RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 VAC14Q08AM6 782 aa8.01□□□□□ -1.13
VPS8-220ENST00000469713 NUDT12Q9BQG2 462 aa8.01□□□□□ -1.13
VPS8-220ENST00000469713 SLC6A16Q9GZN6 736 aa8.01□□□□□ -1.13
VPS8-220ENST00000469713 WASHC4Q2M389 1173 aa8□□□□□ -1.13
VPS8-220ENST00000469713 IRX2Q9BZI1 471 aaPredicted RBP8□□□□□ -1.13
VPS8-220ENST00000469713 PNMA1Q8ND90 353 aa7.99□□□□□ -1.13
VPS8-220ENST00000469713 EVA1BQ9NVM1 165 aa7.99□□□□□ -1.13
VPS8-220ENST00000469713 FKBPLQ9UIM3 349 aa7.99□□□□□ -1.13
VPS8-220ENST00000469713 S1PR4O95977 384 aa7.98□□□□□ -1.13
VPS8-220ENST00000469713 KCNH2Q12809 1159 aa7.98□□□□□ -1.13
VPS8-220ENST00000469713 CCDC24Q8N4L8 307 aa7.98□□□□□ -1.13
VPS8-220ENST00000469713 GLMNQ92990 594 aa7.98□□□□□ -1.13
VPS8-220ENST00000469713 ARXQ96QS3 562 aa7.98□□□□□ -1.13
VPS8-220ENST00000469713 ADAMTS19Q8TE59 1207 aa7.97□□□□□ -1.13
VPS8-220ENST00000469713 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
VPS8-220ENST00000469713 CALR3Q96L12 384 aaKnown RBP7.97□□□□□ -1.13
VPS8-220ENST00000469713 PTCRAQ6ISU1 281 aaPredicted RBP7.96□□□□□ -1.14
VPS8-220ENST00000469713 KCNC4Q03721 635 aa7.95□□□□□ -1.14
VPS8-220ENST00000469713 HDGFL1Q5TGJ6 251 aa7.95□□□□□ -1.14
VPS8-220ENST00000469713 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
VPS8-220ENST00000469713 ZC3H4Q9UPT8 1303 aaKnown RBP7.95□□□□□ -1.14
VPS8-220ENST00000469713 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
VPS8-220ENST00000469713 NR1H3Q13133 447 aa7.94□□□□□ -1.14
VPS8-220ENST00000469713 UNC93B1Q9H1C4 597 aa7.94□□□□□ -1.14
VPS8-220ENST00000469713 FCF1Q9Y324 198 aaKnown RBP7.94□□□□□ -1.14
VPS8-220ENST00000469713 ZBBXA8MT70 800 aa7.93□□□□□ -1.14
VPS8-220ENST00000469713 HOMEZQ8IX15 550 aa7.93□□□□□ -1.14
VPS8-220ENST00000469713 ARMC2Q8NEN0 867 aa7.93□□□□□ -1.14
VPS8-220ENST00000469713 PPEF1O14829 653 aaPredicted RBP7.92□□□□□ -1.14
VPS8-220ENST00000469713 ALG2Q9H553 416 aa7.92□□□□□ -1.14
VPS8-220ENST00000469713 NBPF14Q5TI25 921 aa7.91□□□□□ -1.14
VPS8-220ENST00000469713 PDXDC2PQ6P474 469 aa7.91□□□□□ -1.14
VPS8-220ENST00000469713 GPKOWQ92917 476 aaPredicted RBP eCLIP7.91□□□□□ -1.14
VPS8-220ENST00000469713 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
VPS8-220ENST00000469713 SOX11P35716 441 aa7.9□□□□□ -1.14
VPS8-220ENST00000469713 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.14
VPS8-220ENST00000469713 SEMA3FQ13275 785 aa7.9□□□□□ -1.14
VPS8-220ENST00000469713 RNF223E7ERA6 249 aa7.89□□□□□ -1.15
VPS8-220ENST00000469713 PTK2Q05397 1052 aa7.89□□□□□ -1.15
VPS8-220ENST00000469713 LINC01559Q495D7 138 aa7.89□□□□□ -1.15
VPS8-220ENST00000469713 BAP1Q92560 729 aa7.89□□□□□ -1.15
VPS8-220ENST00000469713 UCN2Q96RP3 112 aa7.88□□□□□ -1.15
VPS8-220ENST00000469713 ARHGAP9Q9BRR9 750 aa7.88□□□□□ -1.15
VPS8-220ENST00000469713 GPSM3Q9Y4H4 160 aa7.88□□□□□ -1.15
VPS8-220ENST00000469713 PLA2G2CQ5R387 149 aa7.87□□□□□ -1.15
VPS8-220ENST00000469713 SH3BP5LQ7L8J4 393 aa7.87□□□□□ -1.15
VPS8-220ENST00000469713 GGCXP38435 758 aa7.86□□□□□ -1.15
VPS8-220ENST00000469713 PPP1R18Q6NYC8 613 aa7.86□□□□□ -1.15
VPS8-220ENST00000469713 ZNF511Q8NB15 262 aa7.86□□□□□ -1.15
VPS8-220ENST00000469713 ADAM32Q8TC27 787 aa7.86□□□□□ -1.15
VPS8-220ENST00000469713 FOXJ1Q92949 421 aa7.86□□□□□ -1.15
VPS8-220ENST00000469713 CARD14Q9BXL6 1004 aa7.86□□□□□ -1.15
VPS8-220ENST00000469713 PCDHB9Q9Y5E1 797 aa7.86□□□□□ -1.15
VPS8-220ENST00000469713 ANKLE1Q8NAG6 615 aa7.85□□□□□ -1.15
VPS8-220ENST00000469713 PPP1R12CQ9BZL4 782 aa7.85□□□□□ -1.15
VPS8-220ENST00000469713 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.85□□□□□ -1.15
VPS8-220ENST00000469713 MAGEB6P1A0A0J9YX57 407 aa7.84□□□□□ -1.15
VPS8-220ENST00000469713 PALM3A6NDB9 673 aaPredicted RBP7.84□□□□□ -1.15
VPS8-220ENST00000469713 AGERQ15109 404 aa7.84□□□□□ -1.15
VPS8-220ENST00000469713 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
VPS8-220ENST00000469713 CFAP70Q5T0N1 1121 aa7.84□□□□□ -1.15
VPS8-220ENST00000469713 SH3RF1Q7Z6J0 888 aa7.84□□□□□ -1.15
VPS8-220ENST00000469713 ZBTB33Q86T24 672 aa7.84□□□□□ -1.15
VPS8-220ENST00000469713 PIK3CDO00329 1044 aa7.83□□□□□ -1.16
VPS8-220ENST00000469713 ZBTB24O43167 697 aaPredicted RBP7.83□□□□□ -1.16
VPS8-220ENST00000469713 RFX1P22670 979 aa7.83□□□□□ -1.16
VPS8-220ENST00000469713 SH3BP2P78314 561 aa7.83□□□□□ -1.16
VPS8-220ENST00000469713 TFIP11Q9UBB9 837 aaKnown RBP7.83□□□□□ -1.16
VPS8-220ENST00000469713 TRIM32Q13049 653 aa7.82□□□□□ -1.16
VPS8-220ENST00000469713 TBC1D9Q6ZT07 1266 aa7.82□□□□□ -1.16
VPS8-220ENST00000469713 BPHLQ86WA6 291 aaPredicted RBP7.82□□□□□ -1.16
VPS8-220ENST00000469713 LAPTM4AQ15012 233 aa7.81□□□□□ -1.16
VPS8-220ENST00000469713 ERFEQ4G0M1 354 aa7.81□□□□□ -1.16
VPS8-220ENST00000469713 DZIP3Q86Y13 1208 aaKnown RBP7.81□□□□□ -1.16
VPS8-220ENST00000469713 CEP126Q9P2H0 1117 aa7.81□□□□□ -1.16
VPS8-220ENST00000469713 LCE2BO14633 110 aa7.8□□□□□ -1.16
VPS8-220ENST00000469713 ATP9BO43861 1147 aa7.8□□□□□ -1.16
VPS8-220ENST00000469713 LMOD1P29536 600 aaPredicted RBP7.8□□□□□ -1.16
VPS8-220ENST00000469713 SKOR1P84550 965 aa7.8□□□□□ -1.16
VPS8-220ENST00000469713 FAM174AQ8TBP5 190 aa7.8□□□□□ -1.16
VPS8-220ENST00000469713 MAFBQ9Y5Q3 323 aaPredicted RBP7.8□□□□□ -1.16
VPS8-220ENST00000469713 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.79□□□□□ -1.16
VPS8-220ENST00000469713 RPIAP49247 311 aa7.79□□□□□ -1.16
VPS8-220ENST00000469713 MCCD1P59942 119 aaPredicted RBP7.79□□□□□ -1.16
VPS8-220ENST00000469713 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
VPS8-220ENST00000469713 C1QTNF2Q9BXJ5 285 aa7.79□□□□□ -1.16
VPS8-220ENST00000469713 SKIP12755 728 aa7.78□□□□□ -1.16
VPS8-220ENST00000469713 SLFNL1Q499Z3 407 aa7.78□□□□□ -1.16
VPS8-220ENST00000469713 Q6ZNB5 142 aa7.78□□□□□ -1.16
VPS8-220ENST00000469713 LIAT1Q6ZQX7 453 aa7.78□□□□□ -1.16
VPS8-220ENST00000469713 EMID1Q96A84 441 aaPredicted RBP7.78□□□□□ -1.16
VPS8-220ENST00000469713 PBXIP1Q96AQ6 731 aa7.78□□□□□ -1.16
VPS8-220ENST00000469713 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
VPS8-220ENST00000469713 WNT7BP56706 349 aa7.77□□□□□ -1.17
VPS8-220ENST00000469713 SRPK2P78362 688 aaKnown RBP7.77□□□□□ -1.17
VPS8-220ENST00000469713 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
VPS8-220ENST00000469713 PHTF2Q8N3S3 785 aa7.77□□□□□ -1.17
VPS8-220ENST00000469713 NFATC2IPQ8NCF5 419 aa7.77□□□□□ -1.17
VPS8-220ENST00000469713 SLC10A4Q96EP9 437 aa7.77□□□□□ -1.17
VPS8-220ENST00000469713 USP17L5A8MUK1 530 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms