RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 PLCH1Q4KWH8 1693 aa16.63■□□□□ 0.25
FAM228B-203ENST00000469867 VPS72Q15906 364 aa16.63■□□□□ 0.25
FAM228B-203ENST00000469867 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
FAM228B-203ENST00000469867 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
FAM228B-203ENST00000469867 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
FAM228B-203ENST00000469867 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
FAM228B-203ENST00000469867 SEPT12Q8IYM1 358 aa16.62■□□□□ 0.25
FAM228B-203ENST00000469867 A0A0G2JS52 829 aa16.61■□□□□ 0.25
FAM228B-203ENST00000469867 MYT1Q01538 1121 aa16.61■□□□□ 0.25
FAM228B-203ENST00000469867 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
FAM228B-203ENST00000469867 KIAA1210Q9ULL0 1709 aa16.61■□□□□ 0.25
FAM228B-203ENST00000469867 ACEP12821 1306 aa16.6■□□□□ 0.25
FAM228B-203ENST00000469867 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
FAM228B-203ENST00000469867 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
FAM228B-203ENST00000469867 NWD2Q9ULI1 1742 aa16.59■□□□□ 0.25
FAM228B-203ENST00000469867 PRDM11Q9NQV5 511 aa16.59■□□□□ 0.25
FAM228B-203ENST00000469867 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
FAM228B-203ENST00000469867 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.25
FAM228B-203ENST00000469867 NBPF8Q3BBV2 869 aa16.58■□□□□ 0.25
FAM228B-203ENST00000469867 BRWD3Q6RI45 1802 aa16.58■□□□□ 0.24
FAM228B-203ENST00000469867 CABP2Q9NPB3 220 aa16.58■□□□□ 0.24
FAM228B-203ENST00000469867 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
FAM228B-203ENST00000469867 CHRNA2Q15822 529 aa16.57■□□□□ 0.24
FAM228B-203ENST00000469867 ONECUT3O60422 494 aaPredicted RBP16.56■□□□□ 0.24
FAM228B-203ENST00000469867 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
FAM228B-203ENST00000469867 POLR3AO14802 1390 aaPredicted RBP16.56■□□□□ 0.24
FAM228B-203ENST00000469867 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
FAM228B-203ENST00000469867 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
FAM228B-203ENST00000469867 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
FAM228B-203ENST00000469867 PLEKHG3A1L390 1219 aa16.55■□□□□ 0.24
FAM228B-203ENST00000469867 KRT27Q7Z3Y8 459 aa16.55■□□□□ 0.24
FAM228B-203ENST00000469867 CRYBG1Q9Y4K1 1723 aa16.54■□□□□ 0.24
FAM228B-203ENST00000469867 TOPAZ1Q8N9V7 1692 aa16.54■□□□□ 0.24
FAM228B-203ENST00000469867 COL14A1Q05707 1796 aaKnown RBP16.54■□□□□ 0.24
FAM228B-203ENST00000469867 NRAPQ86VF7 1730 aa16.54■□□□□ 0.24
FAM228B-203ENST00000469867 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
FAM228B-203ENST00000469867 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
FAM228B-203ENST00000469867 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
FAM228B-203ENST00000469867 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
FAM228B-203ENST00000469867 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
FAM228B-203ENST00000469867 BLMP54132 1417 aaPredicted RBP16.52■□□□□ 0.24
FAM228B-203ENST00000469867 CABP1Q9NZU7 370 aa16.52■□□□□ 0.23
FAM228B-203ENST00000469867 USP35Q9P2H5 1018 aa16.52■□□□□ 0.23
FAM228B-203ENST00000469867 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
FAM228B-203ENST00000469867 SPATA31A5Q5VU36 1347 aa16.51■□□□□ 0.23
FAM228B-203ENST00000469867 SPATA31A7Q8IWB4 1347 aa16.51■□□□□ 0.23
FAM228B-203ENST00000469867 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
FAM228B-203ENST00000469867 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
FAM228B-203ENST00000469867 SF3B2Q13435 895 aaKnown RBP16.5■□□□□ 0.23
FAM228B-203ENST00000469867 PHRF1Q9P1Y6 1649 aaKnown RBP16.49■□□□□ 0.23
FAM228B-203ENST00000469867 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
FAM228B-203ENST00000469867 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
FAM228B-203ENST00000469867 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
FAM228B-203ENST00000469867 GCP02774 474 aa16.46■□□□□ 0.23
FAM228B-203ENST00000469867 EVA1CP58658 441 aa16.46■□□□□ 0.23
FAM228B-203ENST00000469867 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
FAM228B-203ENST00000469867 CENPBP07199 599 aaPredicted RBP16.46■□□□□ 0.23
FAM228B-203ENST00000469867 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
FAM228B-203ENST00000469867 NLRP6P59044 892 aa16.45■□□□□ 0.22
FAM228B-203ENST00000469867 USP19O94966 1318 aa16.45■□□□□ 0.22
FAM228B-203ENST00000469867 USP6P35125 1406 aa16.45■□□□□ 0.22
FAM228B-203ENST00000469867 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
FAM228B-203ENST00000469867 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
FAM228B-203ENST00000469867 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
FAM228B-203ENST00000469867 CPDO75976 1380 aa16.42■□□□□ 0.22
FAM228B-203ENST00000469867 SSH2Q76I76 1423 aa16.42■□□□□ 0.22
FAM228B-203ENST00000469867 THSD7AQ9UPZ6 1657 aa16.41■□□□□ 0.22
FAM228B-203ENST00000469867 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
FAM228B-203ENST00000469867 BAG6P46379 1132 aa16.41■□□□□ 0.22
FAM228B-203ENST00000469867 CARD11Q9BXL7 1154 aa16.41■□□□□ 0.22
FAM228B-203ENST00000469867 SOX12O15370 315 aa16.4■□□□□ 0.22
FAM228B-203ENST00000469867 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
FAM228B-203ENST00000469867 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
FAM228B-203ENST00000469867 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
FAM228B-203ENST00000469867 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
FAM228B-203ENST00000469867 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
FAM228B-203ENST00000469867 TRIM37O94972 964 aa16.38■□□□□ 0.21
FAM228B-203ENST00000469867 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
FAM228B-203ENST00000469867 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
FAM228B-203ENST00000469867 TTC21BQ7Z4L5 1316 aa16.37■□□□□ 0.21
FAM228B-203ENST00000469867 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
FAM228B-203ENST00000469867 PSDA5PKW4 1024 aaPredicted RBP16.37■□□□□ 0.21
FAM228B-203ENST00000469867 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
FAM228B-203ENST00000469867 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
FAM228B-203ENST00000469867 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
FAM228B-203ENST00000469867 AXIN2Q9Y2T1 843 aa16.36■□□□□ 0.21
FAM228B-203ENST00000469867 KTN1Q86UP2 1357 aaKnown RBP16.35■□□□□ 0.21
FAM228B-203ENST00000469867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
FAM228B-203ENST00000469867 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
FAM228B-203ENST00000469867 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
FAM228B-203ENST00000469867 SLIT3O75094 1523 aa16.34■□□□□ 0.21
FAM228B-203ENST00000469867 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
FAM228B-203ENST00000469867 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.2
FAM228B-203ENST00000469867 CRB1P82279 1406 aa16.33■□□□□ 0.2
FAM228B-203ENST00000469867 EZH2Q15910 746 aaKnown RBP16.33■□□□□ 0.2
FAM228B-203ENST00000469867 RGPD1P0DJD0 1748 aa16.32■□□□□ 0.2
FAM228B-203ENST00000469867 SBNO2Q9Y2G9 1366 aa16.32■□□□□ 0.2
FAM228B-203ENST00000469867 THRAP3Q9Y2W1 955 aaKnown RBP16.32■□□□□ 0.2
FAM228B-203ENST00000469867 AKAP12Q02952 1782 aa16.32■□□□□ 0.2
FAM228B-203ENST00000469867 APBA3O96018 575 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms