RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 DLC1Q96QB1 1528 aa16.39■□□□□ 0.21
TRAIP-202ENST00000469027 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
TRAIP-202ENST00000469027 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
TRAIP-202ENST00000469027 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
TRAIP-202ENST00000469027 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
TRAIP-202ENST00000469027 SPATA31A1Q5TZJ5 1347 aa16.38■□□□□ 0.21
TRAIP-202ENST00000469027 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
TRAIP-202ENST00000469027 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
TRAIP-202ENST00000469027 PRDM11Q9NQV5 511 aa16.36■□□□□ 0.21
TRAIP-202ENST00000469027 CLTCL1P53675 1640 aa16.35■□□□□ 0.21
TRAIP-202ENST00000469027 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
TRAIP-202ENST00000469027 KIF1BO60333 1816 aa16.34■□□□□ 0.21
TRAIP-202ENST00000469027 APLP2Q06481 763 aa16.34■□□□□ 0.21
TRAIP-202ENST00000469027 HSPA6P17066 643 aa16.33■□□□□ 0.2
TRAIP-202ENST00000469027 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
TRAIP-202ENST00000469027 NRXN1Q9ULB1 1477 aa16.31■□□□□ 0.2
TRAIP-202ENST00000469027 TECPR2O15040 1411 aa16.31■□□□□ 0.2
TRAIP-202ENST00000469027 PLEKHH1Q9ULM0 1364 aa16.31■□□□□ 0.2
TRAIP-202ENST00000469027 SHANK3Q9BYB0 1731 aa16.31■□□□□ 0.2
TRAIP-202ENST00000469027 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
TRAIP-202ENST00000469027 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
TRAIP-202ENST00000469027 ARXQ96QS3 562 aa16.29■□□□□ 0.2
TRAIP-202ENST00000469027 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
TRAIP-202ENST00000469027 STK32BQ9NY57 414 aa16.29■□□□□ 0.2
TRAIP-202ENST00000469027 CHRNA2Q15822 529 aa16.28■□□□□ 0.2
TRAIP-202ENST00000469027 IFT172Q9UG01 1749 aa16.27■□□□□ 0.19
TRAIP-202ENST00000469027 PLSCR1O15162 318 aa16.26■□□□□ 0.19
TRAIP-202ENST00000469027 EVA1CP58658 441 aa16.26■□□□□ 0.19
TRAIP-202ENST00000469027 BARGINQ6ZT62 677 aa16.26■□□□□ 0.19
TRAIP-202ENST00000469027 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
TRAIP-202ENST00000469027 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
TRAIP-202ENST00000469027 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
TRAIP-202ENST00000469027 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
TRAIP-202ENST00000469027 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
TRAIP-202ENST00000469027 GPRASP1Q5JY77 1395 aa16.24■□□□□ 0.19
TRAIP-202ENST00000469027 KIAA0232Q92628 1395 aa16.24■□□□□ 0.19
TRAIP-202ENST00000469027 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
TRAIP-202ENST00000469027 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
TRAIP-202ENST00000469027 GPBP1L1Q9HC44 474 aaPredicted RBP16.23■□□□□ 0.19
TRAIP-202ENST00000469027 MAP3K5Q99683 1374 aa16.23■□□□□ 0.19
TRAIP-202ENST00000469027 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
TRAIP-202ENST00000469027 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
TRAIP-202ENST00000469027 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
TRAIP-202ENST00000469027 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
TRAIP-202ENST00000469027 TCP11L2Q8N4U5 519 aa16.22■□□□□ 0.19
TRAIP-202ENST00000469027 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
TRAIP-202ENST00000469027 ALS2Q96Q42 1657 aa16.21■□□□□ 0.19
TRAIP-202ENST00000469027 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
TRAIP-202ENST00000469027 PPLO60437 1756 aa16.21■□□□□ 0.19
TRAIP-202ENST00000469027 SLC15A2Q16348 729 aa16.21■□□□□ 0.19
TRAIP-202ENST00000469027 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
TRAIP-202ENST00000469027 SSH2Q76I76 1423 aa16.2■□□□□ 0.18
TRAIP-202ENST00000469027 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
TRAIP-202ENST00000469027 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
TRAIP-202ENST00000469027 SAFB2Q14151 953 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRAIP-202ENST00000469027 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
TRAIP-202ENST00000469027 ROCK1Q13464 1354 aa16.18■□□□□ 0.18
TRAIP-202ENST00000469027 COL13A1Q5TAT6 717 aaPredicted RBP16.18■□□□□ 0.18
TRAIP-202ENST00000469027 LARP1Q6PKG0 1096 aaKnown RBP16.18■□□□□ 0.18
TRAIP-202ENST00000469027 PROM2Q8N271 834 aa16.18■□□□□ 0.18
TRAIP-202ENST00000469027 CRYBG1Q9Y4K1 1723 aa16.18■□□□□ 0.18
TRAIP-202ENST00000469027 PRELPP51888 382 aa16.17■□□□□ 0.18
TRAIP-202ENST00000469027 TNS4Q8IZW8 715 aa16.17■□□□□ 0.18
TRAIP-202ENST00000469027 GOLGB1Q14789 3259 aaKnown RBP16.16■□□□□ 0.18
TRAIP-202ENST00000469027 SLC34A2O95436 690 aa16.16■□□□□ 0.18
TRAIP-202ENST00000469027 TXNRD1Q16881 649 aa16.16■□□□□ 0.18
TRAIP-202ENST00000469027 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
TRAIP-202ENST00000469027 ADGRF5Q8IZF2 1346 aa16.16■□□□□ 0.18
TRAIP-202ENST00000469027 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
TRAIP-202ENST00000469027 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
TRAIP-202ENST00000469027 PARP4Q9UKK3 1724 aaKnown RBP16.14■□□□□ 0.17
TRAIP-202ENST00000469027 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
TRAIP-202ENST00000469027 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
TRAIP-202ENST00000469027 ITGAEP38570 1179 aa16.14■□□□□ 0.17
TRAIP-202ENST00000469027 THRAP3Q9Y2W1 955 aaKnown RBP16.14■□□□□ 0.17
TRAIP-202ENST00000469027 ANKARQ7Z5J8 1434 aa16.13■□□□□ 0.17
TRAIP-202ENST00000469027 APLP1P51693 650 aa16.13■□□□□ 0.17
TRAIP-202ENST00000469027 PEAK1Q9H792 1746 aa16.12■□□□□ 0.17
TRAIP-202ENST00000469027 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
TRAIP-202ENST00000469027 POLD1P28340 1107 aa16.11■□□□□ 0.17
TRAIP-202ENST00000469027 DDB1Q16531 1140 aa16.11■□□□□ 0.17
TRAIP-202ENST00000469027 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
TRAIP-202ENST00000469027 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
TRAIP-202ENST00000469027 PHRF1Q9P1Y6 1649 aaKnown RBP16.1■□□□□ 0.17
TRAIP-202ENST00000469027 NLGN2Q8NFZ4 835 aa16.1■□□□□ 0.17
TRAIP-202ENST00000469027 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRAIP-202ENST00000469027 PRAM1Q96QH2 718 aa16.09■□□□□ 0.17
TRAIP-202ENST00000469027 ATP7BP35670 1465 aa16.09■□□□□ 0.17
TRAIP-202ENST00000469027 SIRT1Q96EB6 747 aa16.08■□□□□ 0.16
TRAIP-202ENST00000469027 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
TRAIP-202ENST00000469027 POGKQ9P215 609 aa16.07■□□□□ 0.16
TRAIP-202ENST00000469027 LRRC37A3O60309 1634 aa16.06■□□□□ 0.16
TRAIP-202ENST00000469027 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
TRAIP-202ENST00000469027 DNAJC5GQ8N7S2 189 aa16.05■□□□□ 0.16
TRAIP-202ENST00000469027 HIRIP3Q9BW71 556 aaPredicted RBP16.05■□□□□ 0.16
TRAIP-202ENST00000469027 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
TRAIP-202ENST00000469027 CRB1P82279 1406 aa16.02■□□□□ 0.16
TRAIP-202ENST00000469027 EIF3AQ14152 1382 aaKnown RBP16.02■□□□□ 0.16
TRAIP-202ENST00000469027 ANKRD30BQ9BXX2 1392 aa16.02■□□□□ 0.16
TRAIP-202ENST00000469027 PRR36Q9H6K5 1346 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms