RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 SSH2Q76I76 1423 aa31.83■■■□□ 2.69
MTA1-209ENST00000469140 KIF20BQ96Q89 1820 aa31.83■■■□□ 2.69
MTA1-209ENST00000469140 NRKQ7Z2Y5 1582 aa31.83■■■□□ 2.69
MTA1-209ENST00000469140 MST1RQ04912 1400 aa31.83■■■□□ 2.69
MTA1-209ENST00000469140 ANKRD26Q9UPS8 1709 aa31.82■■■□□ 2.68
MTA1-209ENST00000469140 TTC21AQ8NDW8 1320 aa31.81■■■□□ 2.68
MTA1-209ENST00000469140 ORAI2Q96SN7 254 aa31.79■■■□□ 2.68
MTA1-209ENST00000469140 NME9Q86XW9 330 aa31.78■■■□□ 2.68
MTA1-209ENST00000469140 TNNT2P45379 298 aaPredicted RBP31.75■■■□□ 2.67
MTA1-209ENST00000469140 PNISRQ8TF01 805 aaKnown RBP31.75■■■□□ 2.67
MTA1-209ENST00000469140 YTHDC1Q96MU7 727 aaKnown RBP31.75■■■□□ 2.67
MTA1-209ENST00000469140 KIF1AQ12756 1690 aa31.75■■■□□ 2.67
MTA1-209ENST00000469140 COG3Q96JB2 828 aa31.74■■■□□ 2.67
MTA1-209ENST00000469140 SCAF1Q9H7N4 1312 aaKnown RBP31.74■■■□□ 2.67
MTA1-209ENST00000469140 PSME1Q06323 249 aa31.73■■■□□ 2.67
MTA1-209ENST00000469140 FAM9BQ8IZU0 186 aa31.71■■■□□ 2.67
MTA1-209ENST00000469140 LTBP4Q8N2S1 1624 aa31.7■■■□□ 2.67
MTA1-209ENST00000469140 FOXO3O43524 673 aa31.69■■■□□ 2.66
MTA1-209ENST00000469140 ZRANB1Q9UGI0 708 aa31.68■■■□□ 2.66
MTA1-209ENST00000469140 USP31Q70CQ4 1352 aa31.68■■■□□ 2.66
MTA1-209ENST00000469140 OVOS2A0A0J9YW53 1432 aa31.67■■■□□ 2.66
MTA1-209ENST00000469140 OVOS2Q6IE36 1432 aa31.67■■■□□ 2.66
MTA1-209ENST00000469140 MTHFSP49914 203 aa31.66■■■□□ 2.66
MTA1-209ENST00000469140 SLAIN2Q9P270 581 aa31.66■■■□□ 2.66
MTA1-209ENST00000469140 PAK3O75914 559 aaPredicted RBP31.64■■■□□ 2.66
MTA1-209ENST00000469140 AATKQ6ZMQ8 1374 aa31.64■■■□□ 2.66
MTA1-209ENST00000469140 CFAP53Q96M91 514 aa31.62■■■□□ 2.65
MTA1-209ENST00000469140 PIK3C2AO00443 1686 aa31.61■■■□□ 2.65
MTA1-209ENST00000469140 KRT28Q7Z3Y7 464 aa31.61■■■□□ 2.65
MTA1-209ENST00000469140 ABTB2Q8N961 1025 aa31.61■■■□□ 2.65
MTA1-209ENST00000469140 NPHP3Q7Z494 1330 aa31.61■■■□□ 2.65
MTA1-209ENST00000469140 NLRP6P59044 892 aa31.59■■■□□ 2.65
MTA1-209ENST00000469140 BRINP3Q76B58 766 aa31.59■■■□□ 2.65
MTA1-209ENST00000469140 POLKQ9UBT6 870 aa31.57■■■□□ 2.65
MTA1-209ENST00000469140 USP54Q70EL1 1684 aa31.57■■■□□ 2.64
MTA1-209ENST00000469140 WDR43Q15061 677 aaKnown RBP eCLIP31.56■■■□□ 2.64
MTA1-209ENST00000469140 INSRP06213 1382 aa31.56■■■□□ 2.64
MTA1-209ENST00000469140 XPCQ01831 940 aaPredicted RBP31.55■■■□□ 2.64
MTA1-209ENST00000469140 TRPM3Q9HCF6 1732 aaPredicted RBP31.53■■■□□ 2.64
MTA1-209ENST00000469140 SMG6Q86US8 1419 aaKnown RBP31.53■■■□□ 2.64
MTA1-209ENST00000469140 PNPLA6Q8IY17 1366 aa31.53■■■□□ 2.64
MTA1-209ENST00000469140 SBNO1A3KN83 1393 aa31.52■■■□□ 2.64
MTA1-209ENST00000469140 FBLN1P23142 703 aa31.52■■■□□ 2.64
MTA1-209ENST00000469140 NUTM2GQ5VZR2 741 aa31.5■■■□□ 2.63
MTA1-209ENST00000469140 MAP2P11137 1827 aaKnown RBP31.5■■■□□ 2.63
MTA1-209ENST00000469140 HNRNPUQ00839 825 aaKnown RBP eCLIP31.49■■■□□ 2.63
MTA1-209ENST00000469140 ADAMTS8Q9UP79 889 aa31.49■■■□□ 2.63
MTA1-209ENST00000469140 DDX17Q92841 729 aaKnown RBP31.48■■■□□ 2.63
MTA1-209ENST00000469140 EMILIN1Q9Y6C2 1016 aa31.48■■■□□ 2.63
MTA1-209ENST00000469140 PXDNQ92626 1479 aa31.48■■■□□ 2.63
MTA1-209ENST00000469140 RRS1Q15050 365 aaKnown RBP31.48■■■□□ 2.63
MTA1-209ENST00000469140 PPM1GO15355 546 aaPredicted RBP31.47■■■□□ 2.63
MTA1-209ENST00000469140 CENPBP07199 599 aaPredicted RBP31.47■■■□□ 2.63
MTA1-209ENST00000469140 MARF1Q9Y4F3 1742 aaKnown RBP31.47■■■□□ 2.63
MTA1-209ENST00000469140 COL3A1P02461 1466 aaPredicted RBP31.46■■■□□ 2.63
MTA1-209ENST00000469140 CDK12Q9NYV4 1490 aaPredicted RBP31.46■■■□□ 2.63
MTA1-209ENST00000469140 NUDCQ9Y266 331 aa31.44■■■□□ 2.62
MTA1-209ENST00000469140 LMOD2Q6P5Q4 547 aa31.44■■■□□ 2.62
MTA1-209ENST00000469140 KCNH5Q8NCM2 988 aa31.44■■■□□ 2.62
MTA1-209ENST00000469140 SHPRHQ149N8 1683 aa31.43■■■□□ 2.62
MTA1-209ENST00000469140 SOS2Q07890 1332 aaPredicted RBP31.43■■■□□ 2.62
MTA1-209ENST00000469140 DIAPH1O60610 1272 aaKnown RBP31.43■■■□□ 2.62
MTA1-209ENST00000469140 ALS2Q96Q42 1657 aa31.43■■■□□ 2.62
MTA1-209ENST00000469140 BLMP54132 1417 aaPredicted RBP31.42■■■□□ 2.62
MTA1-209ENST00000469140 TNS3Q68CZ2 1445 aa31.42■■■□□ 2.62
MTA1-209ENST00000469140 SOX12O15370 315 aa31.41■■■□□ 2.62
MTA1-209ENST00000469140 SPATA31A3Q5VYP0 1347 aa31.41■■■□□ 2.62
MTA1-209ENST00000469140 USP19O94966 1318 aa31.4■■■□□ 2.62
MTA1-209ENST00000469140 KIF24Q5T7B8 1368 aa31.4■■■□□ 2.62
MTA1-209ENST00000469140 MAP3K19Q56UN5 1328 aa31.39■■■□□ 2.62
MTA1-209ENST00000469140 ARHGEF10O15013 1369 aa31.39■■■□□ 2.62
MTA1-209ENST00000469140 SLIT3O75094 1523 aa31.37■■■□□ 2.61
MTA1-209ENST00000469140 NHSL1Q5SYE7 1610 aa31.37■■■□□ 2.61
MTA1-209ENST00000469140 TOM1O60784 492 aa31.35■■■□□ 2.61
MTA1-209ENST00000469140 GCP02774 474 aa31.35■■■□□ 2.61
MTA1-209ENST00000469140 FLT4P35916 1363 aa31.35■■■□□ 2.61
MTA1-209ENST00000469140 NFAT5O94916 1531 aa31.35■■■□□ 2.61
MTA1-209ENST00000469140 IQSEC2Q5JU85 1478 aa31.35■■■□□ 2.61
MTA1-209ENST00000469140 ZBED9Q6R2W3 1325 aa31.34■■■□□ 2.61
MTA1-209ENST00000469140 U2AF1L5P0DN76 240 aaPredicted RBP31.34■■■□□ 2.61
MTA1-209ENST00000469140 AMPHP49418 695 aa31.34■■■□□ 2.61
MTA1-209ENST00000469140 U2AF1Q01081 240 aaKnown RBP eCLIP31.34■■■□□ 2.61
MTA1-209ENST00000469140 U2SURPO15042 1029 aaKnown RBP31.32■■■□□ 2.6
MTA1-209ENST00000469140 IL13P35225 146 aa31.32■■■□□ 2.6
MTA1-209ENST00000469140 PEAK1Q9H792 1746 aa31.32■■■□□ 2.6
MTA1-209ENST00000469140 ROBO1Q9Y6N7 1651 aa31.32■■■□□ 2.6
MTA1-209ENST00000469140 RTL1A6NKG5 1358 aa31.3■■■□□ 2.6
MTA1-209ENST00000469140 HSP90AB2PQ58FF8 381 aa31.29■■■□□ 2.6
MTA1-209ENST00000469140 MED1Q15648 1581 aaPredicted RBP31.28■■■□□ 2.6
MTA1-209ENST00000469140 HOXC9P31274 260 aa31.27■■■□□ 2.6
MTA1-209ENST00000469140 AHDC1Q5TGY3 1603 aaPredicted RBP31.27■■■□□ 2.6
MTA1-209ENST00000469140 EIF4A2Q14240 407 aaKnown RBP31.26■■■□□ 2.6
MTA1-209ENST00000469140 ARHGEF25Q86VW2 580 aa31.26■■■□□ 2.6
MTA1-209ENST00000469140 RUNDC1Q96C34 613 aa31.26■■■□□ 2.6
MTA1-209ENST00000469140 PNNQ9H307 717 aaKnown RBP31.26■■■□□ 2.6
MTA1-209ENST00000469140 CCDC146Q8IYE0 955 aa31.25■■■□□ 2.59
MTA1-209ENST00000469140 IP6K1Q92551 441 aa31.25■■■□□ 2.59
MTA1-209ENST00000469140 PHRF1Q9P1Y6 1649 aaKnown RBP31.24■■■□□ 2.59
MTA1-209ENST00000469140 FCHSD2O94868 740 aa31.23■■■□□ 2.59
MTA1-209ENST00000469140 LTN1O94822 1766 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms