NME9Q86XW9 330 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 USP21Q9UK80 565 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 OVOS2A0A0J9YW53 1432 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 OVOS2Q6IE36 1432 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 TTC21AQ8NDW8 1320 aa9.56□□□□□ -0.88
PSMD4-210ENST00000470396 GLI3P10071 1580 aa9.55□□□□□ -0.88
PSMD4-210ENST00000470396 CPDO75976 1380 aa9.55□□□□□ -0.88
PSMD4-210ENST00000470396 USP31Q70CQ4 1352 aa9.55□□□□□ -0.88
PSMD4-210ENST00000470396 GCP02774 474 aa9.55□□□□□ -0.88
PSMD4-210ENST00000470396 NLRP6P59044 892 aa9.55□□□□□ -0.88
PSMD4-210ENST00000470396 ZC3H6P61129 1189 aaKnown RBP9.55□□□□□ -0.88
PSMD4-210ENST00000470396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.55□□□□□ -0.88
PSMD4-210ENST00000470396 CARD14Q9BXL6 1004 aa9.55□□□□□ -0.88
PSMD4-210ENST00000470396 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
PSMD4-210ENST00000470396 COL18A1P39060 1754 aa9.55□□□□□ -0.88
PSMD4-210ENST00000470396 HAP1P54257 671 aaPredicted RBP9.54□□□□□ -0.88
PSMD4-210ENST00000470396 CHRNA2Q15822 529 aa9.54□□□□□ -0.88
PSMD4-210ENST00000470396 HDGFL2Q7Z4V5 671 aaPredicted RBP9.54□□□□□ -0.88
PSMD4-210ENST00000470396 NLRP13Q86W25 1043 aa9.54□□□□□ -0.88
PSMD4-210ENST00000470396 UNC5CLQ8IV45 518 aa9.54□□□□□ -0.88
PSMD4-210ENST00000470396 TERF2IPQ9NYB0 399 aa9.54□□□□□ -0.88
PSMD4-210ENST00000470396 CAMTA1Q9Y6Y1 1673 aa9.54□□□□□ -0.88
PSMD4-210ENST00000470396 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
PSMD4-210ENST00000470396 PRDM11Q9NQV5 511 aa9.53□□□□□ -0.88
PSMD4-210ENST00000470396 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
PSMD4-210ENST00000470396 RGS12O14924 1447 aa9.53□□□□□ -0.88
PSMD4-210ENST00000470396 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
PSMD4-210ENST00000470396 CDK12Q9NYV4 1490 aaPredicted RBP9.52□□□□□ -0.89
PSMD4-210ENST00000470396 KIF7Q2M1P5 1343 aa9.52□□□□□ -0.89
PSMD4-210ENST00000470396 NSD3Q9BZ95 1437 aa9.51□□□□□ -0.89
PSMD4-210ENST00000470396 RGPD5Q99666 1765 aa9.51□□□□□ -0.89
PSMD4-210ENST00000470396 FYB1O15117 783 aa9.51□□□□□ -0.89
PSMD4-210ENST00000470396 RXRBP28702 533 aa9.51□□□□□ -0.89
PSMD4-210ENST00000470396 RBM6P78332 1123 aaKnown RBP9.51□□□□□ -0.89
PSMD4-210ENST00000470396 VPS72Q15906 364 aa9.51□□□□□ -0.89
PSMD4-210ENST00000470396 ARHGEF25Q86VW2 580 aa9.51□□□□□ -0.89
PSMD4-210ENST00000470396 KIF20BQ96Q89 1820 aa9.51□□□□□ -0.89
PSMD4-210ENST00000470396 LTN1O94822 1766 aa9.5□□□□□ -0.89
PSMD4-210ENST00000470396 SOX12O15370 315 aa9.5□□□□□ -0.89
PSMD4-210ENST00000470396 FBLN1P23142 703 aa9.5□□□□□ -0.89
PSMD4-210ENST00000470396 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
PSMD4-210ENST00000470396 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
PSMD4-210ENST00000470396 COL5A2P05997 1499 aaPredicted RBP9.5□□□□□ -0.89
PSMD4-210ENST00000470396 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
PSMD4-210ENST00000470396 AATKQ6ZMQ8 1374 aa9.5□□□□□ -0.89
PSMD4-210ENST00000470396 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
PSMD4-210ENST00000470396 GGNBP2Q9H3C7 697 aa9.49□□□□□ -0.89
PSMD4-210ENST00000470396 BRWD3Q6RI45 1802 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms