RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 NSFL1CQ9UNZ2 370 aaKnown RBP9.88□□□□□ -0.83
TPM3-215ENST00000469717 ATP10BO94823 1461 aa9.88□□□□□ -0.83
TPM3-215ENST00000469717 KLHL40Q2TBA0 621 aa9.87□□□□□ -0.83
TPM3-215ENST00000469717 U2AF1L5P0DN76 240 aaPredicted RBP9.87□□□□□ -0.83
TPM3-215ENST00000469717 U2AF1Q01081 240 aaKnown RBP eCLIP9.87□□□□□ -0.837e-10■■□□□ 13
TPM3-215ENST00000469717 PHF23Q9BUL5 403 aaPredicted RBP9.87□□□□□ -0.83
TPM3-215ENST00000469717 ZMYM3Q14202 1370 aa9.87□□□□□ -0.83
TPM3-215ENST00000469717 TBC1D9Q6ZT07 1266 aa9.87□□□□□ -0.83
TPM3-215ENST00000469717 GRIN2AQ12879 1464 aa9.87□□□□□ -0.83
TPM3-215ENST00000469717 SCAF11Q99590 1463 aaKnown RBP9.87□□□□□ -0.83
TPM3-215ENST00000469717 SAMD9LQ8IVG5 1584 aa9.86□□□□□ -0.83
TPM3-215ENST00000469717 HDAC1Q13547 482 aaPredicted RBP9.86□□□□□ -0.83
TPM3-215ENST00000469717 ANKRD45Q5TZF3 282 aa9.86□□□□□ -0.83
TPM3-215ENST00000469717 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
TPM3-215ENST00000469717 NUP160Q12769 1436 aa9.86□□□□□ -0.83
TPM3-215ENST00000469717 IQGAP1P46940 1657 aa9.86□□□□□ -0.83
TPM3-215ENST00000469717 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
TPM3-215ENST00000469717 NOL7Q9UMY1 257 aaKnown RBP9.86□□□□□ -0.83
TPM3-215ENST00000469717 SYCP2Q9BX26 1530 aa9.86□□□□□ -0.83
TPM3-215ENST00000469717 NPC1L1Q9UHC9 1359 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 PRPF40AO75400 957 aaKnown RBP9.85□□□□□ -0.83
TPM3-215ENST00000469717 NUCB1Q02818 461 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 LMOD2Q6P5Q4 547 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 ATF7IPQ6VMQ6 1270 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 ZGPATQ8N5A5 531 aaKnown RBP9.85□□□□□ -0.83
TPM3-215ENST00000469717 MADDQ8WXG6 1647 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 POLR3AO14802 1390 aaPredicted RBP9.85□□□□□ -0.83
TPM3-215ENST00000469717 WDR63Q8IWG1 891 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 GPT2Q8TD30 523 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 ZBTB40Q9NUA8 1239 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 LMBRD1Q9NUN5 540 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 SHPRHQ149N8 1683 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 ERVK-7P63135 1459 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 IQSEC2Q5JU85 1478 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 NSD3Q9BZ95 1437 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 SYCE3A1L190 88 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 GOLGA6L22H0YM25 854 aa9.85□□□□□ -0.83
TPM3-215ENST00000469717 CEP152O94986 1710 aa9.84□□□□□ -0.83
TPM3-215ENST00000469717 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
TPM3-215ENST00000469717 C17orf53Q8N3J3 647 aaPredicted RBP9.84□□□□□ -0.83
TPM3-215ENST00000469717 DDX19BQ9UMR2 479 aa9.84□□□□□ -0.83
TPM3-215ENST00000469717 SOX12O15370 315 aa9.84□□□□□ -0.83
TPM3-215ENST00000469717 ZNF830Q96NB3 372 aaPredicted RBP9.84□□□□□ -0.83
TPM3-215ENST00000469717 ZKSCAN5Q9Y2L8 839 aa9.84□□□□□ -0.83
TPM3-215ENST00000469717 ZNF500O60304 480 aaPredicted RBP9.83□□□□□ -0.84
TPM3-215ENST00000469717 FOXD4L6Q3SYB3 417 aaPredicted RBP9.83□□□□□ -0.84
TPM3-215ENST00000469717 FOXD4L3Q6VB84 417 aaPredicted RBP9.83□□□□□ -0.84
TPM3-215ENST00000469717 TMEM63CQ9P1W3 806 aa9.83□□□□□ -0.84
TPM3-215ENST00000469717 ADGRF5Q8IZF2 1346 aa9.83□□□□□ -0.84
TPM3-215ENST00000469717 U2SURPO15042 1029 aaKnown RBP9.83□□□□□ -0.84
TPM3-215ENST00000469717 PDLIM2Q96JY6 352 aa9.83□□□□□ -0.84
TPM3-215ENST00000469717 IGSF3O75054 1194 aa9.83□□□□□ -0.84
TPM3-215ENST00000469717 ZNF445P59923 1031 aa9.83□□□□□ -0.84
TPM3-215ENST00000469717 CBX1P83916 185 aa9.82□□□□□ -0.84
TPM3-215ENST00000469717 NGEFQ8N5V2 710 aa9.82□□□□□ -0.84
TPM3-215ENST00000469717 CDC42BPBQ9Y5S2 1711 aa9.82□□□□□ -0.84
TPM3-215ENST00000469717 TRAK1Q9UPV9 953 aa9.82□□□□□ -0.84
TPM3-215ENST00000469717 ABCA8O94911 1581 aa9.82□□□□□ -0.84
TPM3-215ENST00000469717 KDM5AP29375 1690 aaKnown RBP9.82□□□□□ -0.84
TPM3-215ENST00000469717 ARHGEF5Q12774 1597 aa9.81□□□□□ -0.84
TPM3-215ENST00000469717 UNC13BO14795 1591 aa9.81□□□□□ -0.84
TPM3-215ENST00000469717 ATAD2Q6PL18 1390 aa9.81□□□□□ -0.84
TPM3-215ENST00000469717 BMP2KLQ5H9B9 411 aa9.81□□□□□ -0.84
TPM3-215ENST00000469717 ZSCAN20P17040 1043 aaPredicted RBP9.81□□□□□ -0.84
TPM3-215ENST00000469717 ZDHHC9Q9Y397 364 aa9.81□□□□□ -0.84
TPM3-215ENST00000469717 ELL2O00472 640 aaPredicted RBP9.8□□□□□ -0.84
TPM3-215ENST00000469717 SMAP1Q8IYB5 467 aaPredicted RBP9.8□□□□□ -0.84
TPM3-215ENST00000469717 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
TPM3-215ENST00000469717 GSPT1P15170 499 aaKnown RBP9.8□□□□□ -0.84
TPM3-215ENST00000469717 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
TPM3-215ENST00000469717 KIF16BQ96L93 1317 aa9.8□□□□□ -0.84
TPM3-215ENST00000469717 TERF1P54274 439 aa9.8□□□□□ -0.84
TPM3-215ENST00000469717 DNTTIP2Q5QJE6 756 aaKnown RBP9.8□□□□□ -0.84
TPM3-215ENST00000469717 SIRT2Q8IXJ6 389 aa9.8□□□□□ -0.84
TPM3-215ENST00000469717 C16orf71Q8IYS4 520 aaPredicted RBP9.8□□□□□ -0.84
TPM3-215ENST00000469717 ZNF710Q8N1W2 664 aa9.8□□□□□ -0.84
TPM3-215ENST00000469717 IQGAP3Q86VI3 1631 aa9.8□□□□□ -0.84
TPM3-215ENST00000469717 DYNC1I1O14576 645 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 BRD2P25440 801 aaKnown RBP9.79□□□□□ -0.84
TPM3-215ENST00000469717 MAP7D2Q96T17 732 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 KANK1Q14678 1352 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 CD109Q6YHK3 1445 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 APBB1O00213 710 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 IBTKQ9P2D0 1353 aaPredicted RBP9.79□□□□□ -0.84
TPM3-215ENST00000469717 A0A0G2JS52 829 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 TMEM132EQ6IEE7 984 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 SASS6Q6UVJ0 657 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 OTUD7AQ8TE49 926 aaPredicted RBP9.79□□□□□ -0.84
TPM3-215ENST00000469717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.79□□□□□ -0.84
TPM3-215ENST00000469717 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 SPDYE4A6NLX3 237 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 PTMAP06454 111 aaKnown RBP9.79□□□□□ -0.84
TPM3-215ENST00000469717 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
TPM3-215ENST00000469717 SCAPERQ9BY12 1400 aa9.78□□□□□ -0.84
TPM3-215ENST00000469717 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
TPM3-215ENST00000469717 TMPOP42166 694 aaKnown RBP9.78□□□□□ -0.84
TPM3-215ENST00000469717 THUMPD2Q9BTF0 503 aaKnown RBP9.78□□□□□ -0.84
TPM3-215ENST00000469717 ARHGAP5Q13017 1502 aa9.78□□□□□ -0.84
TPM3-215ENST00000469717 CYP2E1P05181 493 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms