RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 SBNO1A3KN83 1393 aa28.51■■■□□ 2.16
BRAF-202ENST00000469930 TTC21BQ7Z4L5 1316 aa28.51■■■□□ 2.15
BRAF-202ENST00000469930 KRT28Q7Z3Y7 464 aa28.51■■■□□ 2.15
BRAF-202ENST00000469930 CGNL1Q0VF96 1302 aa28.5■■■□□ 2.15
BRAF-202ENST00000469930 AMER1Q5JTC6 1135 aaPredicted RBP28.5■■■□□ 2.15
BRAF-202ENST00000469930 PXDNQ92626 1479 aa28.5■■■□□ 2.15
BRAF-202ENST00000469930 NSD2O96028 1365 aa28.5■■■□□ 2.15
BRAF-202ENST00000469930 TRPM3Q9HCF6 1732 aaPredicted RBP28.49■■■□□ 2.15
BRAF-202ENST00000469930 FYB1O15117 783 aa28.44■■■□□ 2.14
BRAF-202ENST00000469930 USP31Q70CQ4 1352 aa28.44■■■□□ 2.14
BRAF-202ENST00000469930 USP54Q70EL1 1684 aa28.42■■■□□ 2.14
BRAF-202ENST00000469930 DDX17Q92841 729 aaKnown RBP28.41■■■□□ 2.14
BRAF-202ENST00000469930 SPATA31A3Q5VYP0 1347 aa28.41■■■□□ 2.14
BRAF-202ENST00000469930 ALS2Q96Q42 1657 aa28.4■■■□□ 2.14
BRAF-202ENST00000469930 PIP4K2BP78356 416 aa28.4■■■□□ 2.14
BRAF-202ENST00000469930 DIEXFQ68CQ4 756 aaKnown RBP28.4■■■□□ 2.14
BRAF-202ENST00000469930 KIF20BQ96Q89 1820 aa28.4■■■□□ 2.14
BRAF-202ENST00000469930 TNS3Q68CZ2 1445 aa28.39■■■□□ 2.14
BRAF-202ENST00000469930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.39■■■□□ 2.143e-7■■■■□ 19.4
BRAF-202ENST00000469930 PIK3C2AO00443 1686 aa28.38■■■□□ 2.13
BRAF-202ENST00000469930 XPCQ01831 940 aaPredicted RBP28.37■■■□□ 2.13
BRAF-202ENST00000469930 NME9Q86XW9 330 aa28.37■■■□□ 2.13
BRAF-202ENST00000469930 LRRC59Q96AG4 307 aaKnown RBP28.37■■■□□ 2.13
BRAF-202ENST00000469930 ANKRD26Q9UPS8 1709 aa28.37■■■□□ 2.13
BRAF-202ENST00000469930 ARHGEF10O15013 1369 aa28.37■■■□□ 2.13
BRAF-202ENST00000469930 OVOS2A0A0J9YW53 1432 aa28.36■■■□□ 2.13
BRAF-202ENST00000469930 OVOS2Q6IE36 1432 aa28.36■■■□□ 2.13
BRAF-202ENST00000469930 PAK3O75914 559 aaPredicted RBP28.36■■■□□ 2.13
BRAF-202ENST00000469930 ABTB2Q8N961 1025 aa28.36■■■□□ 2.13
BRAF-202ENST00000469930 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
BRAF-202ENST00000469930 COL16A1Q07092 1604 aaPredicted RBP28.35■■■□□ 2.13
BRAF-202ENST00000469930 RALBP1Q15311 655 aa28.34■■■□□ 2.13
BRAF-202ENST00000469930 PHLPP1O60346 1717 aa28.34■■■□□ 2.13
BRAF-202ENST00000469930 PARD3Q8TEW0 1356 aa28.34■■■□□ 2.13
BRAF-202ENST00000469930 NLRP13Q86W25 1043 aa28.33■■■□□ 2.13
BRAF-202ENST00000469930 COG3Q96JB2 828 aa28.32■■■□□ 2.12
BRAF-202ENST00000469930 GGNBP2Q9H3C7 697 aa28.32■■■□□ 2.12
BRAF-202ENST00000469930 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
BRAF-202ENST00000469930 CC2D1BQ5T0F9 858 aaKnown RBP28.31■■■□□ 2.12
BRAF-202ENST00000469930 MED1Q15648 1581 aaPredicted RBP28.3■■■□□ 2.12
BRAF-202ENST00000469930 USP19O94966 1318 aa28.3■■■□□ 2.12
BRAF-202ENST00000469930 ANP32CO43423 234 aa28.3■■■□□ 2.12
BRAF-202ENST00000469930 NLRP6P59044 892 aa28.3■■■□□ 2.12
BRAF-202ENST00000469930 MARF1Q9Y4F3 1742 aaKnown RBP28.29■■■□□ 2.12
BRAF-202ENST00000469930 MORC1Q86VD1 984 aa28.28■■■□□ 2.12
BRAF-202ENST00000469930 ZRANB1Q9UGI0 708 aa28.27■■■□□ 2.12
BRAF-202ENST00000469930 SLIT3O75094 1523 aa28.27■■■□□ 2.12
BRAF-202ENST00000469930 AATKQ6ZMQ8 1374 aa28.26■■■□□ 2.12
BRAF-202ENST00000469930 COL22A1Q8NFW1 1626 aaPredicted RBP28.25■■■□□ 2.11
BRAF-202ENST00000469930 KCNH5Q8NCM2 988 aa28.24■■■□□ 2.11
BRAF-202ENST00000469930 PNPLA6Q8IY17 1366 aa28.23■■■□□ 2.11
BRAF-202ENST00000469930 LMOD2Q6P5Q4 547 aa28.22■■■□□ 2.11
BRAF-202ENST00000469930 CRYBG1Q9Y4K1 1723 aa28.22■■■□□ 2.11
BRAF-202ENST00000469930 NUTM2GQ5VZR2 741 aa28.2■■■□□ 2.1
BRAF-202ENST00000469930 JCADQ9P266 1359 aa28.19■■■□□ 2.1
BRAF-202ENST00000469930 SHPRHQ149N8 1683 aa28.19■■■□□ 2.1
BRAF-202ENST00000469930 MYBBP1AQ9BQG0 1328 aaKnown RBP28.18■■■□□ 2.1
BRAF-202ENST00000469930 GCP02774 474 aa28.18■■■□□ 2.1
BRAF-202ENST00000469930 HSPA1LP34931 641 aa28.18■■■□□ 2.1
BRAF-202ENST00000469930 NFAT5O94916 1531 aa28.18■■■□□ 2.1
BRAF-202ENST00000469930 PHRF1Q9P1Y6 1649 aaKnown RBP28.17■■■□□ 2.1
BRAF-202ENST00000469930 KIF24Q5T7B8 1368 aa28.16■■■□□ 2.1
BRAF-202ENST00000469930 PPP2R1AP30153 589 aa28.16■■■□□ 2.1
BRAF-202ENST00000469930 SMG6Q86US8 1419 aaKnown RBP28.15■■■□□ 2.1
BRAF-202ENST00000469930 ABCA3Q99758 1704 aa28.13■■■□□ 2.09
BRAF-202ENST00000469930 POLKQ9UBT6 870 aa28.13■■■□□ 2.09
BRAF-202ENST00000469930 CPDO75976 1380 aa28.12■■■□□ 2.09
BRAF-202ENST00000469930 CNGB1Q14028 1251 aaPredicted RBP28.11■■■□□ 2.09
BRAF-202ENST00000469930 ARHGEF25Q86VW2 580 aa28.11■■■□□ 2.09
BRAF-202ENST00000469930 INSRP06213 1382 aa28.11■■■□□ 2.09
BRAF-202ENST00000469930 MAP2P11137 1827 aaKnown RBP28.1■■■□□ 2.09
BRAF-202ENST00000469930 SPATA31A6Q5VVP1 1343 aa28.1■■■□□ 2.09
BRAF-202ENST00000469930 CCER2I3L3R5 266 aa28.09■■■□□ 2.09
BRAF-202ENST00000469930 CABLES1Q8TDN4 633 aa28.09■■■□□ 2.09
BRAF-202ENST00000469930 ABCC6O95255 1503 aa28.08■■■□□ 2.09
BRAF-202ENST00000469930 TNNT2P45379 298 aaPredicted RBP28.08■■■□□ 2.09
BRAF-202ENST00000469930 MTHFSP49914 203 aa28.07■■■□□ 2.08
BRAF-202ENST00000469930 MIER1Q8N108 512 aa28.07■■■□□ 2.08
BRAF-202ENST00000469930 MAP3K19Q56UN5 1328 aa28.07■■■□□ 2.08
BRAF-202ENST00000469930 RTL1A6NKG5 1358 aa28.07■■■□□ 2.08
BRAF-202ENST00000469930 FBLN1P23142 703 aa28.05■■■□□ 2.08
BRAF-202ENST00000469930 CDK12Q9NYV4 1490 aaPredicted RBP28.05■■■□□ 2.08
BRAF-202ENST00000469930 RRS1Q15050 365 aaKnown RBP28.04■■■□□ 2.08
BRAF-202ENST00000469930 EMILIN1Q9Y6C2 1016 aa28.03■■■□□ 2.08
BRAF-202ENST00000469930 FLT4P35916 1363 aa28.02■■■□□ 2.08
BRAF-202ENST00000469930 LTN1O94822 1766 aa28.02■■■□□ 2.08
BRAF-202ENST00000469930 IP6K1Q92551 441 aa28.02■■■□□ 2.08
BRAF-202ENST00000469930 HAP1P54257 671 aaPredicted RBP28.01■■■□□ 2.07
BRAF-202ENST00000469930 KIAA0232Q92628 1395 aa28■■■□□ 2.07
BRAF-202ENST00000469930 SOX12O15370 315 aa28■■■□□ 2.07
BRAF-202ENST00000469930 ILDR2Q71H61 639 aa28■■■□□ 2.07
BRAF-202ENST00000469930 CFAP53Q96M91 514 aa28■■■□□ 2.07
BRAF-202ENST00000469930 PEAK1Q9H792 1746 aa28■■■□□ 2.07
BRAF-202ENST00000469930 COL18A1P39060 1754 aa27.99■■■□□ 2.07
BRAF-202ENST00000469930 ZC3H6P61129 1189 aaKnown RBP27.99■■■□□ 2.07
BRAF-202ENST00000469930 HOXC9P31274 260 aa27.98■■■□□ 2.07
BRAF-202ENST00000469930 AMPHP49418 695 aa27.98■■■□□ 2.07
BRAF-202ENST00000469930 BLMP54132 1417 aaPredicted RBP27.98■■■□□ 2.07
BRAF-202ENST00000469930 COL3A1P02461 1466 aaPredicted RBP27.97■■■□□ 2.07
BRAF-202ENST00000469930 LMO7Q8WWI1 1683 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms