RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 IQSEC2Q5JU85 1478 aa12.4□□□□□ -0.43
SMC1A-205ENST00000469129 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.43
SMC1A-205ENST00000469129 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
SMC1A-205ENST00000469129 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
SMC1A-205ENST00000469129 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
SMC1A-205ENST00000469129 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
SMC1A-205ENST00000469129 FYB1O15117 783 aa12.38□□□□□ -0.43
SMC1A-205ENST00000469129 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
SMC1A-205ENST00000469129 PELP1Q8IZL8 1130 aaKnown RBP12.38□□□□□ -0.43
SMC1A-205ENST00000469129 PRR36Q9H6K5 1346 aa12.37□□□□□ -0.43
SMC1A-205ENST00000469129 USP6P35125 1406 aa12.37□□□□□ -0.43
SMC1A-205ENST00000469129 FKBP8Q14318 412 aa12.37□□□□□ -0.43
SMC1A-205ENST00000469129 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
SMC1A-205ENST00000469129 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
SMC1A-205ENST00000469129 AATKQ6ZMQ8 1374 aa12.36□□□□□ -0.43
SMC1A-205ENST00000469129 PLEKHG3A1L390 1219 aa12.36□□□□□ -0.43
SMC1A-205ENST00000469129 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
SMC1A-205ENST00000469129 MTHFSP49914 203 aa12.36□□□□□ -0.43
SMC1A-205ENST00000469129 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
SMC1A-205ENST00000469129 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
SMC1A-205ENST00000469129 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
SMC1A-205ENST00000469129 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
SMC1A-205ENST00000469129 KCNA6P17658 529 aa12.34□□□□□ -0.43
SMC1A-205ENST00000469129 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
SMC1A-205ENST00000469129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMC1A-205ENST00000469129 COG3Q96JB2 828 aa12.33□□□□□ -0.44
SMC1A-205ENST00000469129 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
SMC1A-205ENST00000469129 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
SMC1A-205ENST00000469129 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
SMC1A-205ENST00000469129 ACEP12821 1306 aa12.32□□□□□ -0.44
SMC1A-205ENST00000469129 STRCP1A6NGW2 1772 aa12.31□□□□□ -0.44
SMC1A-205ENST00000469129 LTN1O94822 1766 aa12.31□□□□□ -0.44
SMC1A-205ENST00000469129 SSH2Q76I76 1423 aa12.31□□□□□ -0.44
SMC1A-205ENST00000469129 RNF123Q5XPI4 1314 aa12.31□□□□□ -0.44
SMC1A-205ENST00000469129 TTC21BQ7Z4L5 1316 aa12.31□□□□□ -0.44
SMC1A-205ENST00000469129 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
SMC1A-205ENST00000469129 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
SMC1A-205ENST00000469129 CCDC146Q8IYE0 955 aa12.3□□□□□ -0.44
SMC1A-205ENST00000469129 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
SMC1A-205ENST00000469129 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
SMC1A-205ENST00000469129 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
SMC1A-205ENST00000469129 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
SMC1A-205ENST00000469129 DIAPH1O60610 1272 aaKnown RBP12.29□□□□□ -0.44
SMC1A-205ENST00000469129 NME9Q86XW9 330 aa12.29□□□□□ -0.44
SMC1A-205ENST00000469129 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
SMC1A-205ENST00000469129 APAF1O14727 1248 aa12.28□□□□□ -0.44
SMC1A-205ENST00000469129 U2AF1L5P0DN76 240 aaPredicted RBP12.28□□□□□ -0.44
SMC1A-205ENST00000469129 U2AF1Q01081 240 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMC1A-205ENST00000469129 PHRF1Q9P1Y6 1649 aaKnown RBP12.28□□□□□ -0.44
SMC1A-205ENST00000469129 MAPK8IP3Q9UPT6 1336 aa12.28□□□□□ -0.44
SMC1A-205ENST00000469129 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
SMC1A-205ENST00000469129 DCCP43146 1447 aa12.28□□□□□ -0.44
SMC1A-205ENST00000469129 NCOA3Q9Y6Q9 1424 aa12.28□□□□□ -0.44
SMC1A-205ENST00000469129 NGDNQ8NEJ9 315 aaKnown RBP12.27□□□□□ -0.45
SMC1A-205ENST00000469129 RCAN3Q9UKA8 241 aa12.27□□□□□ -0.45
SMC1A-205ENST00000469129 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
SMC1A-205ENST00000469129 SENP3-EIF4A1A0A087X0R7 540 aa12.26□□□□□ -0.45
SMC1A-205ENST00000469129 E9PSI1 815 aa12.26□□□□□ -0.45
SMC1A-205ENST00000469129 U2SURPO15042 1029 aaKnown RBP12.26□□□□□ -0.45
SMC1A-205ENST00000469129 NEFMP07197 916 aa12.26□□□□□ -0.45
SMC1A-205ENST00000469129 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
SMC1A-205ENST00000469129 NUTM2FA1L443 756 aa12.25□□□□□ -0.45
SMC1A-205ENST00000469129 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
SMC1A-205ENST00000469129 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
SMC1A-205ENST00000469129 RRP1P56182 461 aaKnown RBP12.24□□□□□ -0.45
SMC1A-205ENST00000469129 KIF24Q5T7B8 1368 aa12.24□□□□□ -0.45
SMC1A-205ENST00000469129 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
SMC1A-205ENST00000469129 TCP11L2Q8N4U5 519 aa12.24□□□□□ -0.45
SMC1A-205ENST00000469129 CDCA7LQ96GN5 454 aa12.24□□□□□ -0.45
SMC1A-205ENST00000469129 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
SMC1A-205ENST00000469129 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
SMC1A-205ENST00000469129 PMFBP1Q8TBY8 1022 aa12.23□□□□□ -0.45
SMC1A-205ENST00000469129 PPP4R2Q9NY27 417 aa12.23□□□□□ -0.45
SMC1A-205ENST00000469129 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
SMC1A-205ENST00000469129 ALS2Q96Q42 1657 aa12.22□□□□□ -0.45
SMC1A-205ENST00000469129 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
SMC1A-205ENST00000469129 FLT4P35916 1363 aa12.22□□□□□ -0.45
SMC1A-205ENST00000469129 FCHSD2O94868 740 aa12.22□□□□□ -0.45
SMC1A-205ENST00000469129 DUSP27Q5VZP5 1158 aa12.22□□□□□ -0.45
SMC1A-205ENST00000469129 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
SMC1A-205ENST00000469129 PHF23Q9BUL5 403 aaPredicted RBP12.22□□□□□ -0.45
SMC1A-205ENST00000469129 EMILIN1Q9Y6C2 1016 aa12.22□□□□□ -0.45
SMC1A-205ENST00000469129 RTL1A6NKG5 1358 aa12.21□□□□□ -0.45
SMC1A-205ENST00000469129 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
SMC1A-205ENST00000469129 IRX6P78412 446 aaPredicted RBP12.21□□□□□ -0.45
SMC1A-205ENST00000469129 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.45
SMC1A-205ENST00000469129 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
SMC1A-205ENST00000469129 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
SMC1A-205ENST00000469129 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
SMC1A-205ENST00000469129 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
SMC1A-205ENST00000469129 SLIT3O75094 1523 aa12.2□□□□□ -0.46
SMC1A-205ENST00000469129 NFAT5O94916 1531 aa12.2□□□□□ -0.46
SMC1A-205ENST00000469129 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
SMC1A-205ENST00000469129 TOM1O60784 492 aa12.19□□□□□ -0.46
SMC1A-205ENST00000469129 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
SMC1A-205ENST00000469129 C1orf167Q5SNV9 1468 aa12.19□□□□□ -0.46
SMC1A-205ENST00000469129 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
SMC1A-205ENST00000469129 IL16Q14005 1332 aa12.18□□□□□ -0.46
SMC1A-205ENST00000469129 IL13P35225 146 aa12.18□□□□□ -0.46
SMC1A-205ENST00000469129 RRS1Q15050 365 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms