RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
COL4A5-203ENST00000470339 TTC21AQ8NDW8 1320 aa20.43■□□□□ 0.86
COL4A5-203ENST00000470339 TTC21BQ7Z4L5 1316 aa20.42■□□□□ 0.86
COL4A5-203ENST00000470339 MST1RQ04912 1400 aa20.42■□□□□ 0.86
COL4A5-203ENST00000470339 ESCO1Q5FWF5 840 aa20.41■□□□□ 0.86
COL4A5-203ENST00000470339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.41■□□□□ 0.86
COL4A5-203ENST00000470339 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
COL4A5-203ENST00000470339 GGNBP2Q9H3C7 697 aa20.4■□□□□ 0.86
COL4A5-203ENST00000470339 PNISRQ8TF01 805 aaKnown RBP20.39■□□□□ 0.85
COL4A5-203ENST00000470339 USP54Q70EL1 1684 aa20.37■□□□□ 0.85
COL4A5-203ENST00000470339 LTBP4Q8N2S1 1624 aa20.36■□□□□ 0.85
COL4A5-203ENST00000470339 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
COL4A5-203ENST00000470339 NME9Q86XW9 330 aa20.36■□□□□ 0.85
COL4A5-203ENST00000470339 COG3Q96JB2 828 aa20.36■□□□□ 0.85
COL4A5-203ENST00000470339 ORAI2Q96SN7 254 aa20.36■□□□□ 0.85
COL4A5-203ENST00000470339 USP31Q70CQ4 1352 aa20.35■□□□□ 0.85
COL4A5-203ENST00000470339 MAP2P11137 1827 aaKnown RBP20.35■□□□□ 0.85
COL4A5-203ENST00000470339 FBXO41Q8TF61 875 aa20.35■□□□□ 0.85
COL4A5-203ENST00000470339 PSME1Q06323 249 aa20.34■□□□□ 0.85
COL4A5-203ENST00000470339 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
COL4A5-203ENST00000470339 PIK3C2AO00443 1686 aa20.33■□□□□ 0.85
COL4A5-203ENST00000470339 OVOS2A0A0J9YW53 1432 aa20.33■□□□□ 0.84
COL4A5-203ENST00000470339 OVOS2Q6IE36 1432 aa20.33■□□□□ 0.84
COL4A5-203ENST00000470339 INSRP06213 1382 aa20.33■□□□□ 0.84
COL4A5-203ENST00000470339 CERKQ8TCT0 537 aa20.32■□□□□ 0.84
COL4A5-203ENST00000470339 TRPM3Q9HCF6 1732 aaPredicted RBP20.31■□□□□ 0.84
COL4A5-203ENST00000470339 TNNT2P45379 298 aaPredicted RBP20.31■□□□□ 0.84
COL4A5-203ENST00000470339 MTHFSP49914 203 aa20.31■□□□□ 0.84
COL4A5-203ENST00000470339 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
COL4A5-203ENST00000470339 FOXO3O43524 673 aa20.3■□□□□ 0.84
COL4A5-203ENST00000470339 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
COL4A5-203ENST00000470339 YTHDC1Q96MU7 727 aaKnown RBP20.3■□□□□ 0.84
COL4A5-203ENST00000470339 SLAIN2Q9P270 581 aa20.3■□□□□ 0.84
COL4A5-203ENST00000470339 ZRANB1Q9UGI0 708 aa20.29■□□□□ 0.84
COL4A5-203ENST00000470339 MARF1Q9Y4F3 1742 aaKnown RBP20.28■□□□□ 0.84
COL4A5-203ENST00000470339 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
COL4A5-203ENST00000470339 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.84
COL4A5-203ENST00000470339 KRT28Q7Z3Y7 464 aa20.27■□□□□ 0.84
COL4A5-203ENST00000470339 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.83
COL4A5-203ENST00000470339 PNPLA6Q8IY17 1366 aa20.26■□□□□ 0.83
COL4A5-203ENST00000470339 PAK3O75914 559 aaPredicted RBP20.26■□□□□ 0.83
COL4A5-203ENST00000470339 ABTB2Q8N961 1025 aa20.26■□□□□ 0.83
COL4A5-203ENST00000470339 SBNO1A3KN83 1393 aa20.25■□□□□ 0.83
COL4A5-203ENST00000470339 NLRP6P59044 892 aa20.25■□□□□ 0.83
COL4A5-203ENST00000470339 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
COL4A5-203ENST00000470339 SHPRHQ149N8 1683 aa20.24■□□□□ 0.83
COL4A5-203ENST00000470339 ALS2Q96Q42 1657 aa20.24■□□□□ 0.83
COL4A5-203ENST00000470339 WDR43Q15061 677 aaKnown RBP eCLIP20.24■□□□□ 0.83
COL4A5-203ENST00000470339 BRINP3Q76B58 766 aa20.24■□□□□ 0.83
COL4A5-203ENST00000470339 CDK12Q9NYV4 1490 aaPredicted RBP20.22■□□□□ 0.83
COL4A5-203ENST00000470339 CENPBP07199 599 aaPredicted RBP20.21■□□□□ 0.83
COL4A5-203ENST00000470339 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
COL4A5-203ENST00000470339 PXDNQ92626 1479 aa20.21■□□□□ 0.83
COL4A5-203ENST00000470339 ADAMTS8Q9UP79 889 aa20.2■□□□□ 0.82
COL4A5-203ENST00000470339 NHSL1Q5SYE7 1610 aa20.2■□□□□ 0.82
COL4A5-203ENST00000470339 KIF24Q5T7B8 1368 aa20.2■□□□□ 0.82
COL4A5-203ENST00000470339 BLMP54132 1417 aaPredicted RBP20.19■□□□□ 0.82
COL4A5-203ENST00000470339 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
COL4A5-203ENST00000470339 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
COL4A5-203ENST00000470339 KCNH5Q8NCM2 988 aa20.18■□□□□ 0.82
COL4A5-203ENST00000470339 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
COL4A5-203ENST00000470339 SOS2Q07890 1332 aaPredicted RBP20.17■□□□□ 0.82
COL4A5-203ENST00000470339 SLIT3O75094 1523 aa20.17■□□□□ 0.82
COL4A5-203ENST00000470339 DIAPH1O60610 1272 aaKnown RBP20.16■□□□□ 0.82
COL4A5-203ENST00000470339 FBLN1P23142 703 aa20.16■□□□□ 0.82
COL4A5-203ENST00000470339 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
COL4A5-203ENST00000470339 USP19O94966 1318 aa20.16■□□□□ 0.82
COL4A5-203ENST00000470339 TNS3Q68CZ2 1445 aa20.16■□□□□ 0.82
COL4A5-203ENST00000470339 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
COL4A5-203ENST00000470339 SPATA31A3Q5VYP0 1347 aa20.15■□□□□ 0.82
COL4A5-203ENST00000470339 ARHGEF10O15013 1369 aa20.15■□□□□ 0.82
COL4A5-203ENST00000470339 PHRF1Q9P1Y6 1649 aaKnown RBP20.15■□□□□ 0.82
COL4A5-203ENST00000470339 LTN1O94822 1766 aa20.14■□□□□ 0.81
COL4A5-203ENST00000470339 PEAK1Q9H792 1746 aa20.14■□□□□ 0.81
COL4A5-203ENST00000470339 NFAT5O94916 1531 aa20.14■□□□□ 0.81
COL4A5-203ENST00000470339 NUTM2GQ5VZR2 741 aa20.14■□□□□ 0.81
COL4A5-203ENST00000470339 MAP3K19Q56UN5 1328 aa20.13■□□□□ 0.81
COL4A5-203ENST00000470339 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
COL4A5-203ENST00000470339 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
COL4A5-203ENST00000470339 DDX17Q92841 729 aaKnown RBP20.13■□□□□ 0.81
COL4A5-203ENST00000470339 ROBO1Q9Y6N7 1651 aa20.13■□□□□ 0.81
COL4A5-203ENST00000470339 FLT4P35916 1363 aa20.12■□□□□ 0.81
COL4A5-203ENST00000470339 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
COL4A5-203ENST00000470339 TOM1O60784 492 aa20.11■□□□□ 0.81
COL4A5-203ENST00000470339 RTL1A6NKG5 1358 aa20.1■□□□□ 0.81
COL4A5-203ENST00000470339 AHDC1Q5TGY3 1603 aaPredicted RBP20.1■□□□□ 0.81
COL4A5-203ENST00000470339 GCP02774 474 aa20.1■□□□□ 0.81
COL4A5-203ENST00000470339 IL13P35225 146 aa20.1■□□□□ 0.81
COL4A5-203ENST00000470339 LMOD2Q6P5Q4 547 aa20.1■□□□□ 0.81
COL4A5-203ENST00000470339 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
COL4A5-203ENST00000470339 PNNQ9H307 717 aaKnown RBP20.1■□□□□ 0.81
COL4A5-203ENST00000470339 CRYBG1Q9Y4K1 1723 aa20.1■□□□□ 0.81
COL4A5-203ENST00000470339 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
COL4A5-203ENST00000470339 AMPHP49418 695 aa20.09■□□□□ 0.81
COL4A5-203ENST00000470339 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL4A5-203ENST00000470339 SOX12O15370 315 aa20.08■□□□□ 0.81
COL4A5-203ENST00000470339 RUNDC1Q96C34 613 aa20.07■□□□□ 0.8
COL4A5-203ENST00000470339 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
COL4A5-203ENST00000470339 FCHSD2O94868 740 aa20.06■□□□□ 0.8
COL4A5-203ENST00000470339 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms