RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 FBXO45P0C2W1 286 aa13.17□□□□□ -0.3
ITGA4-205ENST00000468948 ATP9BO43861 1147 aa13.16□□□□□ -0.3
ITGA4-205ENST00000468948 JUNDP17535 347 aa13.16□□□□□ -0.3
ITGA4-205ENST00000468948 BCAMP50895 628 aa13.16□□□□□ -0.3
ITGA4-205ENST00000468948 THAP11Q96EK4 314 aa13.16□□□□□ -0.3
ITGA4-205ENST00000468948 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
ITGA4-205ENST00000468948 TSR3Q9UJK0 312 aaKnown RBP13.16□□□□□ -0.3
ITGA4-205ENST00000468948 ATG7O95352 703 aa13.15□□□□□ -0.3
ITGA4-205ENST00000468948 BRD1O95696 1058 aa13.15□□□□□ -0.3
ITGA4-205ENST00000468948 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
ITGA4-205ENST00000468948 TMCO4Q5TGY1 634 aa13.15□□□□□ -0.3
ITGA4-205ENST00000468948 MAP10Q9P2G4 905 aa13.15□□□□□ -0.3
ITGA4-205ENST00000468948 CARNS1A5YM72 827 aa13.14□□□□□ -0.31
ITGA4-205ENST00000468948 CTHP32929 405 aa13.14□□□□□ -0.31
ITGA4-205ENST00000468948 PTPRNQ16849 979 aa13.14□□□□□ -0.31
ITGA4-205ENST00000468948 KCNA1Q09470 495 aa13.13□□□□□ -0.31
ITGA4-205ENST00000468948 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
ITGA4-205ENST00000468948 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
ITGA4-205ENST00000468948 WNT2BQ93097 391 aa13.12□□□□□ -0.31
ITGA4-205ENST00000468948 VRTNQ9H8Y1 702 aa13.11□□□□□ -0.31
ITGA4-205ENST00000468948 PIK3CDO00329 1044 aa13.09□□□□□ -0.31
ITGA4-205ENST00000468948 MSS51Q4VC12 460 aa13.07□□□□□ -0.32
ITGA4-205ENST00000468948 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
ITGA4-205ENST00000468948 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
ITGA4-205ENST00000468948 CCNYL3P0C7X3 344 aa13.06□□□□□ -0.32
ITGA4-205ENST00000468948 SKIP12755 728 aa13.06□□□□□ -0.32
ITGA4-205ENST00000468948 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
ITGA4-205ENST00000468948 ARMC2Q8NEN0 867 aa13.06□□□□□ -0.32
ITGA4-205ENST00000468948 EVA1BQ9NVM1 165 aa13.06□□□□□ -0.32
ITGA4-205ENST00000468948 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
ITGA4-205ENST00000468948 FAM160A2Q8N612 972 aaPredicted RBP13.05□□□□□ -0.32
ITGA4-205ENST00000468948 SPSB2Q99619 263 aa13.05□□□□□ -0.32
ITGA4-205ENST00000468948 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
ITGA4-205ENST00000468948 DXOO77932 396 aaKnown RBP13.04□□□□□ -0.32
ITGA4-205ENST00000468948 PTK2Q05397 1052 aa13.04□□□□□ -0.32
ITGA4-205ENST00000468948 KCNH2Q12809 1159 aa13.04□□□□□ -0.32
ITGA4-205ENST00000468948 NUDT12Q9BQG2 462 aa13.04□□□□□ -0.32
ITGA4-205ENST00000468948 USP17L3A6NCW0 530 aa13.03□□□□□ -0.32
ITGA4-205ENST00000468948 USP17L4A6NCW7 530 aa13.03□□□□□ -0.32
ITGA4-205ENST00000468948 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
ITGA4-205ENST00000468948 USP17L2Q6R6M4 530 aa13.03□□□□□ -0.32
ITGA4-205ENST00000468948 USP17L1Q7RTZ2 530 aa13.03□□□□□ -0.32
ITGA4-205ENST00000468948 GPSM3Q9Y4H4 160 aa13.03□□□□□ -0.32
ITGA4-205ENST00000468948 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.33
ITGA4-205ENST00000468948 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 MMP16P51512 607 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 COPS2P61201 443 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 ELOAQ14241 798 aaKnown RBP13.01□□□□□ -0.33
ITGA4-205ENST00000468948 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 FAM174AQ8TBP5 190 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 ZNF592Q92610 1267 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
ITGA4-205ENST00000468948 PCDHB9Q9Y5E1 797 aa13□□□□□ -0.33
ITGA4-205ENST00000468948 MCCD1P59942 119 aaPredicted RBP12.99□□□□□ -0.33
ITGA4-205ENST00000468948 SLFNL1Q499Z3 407 aa12.99□□□□□ -0.33
ITGA4-205ENST00000468948 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
ITGA4-205ENST00000468948 DEPDC4Q8N2C3 294 aa12.99□□□□□ -0.33
ITGA4-205ENST00000468948 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
ITGA4-205ENST00000468948 MTMR7Q9Y216 660 aa12.99□□□□□ -0.33
ITGA4-205ENST00000468948 NOVA2Q9UNW9 492 aaKnown RBP12.98□□□□□ -0.33
ITGA4-205ENST00000468948 IVNS1ABPQ9Y6Y0 642 aa12.98□□□□□ -0.33
ITGA4-205ENST00000468948 OCSTAMPQ9BR26 566 aa12.97□□□□□ -0.33
ITGA4-205ENST00000468948 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
ITGA4-205ENST00000468948 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
ITGA4-205ENST00000468948 TMEM164Q5U3C3 297 aa12.95□□□□□ -0.34
ITGA4-205ENST00000468948 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
ITGA4-205ENST00000468948 RNF135Q8IUD6 432 aa12.95□□□□□ -0.34
ITGA4-205ENST00000468948 ARHGAP9Q9BRR9 750 aa12.95□□□□□ -0.34
ITGA4-205ENST00000468948 STK32AQ8WU08 396 aa12.94□□□□□ -0.34
ITGA4-205ENST00000468948 ADH1BP00325 375 aa12.93□□□□□ -0.34
ITGA4-205ENST00000468948 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
ITGA4-205ENST00000468948 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
ITGA4-205ENST00000468948 THSD4Q6ZMP0 1018 aa12.93□□□□□ -0.34
ITGA4-205ENST00000468948 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
ITGA4-205ENST00000468948 PHTF2Q8N3S3 785 aa12.93□□□□□ -0.34
ITGA4-205ENST00000468948 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
ITGA4-205ENST00000468948 PLPP7Q8NBV4 271 aa12.93□□□□□ -0.34
ITGA4-205ENST00000468948 ADAM32Q8TC27 787 aa12.93□□□□□ -0.34
ITGA4-205ENST00000468948 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L10C9JJH3 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L21D6R901 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 TLL1O43897 1013 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 ZPR1O75312 459 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 NCOA4Q13772 614 aa12.92□□□□□ -0.34
ITGA4-205ENST00000468948 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
ITGA4-205ENST00000468948 LZTS3O60299 673 aaPredicted RBP12.91□□□□□ -0.34
ITGA4-205ENST00000468948 RASA1P20936 1047 aa12.91□□□□□ -0.34
ITGA4-205ENST00000468948 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
ITGA4-205ENST00000468948 UNC93B1Q9H1C4 597 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms